Contig 012657:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS104E03Sequence614012657 (2)ref|XP_007211790.1|1e-13hypothetical protein PRUPE_ppa006340mg [Prunus persica] gb|EMJ12989.1| hypotheti
JMSF030A23Sequence546018948759012657 (2)gb|AII80417.1|6e-40RING-type E3 ubiquitin ligase [Vitis vinifera]

Alignment

This contig is upended


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JMFS104E03-               ACGTTTCTTGGTTTTGTTGTGAAATAACTTTCATGAAAAGACGATTTGGACTTTGG
                      ____________________________________________________________
consensus                 ACGTTTCTTGGTTTTGTTGTGAAATAACTTTCATGAAAAGACGATTTGGACTTTGG
 
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JMFS104E03-           AGGAAACTATTGATACTTTATGTTATCGGCACTGGTATTGCCATTCAAGAAGTTGAATGC
                      ____________________________________________________________
consensus             AGGAAACTATTGATACTTTATGTTATCGGCACTGGTATTGCCATTCAAGAAGTTGAATGC
 
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JMFS104E03-           AGAAAAAAGGAGATGTCATTGACATGATTCATGAGAAGAGACTCGAGAGTAGAGGGTATA
                      ____________________________________________________________
consensus             AGAAAAAAGGAGATGTCATTGACATGATTCATGAGAAGAGACTCGAGAGTAGAGGGTATA
 
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JMFS104E03-           GTTACTGTGTCCTTAAATCAGGAGTATCCTCGTCGTCCAATTCATTCCACTTGCTTCTGT
                      ____________________________________________________________
consensus             GTTACTGTGTCCTTAAATCAGGAGTATCCTCGTCGTCCAATTCATTCCACTTGCTTCTGT
 
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JMFS104E03-           GACCCAGAAATGAATCTTTCTTATTCTGCGATTCAGATGTTATTGTCTGAATGTATAAGC
                      ____________________________________________________________
consensus             GACCCAGAAATGAATCTTTCTTATTCTGCGATTCAGATGTTATTGTCTGAATGTATAAGC
 
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JMFS104E03-           ATTCTTTGTTATTCTGATTCGTGATTTTTGAACAGGGATGATGAATTTGACTTGGATCTC
rJMSF030A23+                                          CAGGGATGATGAATTTGACTTGGATCTC
                      ____________________________________________________________
consensus             ATTCTTTGTTATTCTGATTCGTGATTTTTGAACAGGGATGATGAATTTGACTTGGATCTC
 
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JMFS104E03-           GAGGACATAATGATTATGGAAGCTATATGGCTATCTATTCAGGAGAATGGCAAGCCTCAA
rJMSF030A23+          GAGGACATAATGATTATGGAAGCTATATGGCTATCTATTCAGGAGAATGGCAAGCCTCAA
                      ____________________________________________________________
consensus             GAGGACATAATGATTATGGAAGCTATATGGCTATCTATTCAGGAGAATGGCAAGCCTCAA
 
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JMFS104E03-           ACTCCAGGCTATCGTGTTTTGGCTCCACCAGAACAATATGTAAGTCACGGTAACCATGCA
rJMSF030A23+          ACTCCAGGCTATCGTGTTTTGGCTCCACCAGAACAATATGTAAGTCACGATAACCATGCA
                      ____________________________________________________________
consensus             ACTCCAGGCTATCGTGTTTTGGCTCCACCAGAACAATATGTAAGTCACGGTAACCATGCA
 
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JMFS104E03-           TCCTCCATGGCCTCAGCGGGAGGATCTTCATCTTCCCCTTCTGGAGGTCTTGCTTGCGCG
rJMSF030A23+          TCCTCCATGGCCTCAGCGGGAGGATCTTCATCTTCCCCTTCTGGAGGTCTTGCTTGCGCG
                      ____________________________________________________________
consensus             TCCTCCATGGCCTCAGCGGGAGGATCTTCATCTTCCCCTTCTGGAGGTCTTGCTTGCGCG
 
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JMFS104E03-           ATTGCAGCCCTTGCTGAGCGCCAGCAGATGGGCAAAGAGTCGTCCAGTAGTTATAGCGGA
rJMSF030A23+          ATTGCAGCCCTTGCTGAGCGCCAGCAGATGGGCAAAGAGTCGTCCAGTAGTTATAGCGGA
                      ____________________________________________________________
consensus             ATTGCAGCCCTTGCTGAGCGCCAGCAGATGGGCAAAGAGTCGTCCAGTAGTTATAGCGGA
 
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JMFS104E03-           GGCGTATCATCTTCATAC                                          
rJMSF030A23+          GGCGTATCATCTTCATACAATCACCATTCTGCCTGCAGCAGATCTCCGGATAGGGCGGTG
                      ____________________________________________________________
consensus             GGCGTATCATCTTCATACAATCACCATTCTGCCTGCAGCAGATCTCCGGATAGGGCGGTG
 
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rJMSF030A23+          CAAGAAGAGAACGAAGATTACCCTCAGAGCGAGATGCCAATGGATGGGGAAGACAGGGAA
                      ____________________________________________________________
consensus             CAAGAAGAGAACGAAGATTACCCTCAGAGCGAGATGCCAATGGATGGGGAAGACAGGGAA
 
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rJMSF030A23+          TGGGCTGACAATGGTTCATCGAGGGGTGAAGCGGGAACTGGCTATGCTGCCTCGGATGAT
                      ____________________________________________________________
consensus             TGGGCTGACAATGGTTCATCGAGGGGTGAAGCGGGAACTGGCTATGCTGCCTCGGATGAT
 
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rJMSF030A23+          GTGGGCCAGGATCCCCCTCGAGGTGAAACTGAGAGAGACGGCTTTCAGCCCGTCTCGGGG
                      ____________________________________________________________
consensus             GTGGGCCAGGATCCCCCTCGAGGTGAAACTGAGAGAGACGGCTTTCAGCCCGTCTCGGGG
 
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rJMSF030A23+          CCCATCGTTCCAGAAAGTTTTGAAGAACAGATGATGCTAGCCATGGCTGTCTCACTTGCA
                      ____________________________________________________________
consensus             CCCATCGTTCCAGAAAGTTTTGAAGAACAGATGATGCTAGCCATGGCTGTCTCACTTGCA
 
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rJMSF030A23+          GACTCACAAGCAAGGACAAATGCACCAGAAGCATGGCACTAGCACTTAATATAAGCTACT
                      ____________________________________________________________
consensus             GACTCACAAGCAAGGACAAATGCACCAGAAGCATGGCACTAGCACTTAATATAAGCTACT
 
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rJMSF030A23+          TAGGATTCAACCATGTTACTGTTTTTATTTTATTTTTATTTTTATTTTTTTCTCCCTTTC
                      ____________________________________________________________
consensus             TAGGATTCAACCATGTTACTGTTTTTATTTTATTTTTATTTTTATTTTTTTCTCCCTTTC
 
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rJMSF030A23+          CCTGCTCTGCTACCCTTATTCTGATGTAGAAGAAATGGAATCCTCTTTTTATTTCCTTTT
                      ____________________________________________________________
consensus             CCTGCTCTGCTACCCTTATTCTGATGTAGAAGAAATGGAATCCTCTTTTTATTTCCTTTT