clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF022P04 | Sequence | 676 | 000767 (5) | emb|CDP13254.1| | 2e-124 | unnamed protein product [Coffea canephora] | 758 | 012649 (6) | ref|XP_006367511.1| | 346 | PREDICTED: uncharacterized protein LOC102589547 [Solanum tuberosum] |
JMSF025A08 | Sequence | 695 | 000767 (5) | emb|CDP13254.1| | 1e-110 | unnamed protein product [Coffea canephora] | 758 | 012649 (6) | ref|XP_006367511.1| | 344 | PREDICTED: uncharacterized protein LOC102589547 [Solanum tuberosum] |
JMSF025M15 | Sequence | 626 | 000767 (5) | emb|CDP13254.1| | 4e-93 | unnamed protein product [Coffea canephora] | 755 | 012649 (6) | ref|XP_006367511.1| | 344 | PREDICTED: uncharacterized protein LOC102589547 [Solanum tuberosum] |
JMSF027M05 | Sequence | 636 | 000767 (5) | ref|XP_009765489.1| | 299 | PREDICTED: uncharacterized protein LOC104217035 [Nicotiana sylvestris] | 760 | 012649 (6) | ref|XP_006367511.1| | 346 | PREDICTED: uncharacterized protein LOC102589547 [Solanum tuberosum] |
JMSF037N08 | Sequence | 738 | 015813 | emb|CDP13254.1| | 7e-56 | unnamed protein product [Coffea canephora] | 734 | 012649 (6) | ref|XP_006367511.1| | 344 | PREDICTED: uncharacterized protein LOC102589547 [Solanum tuberosum] |
JMSF043K13 | Sequence | 761 | 000767 (5) | emb|CDP13254.1| | 5e-130 | unnamed protein product [Coffea canephora] | 835 | 012649 (6) | ref|XP_006341815.1| | 389 | PREDICTED: uncharacterized protein LOC102587665, partial [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF043K13+ GTTTGTCAGTGAGTTTGGTATTGATCTAAGGGGTACCAATGTGAACGACAATAG
____________________________________________________________
consensus GTTTGTCAGTGAGTTTGGTATTGATCTAAGGGGTACCAATGTGAACGACAATAG
. : . : . : . : . : . :
rJMSF043K13+ GTACTTCAACTGCTTCTTGGGTTTGGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
rJMSF025A08+ GGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
rJMSF025M15+ GGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
rJMSF022P04+ GGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
rJMSF037N08+ GGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
rJMSF027M05+ GGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
____________________________________________________________
consensus GTACTTCAACTGCTTCTTGGGTTTGGCAGCAGAGCTCGACTTTGACTGGGCACTGTGGAC
. : . : . : . : . : . :
rJMSF043K13+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
rJMSF025A08+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
rJMSF025M15+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
rJMSF022P04+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
rJMSF037N08+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
rJMSF027M05+ GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
____________________________________________________________
consensus GCTGGCTGGAAGTTACTATCTGAGAGAAGGTACAGTTGGACTAGAAGAGTTTTATGGGGT
. : . : . : . : . : . :
rJMSF043K13+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
rJMSF025A08+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
rJMSF025M15+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
rJMSF022P04+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
rJMSF037N08+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
rJMSF027M05+ TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
____________________________________________________________
consensus TCTGACCTGGAATTGGTGTGAACCGAGGAACTTGAGCTTCCTCCAAAGGATCTCTATCAT
. : . : . : . : . : . :
rJMSF043K13+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
rJMSF025A08+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
rJMSF025M15+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
rJMSF022P04+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
rJMSF037N08+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
rJMSF027M05+ GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
____________________________________________________________
consensus GCAGTCACCCTTTCGAGGACCAGGTTATACAGAGTCTCGACTACATAAACTAATTTTCCA
. : . : . : . : . : . :
rJMSF043K13+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
rJMSF025A08+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
rJMSF025M15+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
rJMSF022P04+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
rJMSF037N08+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
rJMSF027M05+ TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
____________________________________________________________
consensus TCCAATGACTGGGCTCTGTGTTCGAAGAGTTTCACTCTTCCAGCCATTGGAGTTAGGTCC
. : . : . : . : . : . :
rJMSF043K13+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
rJMSF025A08+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
rJMSF025M15+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
rJMSF022P04+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
rJMSF037N08+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
rJMSF027M05+ ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
____________________________________________________________
consensus ATGCTCAGAGTCAGATCCATGGGGCTACACTGCAGGTAAAGCATTAACAGTGGAAGGAAC
. : . : . : . : . : . :
rJMSF043K13+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
rJMSF025A08+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
rJMSF025M15+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
rJMSF022P04+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
rJMSF037N08+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
rJMSF027M05+ TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
____________________________________________________________
consensus TTACTTTTGCCTTCAGGCAGAAAAGCTCGGGAAGCCAGCAAAGCTTGGTCTGTTTTGCAC
. : . : . : . : . : . :
rJMSF043K13+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
rJMSF025A08+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
rJMSF025M15+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
rJMSF022P04+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
rJMSF037N08+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
rJMSF027M05+ AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
____________________________________________________________
consensus AGATGATAGCTCAAAATGGGAAATCATCTCAGATTCTAGGATGCATCTGTCATCGAAGCT
. : . : . : . : . : . :
rJMSF043K13+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
rJMSF025A08+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
rJMSF025M15+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
rJMSF022P04+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
rJMSF037N08+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
rJMSF027M05+ TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
____________________________________________________________
consensus TAAGGATGGCAGTAATGTCTGCCTGGATGTAGATTCCAACAATGTTATCATCACCAACAC
. : . : . : . : . : . :
rJMSF043K13+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
rJMSF025A08+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
rJMSF025M15+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
rJMSF022P04+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
rJMSF037N08+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
rJMSF027M05+ CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
____________________________________________________________
consensus CTGCAAATGTTTGAATAATGACAGTTCATGTGACCCTGCAAGCCAGTGGTTCAAAATTAT
. : . : . : . : . : . :
rJMSF043K13+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
rJMSF025A08+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
rJMSF025M15+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
rJMSF022P04+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
rJMSF037N08+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
rJMSF027M05+ CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
____________________________________________________________
consensus CGACAGCACGAGAGGAACAACTACCAAAAGTGACTTTCAGAGCACCTCATTCTTGTATTT
. : . : . : . : . : . :
rJMSF043K13+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
rJMSF025A08+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
rJMSF025M15+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
rJMSF022P04+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
rJMSF037N08+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
rJMSF027M05+ TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
____________________________________________________________
consensus TCTGGCAAAAAAATTGTTTGCAAGCTACATATGATAATTCTGATGAAAAGTTCATATAGA
. : . : . : . : . : . :
rJMSF043K13+ GTTTAGCCATACAAGTTCAAAACATGACATGTTCTTTT
rJMSF025A08+ GTTTAGCCATACAAGTTCAAAACATGACATGTTCTTTTGAAAATAGTCTATGAAAAGTT
rJMSF025M15+ GTTTAGCCATACAAGTTCAAAACATGACATGTTCTTTTGAAAATAGTCTATGAAAAGTT
rJMSF022P04+ GTTTAGCCATACAAGTTCAAAACATGACATGTTCTCTTGAAAATAGTCTATGAAAAGTT
rJMSF037N08+ GTTTAGCCATAC
rJMSF027M05+ GTTTAGCCATACAAGTTCAAAACATGACATGTTCTTTTGAAAATAGTCTATGAAAAGTTA
____________________________________________________________
consensus GTTTAGCCATACAAGTTCAAAACATGACATGTTCTTTTGAAAATAGTCTATGAAAAGTTA