Contig 012633:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-                                           TCCAATCCGCAGAGGTCACCTTAATATT
                      ____________________________________________________________
consensus                                             TCCAATCCGCAGAGGTCACCTTAATATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           TCTCAACATTACTCGATGCAGCAGGTTCTTGAGGACCTGCAAACTATCTGGGATTGGATT
                      ____________________________________________________________
consensus             TCTCAACATTACTCGATGCAGCAGGTTCTTGAGGACCTGCAAACTATCTGGGATTGGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           TTGACTGAGAAACTGAATATCCCTCAGCATCTAAGACATATGTATGCTGCTATTCTTGTT
                      ____________________________________________________________
consensus             TTGACTGAGAAACTGAATATCCCTCAGCATCTAAGACATATGTATGCTGCTATTCTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           GTTCCAGAGACATTTGATAATCGAGAAATAAAAGAAATGATATCTATTGTTTTACGGGAC
                      ____________________________________________________________
consensus             GTTCCAGAGACATTTGATAATCGAGAAATAAAAGAAATGATATCTATTGTTTTACGGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           TTGCAGTTCAGTTTGACAGTTGTCCACCAGGAAGGCCTTGCTGCAATATTTGGTAATGGT
                      ____________________________________________________________
consensus             TTGCAGTTCAGTTTGACAGTTGTCCACCAGGAAGGCCTTGCTGCAATATTTGGTAATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           TTGCCAACAGCATGTATTGTGAATATGGGTGCTCAGGTGACATCTGTTATTTGCGTTGAG
                      ____________________________________________________________
consensus             TTGCCAACAGCATGTATTGTGAATATGGGTGCTCAGGTGACATCTGTTATTTGCGTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           GATGGAGTAGCTTTACCTTCGACACTGATTAGTCTACGTTACGGTGGAGAGGATATATCA
                      ____________________________________________________________
consensus             GATGGAGTAGCTTTACCTTCGACACTGATTAGTCTACGTTACGGTGGAGAGGATATATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           AGGTGCCTTCTCTGGACTCAGAGACATCATCAAACTTGGCCACCAATTCGTACTGATGCT
                      ____________________________________________________________
consensus             AGGTGCCTTCTCTGGACTCAGAGACATCATCAAACTTGGCCACCAATTCGTACTGATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002G19+                            TTATTAACGCTGAACAAACTTAAAGAGTCCTATTGTATGATC
JMFN028A09-           TTTACAAAGCCTGTAGATTTATTAACGCTGAACAAACTTAAAGAGTCCTATTGTATGATC
rJMSF025J17+                            TTATTAACGCTGAACAAACTTAAAGAGTCCTATTGTATGATC
                      ____________________________________________________________
consensus             TTTACAAAGCCTGTAGATTTATTAACGCTGAACAAACTTAAAGAGTCCTATTGTATGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002G19+          AGAGAGGGAGAGGTTGAAGCGGTTGCTCAGGTTCATTCATATGAAGATGGCATGGTACCT
JMFN028A09-           AGAGAGGGAGAGGTTGAAGCGGTTGCTCAGGTTCATTCATATGAAGATGGCATGGTACCT
rJMSF025J17+          AGAGAGGGAGAGGTTGAAGCGGTTGCTCAGGTTCATTCATATGAAGATGGCATGGTACCT
                      ____________________________________________________________
consensus             AGAGAGGGAGAGGTTGAAGCGGTTGCTCAGGTTCATTCATATGAAGATGGCATGGTACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002G19+          GGATCACACAAGTCAAGGCTAACCGCTCTTAATGTA                        
JMFN028A09-           GGATCACACAAGTCAAGGCTAACCGCTCTTAATGTACCNCC-ATGGGTTTATTNTATCCA
rJMSF025J17+          GGATCACACAAGTCAAGGCTAACCGCTCTTAATGTACCCCCAATGGGTTTATTTTATCCA
                      ____________________________________________________________
consensus             GGATCACACAAGTCAAGGCTAACCGCTCTTAATGTACCCCCAATGGGTTTATTTTATCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN028A09-           ACACTTTTGG                                                  
rJMSF025J17+          ACACTTTTGGTCCCGGATGTGTATCCTCCCCCTCCTCGTTCTTGGTTTAATGACTATGAT
                      ____________________________________________________________
consensus             ACACTTTTGGTCCCGGATGTGTATCCTCCCCCTCCTCGTTCTTGGTTTAATGACTATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          GATATGCTTGAAGATACATGGCATATGGACTTTCCTGGCACCGGTGCATTTCCGATGTGG
                      ____________________________________________________________
consensus             GATATGCTTGAAGATACATGGCATATGGACTTTCCTGGCACCGGTGCATTTCCGATGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          GAGAGCTATCCAATTTTTCAATCCAAACCGAAGAGAGAAGATAATATTGGTCTTGCAGAA
                      ____________________________________________________________
consensus             GAGAGCTATCCAATTTTTCAATCCAAACCGAAGAGAGAAGATAATATTGGTCTTGCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          GCTATTGCGAAAAGCATTCTTTCAACAGCACGCATTGATCTCCAAAGAAAGCTGTTTTGT
                      ____________________________________________________________
consensus             GCTATTGCGAAAAGCATTCTTTCAACAGCACGCATTGATCTCCAAAGAAAGCTGTTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          AGTATGCAACTGATTGGTGGAGTTGCATTGACTGACGGCCTTATTCCTGCCGTCGAGGAA
                      ____________________________________________________________
consensus             AGTATGCAACTGATTGGTGGAGTTGCATTGACTGACGGCCTTATTCCTGCCGTCGAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          AGAGTTTTACACGCGATTCCTTCACATGAAGCAATTGACACAGTCGAGGTATTGCAGTCT
                      ____________________________________________________________
consensus             AGAGTTTTACACGCGATTCCTTCACATGAAGCAATTGACACAGTCGAGGTATTGCAGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          AGAACAAACCCCGCTTTTGTATCATGGAAAGGTGGAGCAGTTCTAGGCATTCTCGATTTC
                      ____________________________________________________________
consensus             AGAACAAACCCCGCTTTTGTATCATGGAAAGGTGGAGCAGTTCTAGGCATTCTCGATTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          ACTCGAGACGGCTGGATTAGTCGAGAGGACTGGATCAGAAGCGGGATCGACACAAGAATC
                      ____________________________________________________________
consensus             ACTCGAGACGGCTGGATTAGTCGAGAGGACTGGATCAGAAGCGGGATCGACACAAGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          AGGAGGAAATACAAGGATTCTTATTATCTTCAGGCACATACAATGGCGTACATAAATTCA
                      ____________________________________________________________
consensus             AGGAGGAAATACAAGGATTCTTATTATCTTCAGGCACATACAATGGCGTACATAAATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J17+          TAGCCTAGTTGCAATACTTTCATTGTACTTTCAGTTCCAACGAAGACTCATTATATATTA
                      ____________________________________________________________
consensus             TAGCCTAGTTGCAATACTTTCATTGTACTTTCAGTTCCAACGAAGACTCATTATATATTA