Contig 012647:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN017G20-                        CTCCGGTTCCCCATCCTCAACCTAAGCCAGCTCCAAAAGCGAAACCA
                      ____________________________________________________________
consensus                          CTCCGGTTCCCCATCCTCAACCTAAGCCAGCTCCAAAAGCGAAACCA
 
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JMFN017G20-           AGTCCAATTTCACCACCAGTAGTAACTCCTGCACCAGTTTCCTCGTCGGCCGACATTGGG
rJMSF027J19+                          CAGTAGTAACTCCTGCACCAGTTTCCTCGTCGGCCGACATTGGG
                      ____________________________________________________________
consensus             AGTCCAATTTCACCACCAGTAGTAACTCCTGCACCAGTTTCCTCGTCGGCCGACATTGGG
 
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JMFN017G20-           GTTGCACAGAGGGTAACAAAGTCATGGGTTTCTAAAGGCAAAACATACCACAGATACTCA
rJMSF027J19+          GTTGCACAGAGGGTAACAAAGTCATGGGTTTCTAAAGGCAAAACATACCACAGATACTCA
                      ____________________________________________________________
consensus             GTTGCACAGAGGGTAACAAAGTCATGGGTTTCTAAAGGCAAAACATACCACAGATACTCA
 
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JMFN017G20-           GCAATAGTGACCAACAAGTCTGCCAAGAGCCTCAAGGATTTGAAGCTCTCAATATCCAAA
rJMSF027J19+          GCAATAGTGACCAACAAGTCTGCCAAGAGCCTCAAGGATTTGAAGCTCTCAATATCCAAA
                      ____________________________________________________________
consensus             GCAATAGTGACCAACAAGTCTGCCAAGAGCCTCAAGGATTTGAAGCTCTCAATATCCAAA
 
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JMFN017G20-           CTCTATGGTCCTCTCTGGGGTCTTTCCAAGTATGGCAACTCCTATGCCTTCCCAAAATGG
rJMSF027J19+          CTCTATGGTCCTCTCTGGGGTCTTTCCAAGTATGGCAACTCCTATGCCTTCCCAAAATGG
                      ____________________________________________________________
consensus             CTCTATGGTCCTCTCTGGGGTCTTTCCAAGTATGGCAACTCCTATGCCTTCCCAAAATGG
 
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JMFN017G20-           CAGAAATCTCTGGGTGCTGGGAAGAGCCTCGAATTCGTGTACATCCATGCTGCTTCTCCT
rJMSF027J19+          CAGAAATCTCTGGGTGCTGGGAAGAGCCTCGAATTCGTGTACATCCATGCTGCTTCTCCT
                      ____________________________________________________________
consensus             CAGAAATCTCTGGGTGCTGGGAAGAGCCTCGAATTCGTGTACATCCATGCTGCTTCTCCT
 
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JMFN017G20-           GCTCAAGTCTCGGTATCAGCCTACAATCTGGTCTAAAAGGCAACGAAGGAAAAGAAACAA
rJMSF027J19+          GCTCAAGTCTCGGTATCAGCCTACAATCTGGTCTAAAAGGCAACGAAGGAAAAGAAACAA
                      ____________________________________________________________
consensus             GCTCAAGTCTCGGTATCAGCCTACAATCTGGTCTAAAAGGCAACGAAGGAAAAGAAACAA
 
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JMFN017G20-           AACGCTCAGCACACTTCAATCTCTGATTTTAGTGTAAGAAATTGTGCAGGTGTACATTGG
rJMSF027J19+          AACGCTCAGCACACTTCAATCTCTGATTTTAGTGTAAGAAATTGTGCAGGTGTACATTGG
                      ____________________________________________________________
consensus             AACGCTCAGCACACTTCAATCTCTGATTTTAGTGTAAGAAATTGTGCAGGTGTACATTGG
 
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JMFN017G20-           TGCAAGTCCAGGTTGTGTGTTTTTTTTATTTTTACATGCTGTAATTCTCTGGTTTTTTCT
rJMSF027J19+          TGCAAGTCCAGGTTGTGTGTTTTTTTTATTTTTACATGCTGTAATTCTCTGGTTTTTTCT
                      ____________________________________________________________
consensus             TGCAAGTCCAGGTTGTGTGTTTTTTTTATTTTTACATGCTGTAATTCTCTGGTTTTTTCT
 
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JMFN017G20-           GGGTGGTTCGCGATCTTAGCGAGGGTTTAGGTGAAGCTAGTGTTAATAAAGAATGAAGCT
rJMSF027J19+          GGGTGGTTCGCGATCTTAGCGAGGGTTTAGGTGAAGCTAGTGTTAATAAAGAATGGAGCT
                      ____________________________________________________________
consensus             GGGTGGTTCGCGATCTTAGCGAGGGTTTAGGTGAAGCTAGTGTTAATAAAGAATGGAGCT
 
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JMFN017G20-           TTGAGAAGAAAGGAGTGAAGGGACAGAGTTAAAATGAGGGCTCATCCT            
rJMSF027J19+          TTGAGAAGAAAGGAGTGAAGGGACAGAGTTAAAATGAGGGCTCATCCTCTTTCTTCTCCA
                      ____________________________________________________________
consensus             TTGAGAAGAAAGGAGTGAAGGGACAGAGTTAAAATGAGGGCTCATCCTCTTTCTTCTCCA
 
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rJMSF027J19+          CTTCATCAGTGATGACAGTATAGAACTGAGAGAGAGACAGAAAAGAGTGCTGAGAAGCGG
                      ____________________________________________________________
consensus             CTTCATCAGTGATGACAGTATAGAACTGAGAGAGAGACAGAAAAGAGTGCTGAGAAGCGG
 
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rJMSF027J19+          AAATAATTTGACTTCATTCCCAACAGCACCCAAGTGTTTGGTTTCCTTGTACCTGAGAGA
                      ____________________________________________________________
consensus             AAATAATTTGACTTCATTCCCAACAGCACCCAAGTGTTTGGTTTCCTTGTACCTGAGAGA
 
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rJMSF027J19+          ATACTTCTACCTTTGCTTCATGTTTTATATATGTACTTGTCATGTTGTAAACTTACAACA
                      ____________________________________________________________
consensus             ATACTTCTACCTTTGCTTCATGTTTTATATATGTACTTGTCATGTTGTAAACTTACAACA