Contig 012669:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024K10Sequence675000753 (2)ref|XP_009797192.1|1e-115PREDICTED: WAT1-related protein At3g18200 [Nicotiana sylvestris]192012669 (3)
JMSF025K10Sequence186012669 (3)
JMSF032L12Sequence658000753 (2)ref|XP_009797192.1|6e-111PREDICTED: WAT1-related protein At3g18200 [Nicotiana sylvestris]217012669 (3)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025K10+                                                       TTTTTTTNTCAATNA
rJMSF024K10+                                                       TTTTTTTTTCAATAA
rJMSF032L12+                                CCTTTTTTTTTTTTTTAAGGATTTTTTTTTTTCAATAA
                      ____________________________________________________________
consensus                                   CCTTTTTTTTTTTTTTAAGGATTTTTTTTTTTCAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025K10+          ACNAAATCAAGGTCANCAGTACTGCAAAATCATTGAAGAGAAGCCCCTTTCAGTATTATG
rJMSF024K10+          ACTAAATCAAGGTCAACAGTACTGCAAAATCATTGAAGAGAAGCCCCTTTCAGTATTATG
rJMSF032L12+          ACTAAATCAAGGTCAACAGTACTGCAAAATCATTGAAGAGAAGCCCCTTTCAGTATTATG
                      ____________________________________________________________
consensus             ACTAAATCAAGGTCAACAGTACTGCAAAATCATTGAAGAGAAGCCCCTTTCAGTATTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025K10+          ATGGTCTGGTTTGGTCGTTTCCAAGGTT-AACAGTNCTGACCAGTTTGAGCTGGAGAAAG
rJMSF024K10+          A-GGTCTGGTTTGGTCGTTTCCAAGGTT-AACAGTACTGACCAGTTTGAGCTGGAGAAAG
rJMSF032L12+          A-GGTCTGGTTTGGTCGTTTCCAAGGTTAAACAGTACTGACCAGTTTGAGCTGGAGAAAG
                      ____________________________________________________________
consensus             A-GGTCTGGTTTGGTCGTTTCCAAGGTT-AACAGTACTGACCAGTTTGAGCTGGAGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025K10+          TGTGGCTTTTGACCAGTAAATGGA                                    
rJMSF024K10+          TGTGGCTTTTGACCAGTAAATGGA                                    
rJMSF032L12+          TGTGGCTTTTGACCAGTAAATGGANGGANACCTACCTNTTTAANGTANAATACTACTCTG
                      ____________________________________________________________
consensus             TGTGGCTTTTGACCAGTAAATGGANGGANACCTACCTNTTTAANGTANAATACTACTCTG