Contig 012655:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029H14Sequence160015773776012655 (2)ref|XP_007027193.1|2e-96Kinase superfamily protein isoform 1 [Theobroma cacao] gb|EOY07695.1| Kinase sup
JMSF036G04Sequence589017895ref|XP_010253451.1|4e-50PREDICTED: serine/threonine-protein kinase PBS1-like [Nelumbo nucifera]731012655 (2)ref|XP_007027193.1|3e-85Kinase superfamily protein isoform 1 [Theobroma cacao] gb|EOY07695.1| Kinase sup

Alignment

This contig is upended


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rJMSF036G04+                                                         GGGTACTTATGGA
rJMSF029H14+              TGGGGCCTGTAGGAGACAATACGCATGTGTCTACCAGGGTTATGGGTACTTATGGA
                      ____________________________________________________________
consensus                 TGGGGCCTGTAGGAGACAATACGCATGTGTCTACCAGGGTTATGGGTACTTATGGA
 
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rJMSF036G04+          TATTGCGCTCCCGAATATGCTATGACGGGACAGTTGACTGTAAAGTCAGATGTTTACAGC
rJMSF029H14+          TATTGCGCTCCCGAATATGCTATGACGGGACAGTTGACTGTAAAGTCAGATGTTTACAGC
                      ____________________________________________________________
consensus             TATTGCGCTCCCGAATATGCTATGACGGGACAGTTGACTGTAAAGTCAGATGTTTACAGC
 
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rJMSF036G04+          TTCGGGGTTGTACTTTTGGAAATCATCACGGGAAAGAGAGCAATCGAAAACTCAAAAGTT
rJMSF029H14+          TTCGGGGTTGTACTTTTGGAAATCATCACGGGAAAGAGAGCAATCGAAAACTCAAAAGTT
                      ____________________________________________________________
consensus             TTCGGGGTTGTACTTTTGGAAATCATCACGGGAAAGAGAGCAATCGAAAACTCAAAAGTT
 
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rJMSF036G04+          GGTGGGGAGCAGAACCTTGTTTCATGGGCAAGACCTTTATTCAAAGACCGGAAGAAGTTC
rJMSF029H14+          GGTGGGGAGCAGAACCTTGTTTCATGGGCAAGACCTTTATTCAAAGACCGGAAGAAGTTC
                      ____________________________________________________________
consensus             GGTGGGGAGCAGAACCTTGTTTCATGGGCAAGACCTTTATTCAAAGACCGGAAGAAGTTC
 
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rJMSF036G04+          AAGCAGATGGCTGATCCAATGCTGCAAGGTCAATACCCGTTAAGGGGCTTGTATCAAGCT
rJMSF029H14+          AAGCAGATGGCTGATCCAATGCTGCAAGGTCAATACCCGTTAAGGGGCTTGTATCAAGCT
                      ____________________________________________________________
consensus             AAGCAGATGGCTGATCCAATGCTGCAAGGTCAATACCCGTTAAGGGGCTTGTATCAAGCT
 
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rJMSF036G04+          CTTGCAGTAGCAGCAATGTGCGTTCAAGAGCAGCCCAACATGCGCCCCGCCATAGCAGAT
rJMSF029H14+          CTTGCAGTAGCAGCAATGTGCGTTCAAGAGCAGCCCAACATGCGCCCCGCCATAGCAGAT
                      ____________________________________________________________
consensus             CTTGCAGTAGCAGCAATGTGCGTTCAAGAGCAGCCCAACATGCGCCCCGCCATAGCAGAT
 
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rJMSF036G04+          GTCGTTACAGCTCTTAGTTACCTGGCTTCACAAAAGTTCGACCCCGAGTCCCAAGCAGCT
rJMSF029H14+          GTCGTTACAGCTCTTAGTTACCTGGCTTCACAAAAGTTCGACCCCGAGTCCCAAGCAGCT
                      ____________________________________________________________
consensus             GTCGTTACAGCTCTTAGTTACCTGGCTTCACAAAAGTTCGACCCCGAGTCCCAAGCAGCT
 
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rJMSF036G04+          CAGAACAAACGCTGGTCACCTGCGGCTTCACCTCGAGCGAAGAAAGATTGTGATAAGAAA
rJMSF029H14+          CAGAACAAACGCTGGTCACCTGCGGCTTCACCTCGAGCGAAGAAAGATTGTGATAAGAAA
                      ____________________________________________________________
consensus             CAGAACAAACGCTGGTCACCTGCGGCTTCACCTCGAGCGAAGAAAGATTGTGATAAGAAA
 
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rJMSF036G04+          CAAAACAGTGCCAATGGATCTGAAAGAGATCGAACCTCAAGATTCAAATGAGATCTCACG
rJMSF029H14+          CAAAACAGTGCCAATGGATCTGAAAGAGATCGAACCTCAAGATTCAAATGAGATCTCACG
                      ____________________________________________________________
consensus             CAAAACAGTGCCAATGGATCTGAAAGAGATCGAACCTCAAGATTCAAATGAGATCTCACG
 
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rJMSF036G04+          TTCACTTTGAAATATTCTCTCCAAGCCTAAATCAGATGAACTATTATGGTCAACATATTT
rJMSF029H14+          TTCACTTTGAAATATTCTCTCCAAGCCTAAATCAGATGAACTATTATGGTCAACATATTT
                      ____________________________________________________________
consensus             TTCACTTTGAAATATTCTCTCCAAGCCTAAATCAGATGAACTATTATGGTCAACATATTT
 
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rJMSF036G04+          CGAAACGTAAAACAGGCTGGTTGGCAGTTTTGTAGCCTATATCCCTCTGTTTTCTTCTGC
rJMSF029H14+          CGAAACGTAAAACAGGCTGGTTGGCAGTTTTGTAGCCTATATCCCTCTGTTTTCTTCTGC
                      ____________________________________________________________
consensus             CGAAACGTAAAACAGGCTGGTTGGCAGTTTTGTAGCCTATATCCCTCTGTTTTCTTCTGC
 
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rJMSF036G04+          TGCTTAGGAGCTTGCTTTGTTTACATATGTATAGGCAAACTACATTATATATATTACATA
rJMSF029H14+          TGCTTAGGAGCTTGCTTTGTTTACATATGTATAGGCAAACTACATTATATATATTACATA
                      ____________________________________________________________
consensus             TGCTTAGGAGCTTGCTTTGTTTACATATGTATAGGCAAACTACATTATATATATTACATA
 
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rJMSF036G04+          TATTTGATTAATTTATATTTCTTGTTGTATCTACATACATTACCCTCGTGTAATTGAG  
rJMSF029H14+          TATTTGATTAATTTATATTTCTTGTTGTATCTACATACATTACCCTCGTGTAATTGAGTT
                      ____________________________________________________________
consensus             TATTTGATTAATTTATATTTCTTGTTGTATCTACATACATTACCCTCGTGTAATTGAGTT