Contig 012634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025M01Sequence611012027 (5)ref|XP_002533804.1|2e-70ferulate-5-hydroxylase, putative [Ricinus communis] gb|EEF28573.1| ferulate-5-hy135012634 (3)
JMSF033D09Sequence698012027 (5)emb|CAN73481.1|1e-112hypothetical protein VITISV_026695 [Vitis vinifera]295012634 (3)
JMSF036A05Sequence637012027 (5)ref|XP_007203643.1|8e-76hypothetical protein PRUPE_ppa004260mg [Prunus persica] gb|EMJ04842.1| hypotheti105012634 (3)

Alignment

This contig is upended


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rJMSF033D09+                                                       GNCGTTTTTGGNCTC
                      ____________________________________________________________
consensus                                                          GNCGTTTTTGGNCTC
 
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rJMSF033D09+          NNTGNGCCCCTNGCCGANTGNNTTGTTGCCGTCCCCCCTCCCCNCCTGNTTTGCCCNNTT
                      ____________________________________________________________
consensus             NNTGNGCCCCTNGCCGANTGNNTTGTTGCCGTCCCCCCTCCCCNCCTGNTTTGCCCNNTT
 
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rJMSF033D09+          TANTGNTCCAANTCAAANNTNTTNGTCNAAGGGGAANTTAANTTCNNGCNNATATGGNTC
                      ____________________________________________________________
consensus             TANTGNTCCAANTCAAANNTNTTNGTCNAAGGGGAANTTAANTTCNNGCNNATATGGNTC
 
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rJMSF033D09+          NCAAAAGNTGAACCNACCNGCNAANTAAAGGAAAANGNCGNTTNTTGNGNCGGNTTGGNT
                      ____________________________________________________________
consensus             NCAAAAGNTGAACCNACCNGCNAANTAAAGGAAAANGNCGNTTNTTGNGNCGGNTTGGNT
 
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rJMSF036A05+                            TTTTTTTTTTTTCTTGAACTCGTATCTGTATATGAGATCACT
rJMSF033D09+          TGNTTGGANANTAAGTNNTTTTTTTTTTTTCTTGAACTTGTATCTGTATATGAGATCACT
rJMSF025M01+                            TTTTTTTTTTTTCTTGAACTTGTATCTGTATATGAGATCACT
                      ____________________________________________________________
consensus             TGNTTGGANANTAAGTNNTTTTTTTTTTTTCTTGAACTTGTATCTGTATATGAGATCACT
 
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rJMSF036A05+          CTTTCTCATATTTGGAATGTATACTTTTTT                              
rJMSF033D09+          CTTTCTCATATTTGGAATGTATACTTTTTTGTTTTTG                       
rJMSF025M01+          CTTTCTCATATTTGGAATGTATACTTTTTTGTTTTTGGACATTTCATCACACAAATCATA
                      ____________________________________________________________
consensus             CTTTCTCATATTTGGAATGTATACTTTTTTGTTTTTGGACATTTCATCACACAAATCATA