Contig 012644:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF013I18+                                                       CAGGCTTGGACAAGA
                      ____________________________________________________________
consensus                                                          CAGGCTTGGACAAGA
 
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rJMSF013I18+          TTGTTGACCCACTGCAGCAGTTGCGATCTGCAAATGGAGTTGGGCCAATAGTTGATGTCT
                      ____________________________________________________________
consensus             TTGTTGACCCACTGCAGCAGTTGCGATCTGCAAATGGAGTTGGGCCAATAGTTGATGTCT
 
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rJMSF013I18+          TCTCACTTTTTGCAATCGCTACTTCTTACATTGGATTTATCTTGGGCCTCTCGGACTTCC
rJMSF027A20+                                             TTTATCTTGGGCCTCTCGGACTTCC
                      ____________________________________________________________
consensus             TCTCACTTTTTGCAATCGCTACTTCTTACATTGGATTTATCTTGGGCCTCTCGGACTTCC
 
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rJMSF013I18+          TTGCGGACTTGCTGAAACTCCCCTCGGGCCAAAACACACTGCCGTACCTGCTTACTGTGG
rJMSF027A20+          NTGCGGACTTGCTGAAACTCCCCTCGGGCCAAAACACACTGCCGTACCTGCTTACTGTGG
                      ____________________________________________________________
consensus             TTGCGGACTTGCTGAAACTCCCCTCGGGCCAAAACACACTGCCGTACCTGCTTACTGTGG
 
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rJMSF013I18+          TTCCTCCATTGATACTATCGTTGTTGGATCCAGAGATCTTCTTCAAGGCATTGGATTTTG
rJMSF027A20+          TTCCTCCATTGATACTATCGTTGTTGGATCCAGAGATCTTCTTCAAGGCATTGGATTTTG
                      ____________________________________________________________
consensus             TTCCTCCATTGATACTATCGTTGTTGGATCCAGAGATCTTCTTCAAGGCATTGGATTTTG
 
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rJMSF013I18+          CCGGGACATATGGAGTTTTGGTACTGTTTGGACTCTTGCCTGCTGCAATGTCCTGGTCTG
rJMSF027A20+          CCGGGACATATGGAGTTTTGGTACTGTTTGGACTCTTGCCTGCTGCAATGTCCTGGTCTG
                      ____________________________________________________________
consensus             CCGGGACATATGGAGTTTTGGTACTGTTTGGACTCTTGCCTGCTGCAATGTCCTGGTCTG
 
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rJMSF013I18+          ATAGATATGCAGAATCGTCGAAATCTCCGAGATTACCGTCTTTAGTTCCCTGGGGAAGGC
rJMSF027A20+          ATAGATATGCAGAATCGTCGAAATCTCCGAGATTACCGTCTTTAGTTCCCTGGGGAAGGC
                      ____________________________________________________________
consensus             ATAGATATGCAGAATCGTCGAAATCTCCGAGATTACCGTCTTTAGTTCCCTGGGGAAGGC
 
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rJMSF013I18+          TGACACTATCGCTCGTGCTTGGAGGTTCAGCGTTCGTCATCCTTTCCGAAATACTCGAGA
rJMSF027A20+          TGACACTATCGCTCGTGCTTGGAGGTTCAGCGTTCGTCATCCTTTCCGAAATACTCGAGA
                      ____________________________________________________________
consensus             TGACACTATCGCTCGTGCTTGGAGGTTCAGCGTTCGTCATCCTTTCCGAAATACTCGAGA
 
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rJMSF013I18+          ACTTTGCTCATGCATGAATGGATGTGTGACCATCCATCTGCAACCCTCATTTCTTCACTT
rJMSF027A20+          ACTTTGCTCATGCATGAATGGATGTGTGACCATCCATCTGCAACCCTCATTTCTTCACTT
                      ____________________________________________________________
consensus             ACTTTGCTCATGCATGAATGGATGTGTGACCATCCATCTGCAACCCTCATTTCTTCACTT
 
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rJMSF013I18+          CTCAGTTCCCTACTGCACTGTTACAAAGTGAATTGGCAAATTGAAGAGTTGAAGAGATTG
rJMSF027A20+          CTCAGTTCCCTACTGCACTGTTACAAAGTGAATTGGCAAATTGAAGAGTTGAAGAGATTG
                      ____________________________________________________________
consensus             CTCAGTTCCCTACTGCACTGTTACAAAGTGAATTGGCAAATTGAAGAGTTGAAGAGATTG
 
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rJMSF013I18+          TTTAGGCTATATTTCATCAGATGCATATTTGAACTTGTTGCTGTAACAGAAAGGAGATTC
rJMSF027A20+          TTTAGGCTATATTTCATCAGATGCATATTTGAACTTGTTGCTGTAACAGAAAGGAGATTC
                      ____________________________________________________________
consensus             TTTAGGCTATATTTCATCAGATGCATATTTGAACTTGTTGCTGTAACAGAAAGGAGATTC
 
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rJMSF013I18+          AGATGTTATATTTGAAAACTGAATATCATCTTCTGAACAACAGAAATTCACCGATATCTG
rJMSF027A20+          AGATGTTATATTTGAAAACTGAATATCATCTTCTGAACAACAGAAATTCACCGATATCTG
                      ____________________________________________________________
consensus             AGATGTTATATTTGAAAACTGAATATCATCTTCTGAACAACAGAAATTCACCGATATCTG
 
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rJMSF013I18+          AAAGTGCGTTGTAGGTGAAATCTGTGTCTTGCGATCCTAGTCGGCAAAGGACAGCTCT  
rJMSF027A20+          AAAGTGCGTTGTAGGTGAAATCTGTGTCTTGCGATCCTAGTCGGCAAAGGACAGCTCTTA
                      ____________________________________________________________
consensus             AAAGTGCGTTGTAGGTGAAATCTGTGTCTTGCGATCCTAGTCGGCAAAGGACAGCTCTTA
 
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rJMSF027A20+          CCAAAAGTCAAACTTAGCCAATGGTTTGTTGGTCTATTATGAATCCTTGCATAGTTAGCA
                      ____________________________________________________________
consensus             CCAAAAGTCAAACTTAGCCAATGGTTTGTTGGTCTATTATGAATCCTTGCATAGTTAGCA