Contig 012659:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+                                                  AAAGAAGGATATGCCAAACA
                      ____________________________________________________________
consensus                                                     AAAGAAGGATATGCCAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          TCTCTACATTTGCAACACTTAGTCCTATCCCTGGTTACATGCAATGGCTTCTGTCTAAGT
                      ____________________________________________________________
consensus             TCTCTACATTTGCAACACTTAGTCCTATCCCTGGTTACATGCAATGGCTTCTGTCTAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          TGGCTTCTTCCGAGAGATCTGGTTCTGCTTTTAGAGAGAACTTACTTGAGCCAGATGAAG
rJMSF030F14+                                       TTTAGAGAGAACTTACCTGAGCCAGATGAAG
                      ____________________________________________________________
consensus             TGGCTTCTTCCGAGAGATCTGGTTCTGCTTTTAGAGAGAACTTACTTGAGCCAGATGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          AAACAGCAATTTTAAATGCATCAGGAGAATCCGGTACAGGAAGAAGTGGTATGGAAGTAA
rJMSF030F14+          AAACAGCAATTTTAAATGCATCAGGAGAATCCGGTACAGGAAGAAGTGGTATGGAAGTAA
                      ____________________________________________________________
consensus             AAACAGCAATTTTAAATGCATCAGGAGAATCCGGTACAGGAAGAAGTGGTATGGAAGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          TGCAGAATCTGTTGGCATCAAAGGACCATGAGTGGACTAATTCAGAGATGTTGGTATCTG
rJMSF030F14+          TGCAGAATCTGTTGGCATCAAAGGACCATGAGTGGACTAATTCAGAGATGTTGGTATCTG
                      ____________________________________________________________
consensus             TGCAGAATCTGTTGGCATCAAAGGACCATGAGTGGACTAATTCAGAGATGTTGGTATCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          TGCTTAGAATCCCTCTAATGCGACTTTGTGCCAGGTACCTTCTAAACGAGAAGAAGAGAG
rJMSF030F14+          TGCTTAGAATCCCTCTAATGCGACTTTGTGCCAGGTACCTTCTAAACGAGAAGAAGAGAG
                      ____________________________________________________________
consensus             TGCTTAGAATCCCTCTAATGCGACTTTGTGCCAGGTACCTTCTAAACGAGAAGAAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          GGAAAGCTCTAGACTCTGTTGCCAATTTCCACTTACAGAATGGCGCAATGGTTGGAAGAC
rJMSF030F14+          GGAAAGCTCTAGACTCTGTTGCCAATTTCCACTTACAGAATGGCGCAATGGTTGGAAGAC
                      ____________________________________________________________
consensus             GGAAAGCTCTAGACTCTGTTGCCAATTTCCACTTACAGAATGGCGCAATGGTTGGAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          TGAATTGGATGTCTGACAAATCAGAGAAGGGCCTTCATCAGAGTGGTGGAATAATGGTAA
rJMSF030F14+          TGAATTGGATGTCTGACAAATCAGAGAAGGGCCTTCATCAGAGTGGTGGAATAATGGTAA
                      ____________________________________________________________
consensus             TGAATTGGATGTCTGACAAATCAGAGAAGGGCCTTCATCAGAGTGGTGGAATAATGGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          ATTACATATACAGTCTGGAGAATATTGAAGAAAATGGCCAGTCATATATGAGTGGAGGCC
rJMSF030F14+          ATTACATATACAGTCTGGAGAATATTGAAGAAAATGGCCAGTCATATATGAGTGGAGGCC
                      ____________________________________________________________
consensus             ATTACATATACAGTCTGGAGAATATTGAAGAAAATGGCCAGTCATATATGAGTGGAGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          ATATCCAAGCATCCTCCGATGTCAAAAACTATGTTGGGGTGCAGTGTGATCATGAAAGAG
rJMSF030F14+          ATATCCAAGCATCCTCCGATGTCAAAAACTATGTTGGGGTGCAGTGTGATCATGAAAGAG
                      ____________________________________________________________
consensus             ATATCCAAGCATCCTCCGATGTCAAAAACTATGTTGGGGTGCAGTGTGATCATGAAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          GAATGGGTTAGAACTATATGGCTATATTAGTAATTTTGTCTGTAAATTTGAAAACTCTTA
rJMSF030F14+          GAATGGGTTAGAACTATATGGCTATATTAGTAATTTTGTCTGTAAATTTGAAAACTCTTA
                      ____________________________________________________________
consensus             GAATGGGTTAGAACTATATGGCTATATTAGTAATTTTGTCTGTAAATTTGAAAACTCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K21+          AAAATTTCTGTCCATTTTCAATCTCTCTTATT                            
rJMSF030F14+          AAAATTTCTGTCCATTTTCAATCTCTCTTATTTGAGAAAGAGTTGCATTTTCTAACTGCA
                      ____________________________________________________________
consensus             AAAATTTCTGTCCATTTTCAATCTCTCTTATTTGAGAAAGAGTTGCATTTTCTAACTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030F14+          TATATCCTTTTTGGAATTGTATTCCTCTTATTTGTTCTCGTAGTGCCAAATGCAATTACT
                      ____________________________________________________________
consensus             TATATCCTTTTTGGAATTGTATTCCTCTTATTTGTTCTCGTAGTGCCAAATGCAATTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030F14+          TTTCCAGTTCACAACTAAAAGAAGTATCAAAGATTCAAAGTCCATAGAACTCAAAAATGA
                      ____________________________________________________________
consensus             TTTCCAGTTCACAACTAAAAGAAGTATCAAAGATTCAAAGTCCATAGAACTCAAAAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030F14+          ATGTAAGATCCTATGGCCATCTTATTTACAGCAGTGTTGTATTGTTGTAACAGAAAAACC
                      ____________________________________________________________
consensus             ATGTAAGATCCTATGGCCATCTTATTTACAGCAGTGTTGTATTGTTGTAACAGAAAAACC