| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF026L19 | Sequence | 650 | 013389 (4) | emb|CBI23671.3| | 3e-52 | unnamed protein product [Vitis vinifera] | 786 | 012641 (3) | ref|XP_011091286.1| | 8e-16 | PREDICTED: kinesin-like protein KIF22 [Sesamum indicum] |
| JMSF029K06 | Sequence | 665 | 013389 (4) | emb|CBI23671.3| | 3e-58 | unnamed protein product [Vitis vinifera] | 763 | 012641 (3) | ref|XP_011091286.1| | 6e-16 | PREDICTED: kinesin-like protein KIF22 [Sesamum indicum] |
| JMSF033M04 | Sequence | 656 | 013389 (4) | emb|CBI23671.3| | 4e-59 | unnamed protein product [Vitis vinifera] | 740 | 012641 (3) | ref|XP_011091286.1| | 5e-16 | PREDICTED: kinesin-like protein KIF22 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF029K06+ GAAGAAGAAGACGGGGAGAT
____________________________________________________________
consensus GAAGAAGAAGACGGGGAGAT
. : . : . : . : . : . :
rJMSF029K06+ CATATAACAAATGCTCCACCGACGAGGAGGTGCAGAAAGAGGTAGTCGAGGAGAAGACAA
rJMSF033M04+ ACCGACGAGGAGGTGCAGAAAGAGGTAGTCGAGGAGAAGACAA
rJMSF026L19+ ATAACAAATGCTCCACCGACGAGGAGGTGCAGAAAGAGGTAGTCGAGGAGAAGACAA
____________________________________________________________
consensus CATATAACAAATGCTCCACCGACGAGGAGGTGCAGAAAGAGGTAGTCGAGGAGAAGACAA
. : . : . : . : . : . :
rJMSF029K06+ TATGTTCAAGTGCAGTTGTGGGTATGCCAGCAGATATGTTGAGCCAAATAGGCAACCTTT
rJMSF033M04+ TATGTTCAAGTGCAGTTGTGGGTATGCCAGCAGATATGTTGAGCCAAATAGGCAACCTTT
rJMSF026L19+ TATGTTCAAGTGCAGTTGTGGGTATGCCAGCAGATATGTTGAGCCAAATAGGCAACCTTT
____________________________________________________________
consensus TATGTTCAAGTGCAGTTGTGGGTATGCCAGCAGATATGTTGAGCCAAATAGGCAACCTTT
. : . : . : . : . : . :
rJMSF029K06+ TAGTGGAAAAATCTTCTGCAAATGAAGAGGATGCAGAAGGGGCCTCATATAGGGAAAGAA
rJMSF033M04+ TAGTGGAAAAATCTTCTGCAAATGAAGAGGATGCAGAAGGGGCCTCATATAGGGAAAGAA
rJMSF026L19+ TAGTGGAAAAATCTTCTGCAAATGAAGAGGATGCAGAAGGGGCCTCATATAGGGAAAGAA
____________________________________________________________
consensus TAGTGGAAAAATCTTCTGCAAATGAAGAGGATGCAGAAGGGGCCTCATATAGGGAAAGAA
. : . : . : . : . : . :
rJMSF029K06+ GAATACAGAACATATTCACTCTCTGTGGAAACTATAGAGAAATGTCTCAAAACATGAGAG
rJMSF033M04+ GAATACAGAACATATTCACTCTCTGTGGAAACTATAGAGAAATGTCTCAAAACATGAGAG
rJMSF026L19+ GAATACAGAACATATTCACTCTCTGTGGAAACTATAGAGAAATGTCTCAAAACATGAGAG
____________________________________________________________
consensus GAATACAGAACATATTCACTCTCTGTGGAAACTATAGAGAAATGTCTCAAAACATGAGAG
. : . : . : . : . : . :
rJMSF029K06+ AAACTCCTATGCTTGACAGTGGCTATTTGTCATCATCCCCTCCTCCAGCCAAGACAATTC
rJMSF033M04+ AAACTCCTATGCTTGACAGTGGCTATTTGTCATCATCCCCTCCTCCAGCCAAGACAATTC
rJMSF026L19+ AAACTCCTATGCTTGACAGTGGCTATTTGTCATCATCCCCTCCTCCAGCCAAGACAATTC
____________________________________________________________
consensus AAACTCCTATGCTTGACAGTGGCTATTTGTCATCATCCCCTCCTCCAGCCAAGACAATTC
. : . : . : . : . : . :
rJMSF029K06+ AAGAGCATTCTGCGACAAAGAGTGTCTCAAATGAACATAAATCAGCTGAAAAGAACACGA
rJMSF033M04+ AAGAGCATTCTGCGACAAAGAGTGTCTCAAATGAACATAAATCAGCTGAAAAGAACACGA
rJMSF026L19+ AAGAGCATTCTGCGACAAAGAGTGTCTCAAATGAACATAAATCAGCTGAAAAGAACACGA
____________________________________________________________
consensus AAGAGCATTCTGCGACAAAGAGTGTCTCAAATGAACATAAATCAGCTGAAAAGAACACGA
. : . : . : . : . : . :
rJMSF029K06+ ATCTCTTTGAAGCAAAGGATTTGAAAGAGAACTTCAACCCATCAGATGAAAACAGCCGCG
rJMSF033M04+ ATCTCTTTGAAGCAAAGGATTTGAAAGAGAACTTCAACCCATCAGATGAAAACAGCCGCG
rJMSF026L19+ ATCTCTTTGAAGCAAAGGATTTGAAAGAGAACTTCAACCCATCAGATGAAAACAGCCGCG
____________________________________________________________
consensus ATCTCTTTGAAGCAAAGGATTTGAAAGAGAACTTCAACCCATCAGATGAAAACAGCCGCG
. : . : . : . : . : . :
rJMSF029K06+ ATTTGGAAGTGTATGTTAAATGGACCCCTTCAAAGGATTCATCAGGCGCACCGGGGCCTA
rJMSF033M04+ ATTTGGAAGTGTATGTTAAATGGACCCCTTCAAAGGATTCATCAGGCGCACCGGGGCCTA
rJMSF026L19+ ATTTGGAAGTGTATGTTAAATGGACCCCTTCAAAGGATTCATCAGGCGCACCGGGGCCTA
____________________________________________________________
consensus ATTTGGAAGTGTATGTTAAATGGACCCCTTCAAAGGATTCATCAGGCGCACCGGGGCCTA
. : . : . : . : . : . :
rJMSF029K06+ AAGAACAGCAGGAAGCCAGAACATCGGCAAGCAAGCTTCCCACTTGCAACAACAATCAAT
rJMSF033M04+ AAGAACAGCAGGAAGCCAGAACATCGGCAAGCAAGCTTCCCACTTGCAACAACAATCAAT
rJMSF026L19+ AAGAACAGCAGGAAGCCAGAACATCGGCAAGCAAGCTTCCCACTTGCAACAACAATCAAT
____________________________________________________________
consensus AAGAACAGCAGGAAGCCAGAACATCGGCAAGCAAGCTTCCCACTTGCAACAACAATCAAT
. : . : . : . : . : . :
rJMSF029K06+ TACACGGCGGCCACCTCAATCAGCTCCCTCTCGGCCAAGTACAGAATTTACTTCCTGTTG
rJMSF033M04+ TGCACGGCGGCCACCTCAATCAGCTCCCTCTCGGCCAAGTACAGAATTTACTTCCTGTTG
rJMSF026L19+ TACACGGCGGCCACCTCAATCAGCTCCCTCTCGGCCAAGTACAGAATTTACTTCCTGTTG
____________________________________________________________
consensus TACACGGCGGCCACCTCAATCAGCTCCCTCTCGGCCAAGTACAGAATTTACTTCCTGTTG
. : . : . : . : . : . :
rJMSF029K06+ ATGGCTTTTGAGCCAAAATGGCAGATGATGATGCGCTGTTGGTGCATTTTGGGTTCATTT
rJMSF033M04+ ATGGCTTTTGAGCCAAAATGGCAGATGATGATGCGCTGTTGGTGCATTTTGGGTTCATTT
rJMSF026L19+ ATGGCTTTTGAGCCAAAATGGCAGATGATGATGCGCTGTTGGTGCATTTTGGGTTCATTT
____________________________________________________________
consensus ATGGCTTTTGAGCCAAAATGGCAGATGATGATGCGCTGTTGGTGCATTTTGGGTTCATTT
. : . : . : . : . : . :
rJMSF029K06+ TCTTGTGTATCTTGTACTAGTTATCAGTCAGTTGATGTGTATTTTTTGGGGTTTTTGTTT
rJMSF033M04+ TCTTGTGTATCTTGTACTAGTTATCAGTCAGTTGATGTGTATTTTTTGGGGTTTTTGTTT
rJMSF026L19+ TCTTGTGTATCTTGTACTAGTTATCAGTCAGTTGATGTGTATTTTTTGGGGTTTTTGTTT
____________________________________________________________
consensus TCTTGTGTATCTTGTACTAGTTATCAGTCAGTTGATGTGTATTTTTTGGGGTTTTTGTTT
. : . : . : . : . : . :
rJMSF029K06+ TCACTGTTCATATGGGAATTCAG
rJMSF033M04+ TCACTGTTCATATGGGAATTCAGTATCAGTCTGACCA
rJMSF026L19+ TCACTGTTCATATGGGAATTCAGTATCAGTCTGACCATGTTCTAATGAAGTAAAAACTTC
____________________________________________________________
consensus TCACTGTTCATATGGGAATTCAGTATCAGTCTGACCATGTTCTAATGAAGTAAAAACTTC