Contig 012637:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026D24Sequence656012637 (2)ref|XP_009597442.1|1e-52PREDICTED: uncharacterized protein LOC104093408 isoform X2 [Nicotiana tomentosi660012637 (2)ref|XP_009597436.1|3e-86PREDICTED: uncharacterized protein LOC104093408 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF026D24-                                                    GCGAACCATTTATTATACA
                      ____________________________________________________________
consensus                                                      GCGAACCATTTATTATACA
 
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JMSF026D24-           GCTCACTCAGCTCACCGTGGTCCATTTCTCTTCTCAGGAAAAATGGGCGGCTGTGTTTCA
                      ____________________________________________________________
consensus             GCTCACTCAGCTCACCGTGGTCCATTTCTCTTCTCAGGAAAAATGGGCGGCTGTGTTTCA
 
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JMSF026D24-           AACCCAACCAGAAGATCAAATCACACAGAGTGCCCTTCCCAAAGTGTCGAAGGTTTCGTA
                      ____________________________________________________________
consensus             AACCCAACCAGAAGATCAAATCACACAGAGTGCCCTTCCCAAAGTGTCGAAGGTTTCGTA
 
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JMSF026D24-           GGAAGAGGCCTTGCAGTGTGTCTGTTGCACCAATGGAACAGTTTTCTGGTGTGGGGAATT
                      ____________________________________________________________
consensus             GGAAGAGGCCTTGCAGTGTGTCTGTTGCACCAATGGAACAGTTTTCTGGTGTGGGGAATT
 
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JMSF026D24-           ACGGGAGAGATTTCGATGCAGATGAGTTTATACTGGGTTTGCTTGAGACCCAAAATTCCC
                      ____________________________________________________________
consensus             ACGGGAGAGATTTCGATGCAGATGAGTTTATACTGGGTTTGCTTGAGACCCAAAATTCCC
 
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JMSF026D24-           TAGACTCCTTTTGAGATTGAATTTTGCTTGTTCTATTATTCCAAATAACACTCCCTTTTA
                      ____________________________________________________________
consensus             TAGACTCCTTTTGAGATTGAATTTTGCTTGTTCTATTATTCCAAATAACACTCCCTTTTA
 
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JMSF026D24-           TAGGGTTGATTACAAAGAAGATATCTCACATTGCTCAGCATCTTCAATTGCCTACTGTAG
rJMSF026D24+          TAGGGTTGATTACAAAGAAGATATCTCACATTGCTCAGCATCTTCAATTGCCTACTGTAG
                      ____________________________________________________________
consensus             TAGGGTTGATTACAAAGAAGATATCTCACATTGCTCAGCATCTTCAATTGCCTACTGTAG
 
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JMSF026D24-           AGCCACACGATAAAGTTCCACCGCTTCTGATCATTAATATACAGCTACCAACATATCCCG
rJMSF026D24+          AGCCACACGATAAAGTTCCACCGCTTCTGATCATTAATATACAGCTACCAACATATCCCG
                      ____________________________________________________________
consensus             AGCCACACGATAAAGTTCCACCGCTTCTGATCATTAATATACAGCTACCAACATATCCCG
 
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JMSF026D24-           CTTCCCTGTTCCTTGGAGACGGGGATGGGGAAGGAATGAGCCTCGTCTTGTATTTCCAAT
rJMSF026D24+          CTTCCCTGTTCCTTGGAGACGGGGATGGGGAAGGAATGAGCCTCGTCTTGTATTTCCAAT
                      ____________________________________________________________
consensus             CTTCCCTGTTCCTTGGAGACGGGGATGGGGAAGGAATGAGCCTCGTCTTGTATTTCCAAT
 
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JMSF026D24-           TATCAGAGAACTTCGAGAAAGAGACTTCGCCACAATTTCAAGACAGCATAAAGAGACTTG
rJMSF026D24+          TATCAGAGAACTTCGAGAAAGAGACTTCGCCACAATTTCAAGACAGCATAAAGAGACTTG
                      ____________________________________________________________
consensus             TATCAGAGAACTTCGAGAAAGAGACTTCGCCACAATTTCAAGACAGCATAAAGAGACTTG
 
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JMSF026D24-           TGATGGATGAGGTAGAAACCGTCAAGGGTTTTGCAAAAGAATCAGCGGTGCCATACCGGG
rJMSF026D24+          TGATGGATGAGGTAGAAACCGTCAAGGGTTTTGCAAAAGAATCAGCGGTGCCATACCGGG
                      ____________________________________________________________
consensus             TGATGGATGAGGTAGAAACCGTCAAGGGTTTTGCAAAAGAATCAGCGGTGCCATACCGGG
 
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JMSF026D24-           AGAGACTAAAAATTTTGGTTGGCGTCGTGAATCA                          
rJMSF026D24+          AGAGACTAAAAATTTTGGTTGGCGTCGTGAATCATGCAGAGAAGAAGCTTTTGCGTGCCT
                      ____________________________________________________________
consensus             AGAGACTAAAAATTTTGGTTGGCGTCGTGAATCATGCAGAGAAGAAGCTTTTGCGTGCCT
 
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rJMSF026D24+          ACAGGCTACAACAATAAGCCAGTACTTTCACGTCCCCAGCACGCTTTCTATAAGGGTCCA
                      ____________________________________________________________
consensus             ACAGGCTACAACAATAAGCCAGTACTTTCACGTCCCCAGCACGCTTTCTATAAGGGTCCA
 
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rJMSF026D24+          AAACTATTTTGAAATCGACCTGGATGTTCATCATTTCAGCTACATTTCTAGGAAAGGGCT
                      ____________________________________________________________
consensus             AAACTATTTTGAAATCGACCTGGATGTTCATCATTTCAGCTACATTTCTAGGAAAGGGCT
 
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rJMSF026D24+          TGATGCATTCCGGGAGAGGTTGAAACATGGGATACTTGACTTAGGATTAACGATCCAGGC
                      ____________________________________________________________
consensus             TGATGCATTCCGGGAGAGGTTGAAACATGGGATACTTGACTTAGGATTAACGATCCAGGC
 
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rJMSF026D24+          TCAGAAGGCGGAGGAACTGCCAGAGAAAGTTGTGTGCAACATTCGACTGAACAAGATTGA
                      ____________________________________________________________
consensus             TCAGAAGGCGGAGGAACTGCCAGAGAAAGTTGTGTGCAACATTCGACTGAACAAGATTGA
 
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rJMSF026D24+          TTTTGTAAATCATGGGCAGATACCTCAATTTGTAATACCTGTATAACTTCAACTCAGATC
                      ____________________________________________________________
consensus             TTTTGTAAATCATGGGCAGATACCTCAATTTGTAATACCTGTATAACTTCAACTCAGATC