Contig 012665:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O15Sequence436010645 (12)gb|EPS70365.1|7e-30hypothetical protein M569_04393, partial [Genlisea aurea]774012665 (3)ref|XP_006352935.1|1e-104PREDICTED: protein TOPLESS-like isoform X1 [Solanum tuberosum]
JMSF032D21Sequence727010645 (12)gb|EPS70365.1|1e-109hypothetical protein M569_04393, partial [Genlisea aurea]725012665 (3)gb|ABG29319.1|3e-78Beta transducin-like protein, putative [Solanum bulbocastanum]
JMSF039L11Sequence677010645 (12)gb|EPS70365.1|1e-98hypothetical protein M569_04393, partial [Genlisea aurea]898012665 (3)ref|XP_009597375.1|2e-124PREDICTED: topless-related protein 1-like isoform X4 [Nicotiana tomentosiformis

Alignment

This contig is upended


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rJMSF039L11+                              TATTTGGCATTTCACCCGCAGGACAATAACATTATTGCTG
                      ____________________________________________________________
consensus                                 TATTTGGCATTTCACCCGCAGGACAATAACATTATTGCTG
 
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rJMSF039L11+          TTGGAATGGAAGACTCAANCCATACAAATATACAATGTCAGGGTTGATGAGGTTAAAACT
                      ____________________________________________________________
consensus             TTGGAATGGAAGACTCAANCCATACAAATATACAATGTCAGGGTTGATGAGGTTAAAACT
 
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rJMSF039L11+          AAGCTCAAGGGTCACCAGAAACGGATCACAGGGCTTGCATTTTCTCAGAGCTTGAATGTG
rJMSF016O15+                                                  TTTCTCAGAGCTTGAATGTG
                      ____________________________________________________________
consensus             AAGCTCAAGGGTCACCAGAAACGGATCACAGGGCTTGCATTTTCTCAGAGCTTGAATGTG
 
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rJMSF039L11+          CTGGTGTCTTCGGGGGCTGATGCACAGCTATGTATCTGGAACATTGATGGATGGGAAAAG
rJMSF016O15+          CTGGTGTCTTCGGGGGCTGATGCACAGCTATGTATCTGGAACATTGATGGATGGGAAAAG
                      ____________________________________________________________
consensus             CTGGTGTCTTCGGGGGCTGATGCACAGCTATGTATCTGGAACATTGATGGATGGGAAAAG
 
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rJMSF039L11+          AAAAAGGCGAGGCTCGTACAGGCACCTCCTGGACACCCTACTCCCCTTGTTGGAGAAGCT
rJMSF016O15+          AAAAAGGCGAGGCTCGTACAGGCACCTCCTGGACACCCTACTCCCCTTGTTGGAGAAGCT
rJMSF032D21+                                                                 AAGCT
                      ____________________________________________________________
consensus             AAAAAGGCGAGGCTCGTACAGGCACCTCCTGGACACCCTACTCCCCTTGTTGGAGAAGCT
 
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rJMSF039L11+          AGAGTTCAATTCCATAATGATCAATCTCACATTCTTGTAGTTCATGAAAGCCAAATTGCG
rJMSF016O15+          AGAGTTCAATTCCATAATGATCAATCTCACATTCTTGTAGTTCATGAAAGCCAAATTGCG
rJMSF032D21+          AGAGTTCAATTCCATAATGATCAATCTCACATTCTNGTAGTTCATGAAAGCCAAATTGCG
                      ____________________________________________________________
consensus             AGAGTTCAATTCCATAATGATCAATCTCACATTCTTGTAGTTCATGAAAGCCAAATTGCG
 
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rJMSF039L11+          ATTTATGATACCCAACTCGAATGTCTGCGTTCATGGTATCCAAGGGACTCACTTTCTGCT
rJMSF016O15+          ATTTATGATACCCAACTCGAATGTCTGCGTTCATGGTATCCAAGGGACTCACTTTCTGCT
rJMSF032D21+          ATTTATGATACCCAACTCGAATGTCTGCGTTCATGGTATCCAAGGGACTCACTTTCTGCT
                      ____________________________________________________________
consensus             ATTTATGATACCCAACTCGAATGTCTGCGTTCATGGTATCCAAGGGACTCACTTTCTGCT
 
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rJMSF039L11+          CCTATATCAAGTGCAATATATTCGTGTGATGGTATGTTGGTGTTTGCTGGTTTCTCCGAT
rJMSF016O15+          CCTATATCAAGTGCAATATATTCGTGTGATGGTATGTTGGTGTTTGCTGGTTTCTCCGAT
rJMSF032D21+          CCTATATCAAGTGCAATATATTCGTGTGATGGTATGTTGGTGTTTGCTGGTTTCTCCGAT
                      ____________________________________________________________
consensus             CCTATATCAAGTGCAATATATTCGTGTGATGGTATGTTGGTGTTTGCTGGTTTCTCCGAT
 
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rJMSF039L11+          GGAGCAATTGGAATATTTGATGCAGACAGTTTCAGGCTTCGGTGTCGAATTGCAGCATCT
rJMSF016O15+          GGAGCAATTGGAATATTTGATGCAGACAGTTTCAGGCTTCGGTGTCGAATTGCAGCATCT
rJMSF032D21+          GGAGCAATTGGAATATTTGATGCAGACAGTTTCAGGCTTCGGTGTCGAATTGCAGCATCT
                      ____________________________________________________________
consensus             GGAGCAATTGGAATATTTGATGCAGACAGTTTCAGGCTTCGGTGTCGAATTGCAGCATCT
 
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rJMSF039L11+          GCTTATATTTCTTCGTCTATTGGCAGCAGCAGTGGTTCTGCCTTTCCCGTAGTGATTGCT
rJMSF016O15+          GCTTATATTTCTTCGTCTATTGGCAGCAGCAGTGGTTCTGCCTTTCCCGTAGTGATTGCT
rJMSF032D21+          GCTTATATTTCTTCGTCTATTGGCAGCAGCAGTGGTTCTGCCTTTCCCGTAGTGATTGCT
                      ____________________________________________________________
consensus             GCTTATATTTCTTCGTCTATTGGCAGCAGCAGTGGTTCTGCCTTTCCCGTAGTGATTGCT
 
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rJMSF039L11+          GCACACCCTTCTGATGCAAACCAATTCGCGCTGGGCATGAACGATGGTTCGGTAAATGTG
rJMSF016O15+          GCACACCCTTCTGATGCAAACCAATTCGCGCTGGGCATGAACGATGGTTCGGTAAATGTG
rJMSF032D21+          GCACACCCTTCTGATGCAAACCAATTCGCGCTGGGCATGAACGATGGTTCGGTAAATGTG
                      ____________________________________________________________
consensus             GCACACCCTTCTGATGCAAACCAATTCGCGCTGGGCATGAACGATGGTTCGGTAAATGTG
 
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rJMSF039L11+          ATTGAGCCATCAGACGCGGAGCCAAAGTGGGGCAGTTCGACCTCCCAAGATAACGGATCT
rJMSF016O15+          ATTGAGCCATCAGACGCGGAGCCAAAGTGGGGCAGTTCGACCTCCCAAGATAACGGATCT
rJMSF032D21+          ATTGAGCCATCAGACGCGGAGCCAAAGTGGGGCAGTTCGACCTCCCAAGATAACGGATCT
                      ____________________________________________________________
consensus             ATTGAGCCATCAGACGCGGAGCCAAAGTGGGGCAGTTCGACCTCCCAAGATAACGGATCT
 
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rJMSF039L11+          GTACCTTCGATTCCCTCAAGTTCGGCGTTGAATAGTCAGCCATCCGAAACTGGTTCTAGG
rJMSF016O15+          GTACCTTCGATTCCCTCAAGTTCGGCGTTGAATAGTCAGCCATCCGAAACTGGTTCTAGG
rJMSF032D21+          GTACCTTCGATTCCCTCAAGTTCGGCGTTGAATAGTCAGCCATCCGAAACTGGTTCTAGG
                      ____________________________________________________________
consensus             GTACCTTCGATTCCCTCAAGTTCGGCGTTGAATAGTCAGCCATCCGAAACTGGTTCTAGG
 
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rJMSF039L11+          TGATAGTTGTTCTACAAAAGGTTTTGTTTCTGCAACTAGGGTGCTCAACTGGTTCTTTAA
rJMSF016O15+          TGATAGTTGTTCTACAAAAGGTTTTGTTTCTGCAACTAGGGTGCTCAACTGGTTCTTTAA
rJMSF032D21+          TGATAGTTGTTCTACAAAAGGTTTTGTTTCTGCAACTAGGGTGCTCAACTGGTTCTTTAA
                      ____________________________________________________________
consensus             TGATAGTTGTTCTACAAAAGGTTTTGTTTCTGCAACTAGGGTGCTCAACTGGTTCTTTAA
 
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rJMSF039L11+          TGTAAAGTTACATAATGCCTAATTCTTTTTCCTCTTTTGACAATTCTTTTGGACTTCTCT
rJMSF016O15+          TGTAAAGTTACATAATGCCTAATTCTTTTTCCTCTTTTGACAATTCTTTTGGACTTCTCT
rJMSF032D21+          TGTAAAGTTACATAATGCCTAATTCTTTTTCCTCTTTTGACAATTCTTTTGGACTTCTCT
                      ____________________________________________________________
consensus             TGTAAAGTTACATAATGCCTAATTCTTTTTCCTCTTTTGACAATTCTTTTGGACTTCTCT
 
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rJMSF039L11+          GTACATTTATGCCCCAAC                                          
rJMSF016O15+          GTACATTTATGCCCCAACCTAGT                                     
rJMSF032D21+          GTACATTTATGCCCCAACCTAGTTGCCAAGCCTCACCTTCCATATTTAAAGGTTAACAAC
                      ____________________________________________________________
consensus             GTACATTTATGCCCCAACCTAGTTGCCAAGCCTCACCTTCCATATTTAAAGGTTAACAAC
 
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rJMSF032D21+          CCTTGCTCTTTGTTCTGTTTGATTGGTGTAGGAATTAGGATAGACAATATAATATTCACT
                      ____________________________________________________________
consensus             CCTTGCTCTTTGTTCTGTTTGATTGGTGTAGGAATTAGGATAGACAATATAATATTCACT