Contig 012635:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN041B05+                                 TAATTGCAGACCAATCGATTTCTGCCCTTTCGTTAACT
JMFS049H12+                   CTTTCCAAAGTAATTAATTGCAGACCAATCGATTTCTGCCCTTTCGTTAACT
rJMSF025M17-                                                                   ACT
                      ____________________________________________________________
consensus                     CTTTCCAAAGTAATTAATTGCAGACCAATCGATTTCTGCCCTTTCGTTAACT
 
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JMFN041B05+           AACGATAGGGAAGCAATTCTATCTAAATCTCTATATATACATCACTTTCTCTTCAATGCA
JMFS049H12+           AACGATAGGGAAGCAATTCTATCTAAATCTCTATATATACATCACTTTCTCTTCAATGCA
rJMSF025M17-          AACGATAGGGAAGCAATTCTATCTAAATCTCTATATATACATCACTTTCTCTTCAATGCA
                      ____________________________________________________________
consensus             AACGATAGGGAAGCAATTCTATCTAAATCTCTATATATACATCACTTTCTCTTCAATGCA
 
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JMFN041B05+           AAGACTATCAAGTTTCAGTCTTCAATACAAATACTAGGTCATGCAGGCCAGCAGTTATAC
JMFS049H12+           AAGACTATCAAGTTTCAGTCTTCAATACAAATACTAGGTCATGCAGGCCAGCAGTTATAC
rJMSF025M17-          AAGACTATCAAGTTTCAGTCTTCAATACAAATACTAGGTCATGCAGGCCAGCAGTTATAC
                      ____________________________________________________________
consensus             AAGACTATCAAGTTTCAGTCTTCAATACAAATACTAGGTCATGCAGGCCAGCAGTTATAC
 
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JMFN041B05+           CAGAAGTCTCGCCGGAAACGGAGCAGCGTCGAATTATACCTGAAGCCTCGCCGAAAAGGG
JMFS049H12+           CAGAAGTCTCGCCGGAAACGGAGCAGCGTCGAATTATACCTGAAGCCTCGCCGAAAAGGG
rJMSF025M17-          CAGAAGTCTCGCCGGAAACGGAGCAGCGTCGAATTATACCTGAAGCCTCGCCGAAAAGGG
                      ____________________________________________________________
consensus             CAGAAGTCTCGCCGGAAACGGAGCAGCGTCGAATTATACCTGAAGCCTCGCCGAAAAGGG
 
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JMFN041B05+           ATCAGCCGAATTATACCTGAAGCCTCGCCGAAAAGGGATCAGCGTCGAATTAGAGCCTAC
JMFS049H12+           ATCAGCCGAATTATACCTGAAGCCTCGCCGAAAAGGGATCAGCGTCGAATTAGAGCCTAC
rJMSF025M17-          ATCAGCCGAATTATACCTGAAGCCTCGCCGAAAAGGGATCAGCGTCGAATTAGAGCCTAC
                      ____________________________________________________________
consensus             ATCAGCCGAATTATACCTGAAGCCTCGCCGAAAAGGGATCAGCGTCGAATTAGAGCCTAC
 
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JMFN041B05+           CAGCAGGGAAAACGTCCAATATCTACTCCACAGCCGTAGCCAAAGCACATGGAAGTGGAA
JMFS049H12+           CAGCAGGGAAAACGTCCAATATCTACTCCACAGCCGTAGCCAAAGCACATGGAAGTGGAA
rJMSF025M17-          CAGCAGGGAAAACGTCCAATATCTACTCCACAGCCGTAGCCAAAGCACATGGAAGTGGAA
                      ____________________________________________________________
consensus             CAGCAGGGAAAACGTCCAATATCTACTCCACAGCCGTAGCCAAAGCACATGGAAGTGGAA
 
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JMFN041B05+           CTTCTTTGCCAAAACCTTCTTGGGCTGTCAAAACATTACCACCAATGTGTATTATATGTC
JMFS049H12+           CTTCTTTGCCAAAACCTTCTTGGGCTGTCAAAACATTACCACCAATGTGTATTATATGTC
rJMSF025M17-          CTTCTTTGCCAAAACCTTCTTGGGCTGTCAAAACATTACCACCAATGTGTATTATATGTC
                      ____________________________________________________________
consensus             CTTCTTTGCCAAAACCTTCTTGGGCTGTCAAAACATTACCACCAATGTGTATTATATGTC
 
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JMFN041B05+           TGTTACACATAGAATACATTACCACCAATGTGTATTCTCTGTCTCTTAGACAAATTTGAA
JMFS049H12+           TGTTACACATAGAATACATTACCACCAATGTGTATTCTCTGTCTCTTAGACAAATTTGAA
rJMSF025M17-          TGTTACACATAGAATACATTACCACCAATGTGTATTCTCTGTCTCTTAGACAAATTTGAA
                      ____________________________________________________________
consensus             TGTTACACATAGAATACATTACCACCAATGTGTATTCTCTGTCTCTTAGACAAATTTGAA
 
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JMFN041B05+           CATC                                                        
JMFS049H12+           CATC                                                        
rJMSF025M17-          CATCTCTGTGGGATTCCCACTGTTAAGTTTGGGGCATATTTTATTCGAAATCATCAACAG
                      ____________________________________________________________
consensus             CATCTCTGTGGGATTCCCACTGTTAAGTTTGGGGCATATTTTATTCGAAATCATCAACAG
 
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rJMSF025M17-          GCATATTTTATTCGAAATCATCAACCTCAACAGCTTGGCTCATATTGCAGTGGTAGAGAT
                      ____________________________________________________________
consensus             GCATATTTTATTCGAAATCATCAACCTCAACAGCTTGGCTCATATTGCAGTGGTAGAGAT
 
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rJMSF025M17-          TATTAGTTTTTATTTGATGCCCCAATTTACGAGATGCCCTGCAAAAAAATAAATATTTAG
                      ____________________________________________________________
consensus             TATTAGTTTTTATTTGATGCCCCAATTTACGAGATGCCCTGCAAAAAAATAAATATTTAG
 
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rJMSF025M17-          TGTTTTCAAATAAAGGAAAACTCATATACTTATTCAAATTGGCAACTAAATCAGTTTTTA
                      ____________________________________________________________
consensus             TGTTTTCAAATAAAGGAAAACTCATATACTTATTCAAATTGGCAACTAAATCAGTTTTTA
 
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rJMSF025M17-          AATAACTGGGACATGTTATAAAAATTTAAGCATAATTGCATACACTTTTTCTTATTAATG
                      ____________________________________________________________
consensus             AATAACTGGGACATGTTATAAAAATTTAAGCATAATTGCATACACTTTTTCTTATTAATG
 
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rJMSF025M17-          TGTACTTAAATTGGCTTATACATGTTCTAAAAAAAATAGAATTAGAAAAAGNGATTACCA
                      ____________________________________________________________
consensus             TGTACTTAAATTGGCTTATACATGTTCTAAAAAAAATAGAATTAGAAAAAGNGATTACCA