Contig 012640:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026K24Sequence385007725 (6)ref|XP_009773895.1|7e-26PREDICTED: exportin-1-like isoform X3 [Nicotiana sylvestris]731012640 (2)gb|KDO50607.1|1e-47hypothetical protein CISIN_1g0367702mg, partial [Citrus sinensis]
JMSF037N12Sequence637007725 (6)ref|XP_009773895.1|2e-115PREDICTED: exportin-1-like isoform X3 [Nicotiana sylvestris]744012640 (2)gb|KDO50607.1|4e-54hypothetical protein CISIN_1g0367702mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF037N12+                         TGAGTCAGGTTCATTGACTGAGCCACTATGGGATGCAACTGTTCC
rJMSF026K24+                                                           GCAACTGTTCC
                      ____________________________________________________________
consensus                            TGAGTCAGGTTCATTGACTGAGCCACTATGGGATGCAACTGTTCC
 
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rJMSF037N12+          TTATGCTTATCCCAATAATGCGATGTTTGTACGTGAGTACACCATTAAACTTCTGAGTTC
rJMSF026K24+          TTATGCTTATCCCAATAATGCGATGTTTGTACGNGAGTACACCATTAAACTTCTGAGTTC
                      ____________________________________________________________
consensus             TTATGCTTATCCCAATAATGCGATGTTTGTACGTGAGTACACCATTAAACTTCTGAGTTC
 
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rJMSF037N12+          ATCTTTCCCCAACATGACTGCATCAGAGGTGACCCAATTTGTTAGTGGACTCTTTGAATC
rJMSF026K24+          ATCTTTCCCCAACATGACTGCATCAGAGGTGACCCAATTTGTTAGTGGACTCTTTGAATC
                      ____________________________________________________________
consensus             ATCTTTCCCCAACATGACTGCATCAGAGGTGACCCAATTTGTTAGTGGACTCTTTGAATC
 
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rJMSF037N12+          AACAAATGACCCTTCAGTATTCAAGAATCACATTCGTGACTTTCTTGCTCAATCAAAGGA
rJMSF026K24+          AACAAATGACCCTTCAGTATTCAAGAATCACATTCGTGACTTTCTTGCTCAATCAAAGGA
                      ____________________________________________________________
consensus             AACAAATGACCCTTCAGTATTCAAGAATCACATTCGTGACTTTCTTGCTCAATCAAAGGA
 
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rJMSF037N12+          ATTCTCAGCCCAGGACAACAAGGACCTTTATGCCGAAGAAGCTGCTGCTCAGAGAGAAAG
rJMSF026K24+          ATTCTCAGCCCAGGACAACAAGGACCTTTATGCCGAAGAAGCTGCTGCTCAGAGAGAAAG
                      ____________________________________________________________
consensus             ATTCTCAGCCCAGGACAACAAGGACCTTTATGCCGAAGAAGCTGCTGCTCAGAGAGAAAG
 
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rJMSF037N12+          GGAGCGACAACGGATGCTTTCAATTCCAGGGCTAATTGCACCCAACGAGATACAAGATGA
rJMSF026K24+          GGAGCGACAACGGATGCTTTCAATTCCAGGGCTAATTGCACCCAACGAGATACAAGATGA
                      ____________________________________________________________
consensus             GGAGCGACAACGGATGCTTTCAATTCCAGGGCTAATTGCACCCAACGAGATACAAGATGA
 
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rJMSF037N12+          GATGGTGGATTCATAAAACAGGAAGTCTTTGCTCCGTAGACTAATTTCATTTGGCTTGTA
rJMSF026K24+          GATGGTGGATTCATAAAACAGGAAGTCTTTGCTCCGTAGACTAATTTCATTTGGCTTGTA
                      ____________________________________________________________
consensus             GATGGTGGATTCATAAAACAGGAAGTCTTTGCTCCGTAGACTAATTTCATTTGGCTTGTA
 
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rJMSF037N12+          GTCCTCAAGTGTTCTGGTTGCCTCGAGATGATTATTGTGTCACAACCGGAGGATCGTGTA
rJMSF026K24+          GTCCTCAAGTGTTCTGGTTGCCTCGAGATGATTATTGTGTCACAACCGGAGGATCGTGTA
                      ____________________________________________________________
consensus             GTCCTCAAGTGTTCTGGTTGCCTCGAGATGATTATTGTGTCACAACCGGAGGATCGTGTA
 
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rJMSF037N12+          TTTTTTGGTCAGTTTTTCACGTTCTTGCTTTGTTGCTGTGATTCACGGATATCCAATCTC
rJMSF026K24+          TTTTTTGGTCAGTTTTTCACGTTCTTGCTTTGTTGCTGTGATTCACGGATATCCAATCTC
                      ____________________________________________________________
consensus             TTTTTTGGTCAGTTTTTCACGTTCTTGCTTTGTTGCTGTGATTCACGGATATCCAATCTC
 
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rJMSF037N12+          CCGGCTCAACTTGGCCACCGAAGGAAGAGATGATTAGCTGGCTAATGTAGATTACTTAGA
rJMSF026K24+          CCGGCTCAACTTGGCCACCGAAGGAAGAGATGATTAGCTGGCTAATGTAGATTACTTAGA
                      ____________________________________________________________
consensus             CCGGCTCAACTTGGCCACCGAAGGAAGAGATGATTAGCTGGCTAATGTAGATTACTTAGA
 
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rJMSF037N12+          TTCTAATCTAGTGAATACAACATGCTATTGTATCCGGCTCCTGGTTTTAGCGGTATTGTA
rJMSF026K24+          TTCTAATCTAGTGAATACAACATGCTATTGTATCCGGCTCCNGGTTTTAGCGGTATTGTA
                      ____________________________________________________________
consensus             TTCTAATCTAGTGAATACAACATGCTATTGTATCCGGCTCCTGGTTTTAGCGGTATTGTA
 
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rJMSF037N12+          GTTCTGAGGTTTGGGACGGATGGTTGAAATGACCTTTTCAGTGGTTGAGACAGGAGAGTA
rJMSF026K24+          GTTCTGAGGTTTGGGACGGATGGTTGAAATGACCTTTTCAGTGGTTGAGACAGGAGAGTA
                      ____________________________________________________________
consensus             GTTCTGAGGTTTGGGACGGATGGTTGAAATGACCTTTTCAGTGGTTGAGACAGGAGAGTA
 
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rJMSF037N12+          TTGTATACAAAAATTGTGGGGTTGTGCAGCCATCATTTT                     
rJMSF026K24+          TTGTATACAAAAATTGTGGGGTNGTGCAGCCATCATTTTTGTTTATTTGTAGAACCAGCT
                      ____________________________________________________________
consensus             TTGTATACAAAAATTGTGGGGTTGTGCAGCCATCATTTTTGTTTATTTGTAGAACCAGCT