Contig 012632:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032G01Sequence600012632 (5)ref|XP_009768690.1|9e-24PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMFS037C02Sequence601012632 (5)ref|XP_009768690.1|1e-23PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMFS045H08Sequence613012632 (5)ref|XP_009768691.1|3e-20PREDICTED: uncharacterized protein LOC104219681 isoform X4 [Nicotiana sylvestri
JMSF025F24Sequence617009345 (4)emb|CDP05002.1|4e-49unnamed protein product [Coffea canephora]672012632 (5)ref|XP_009768690.1|3e-26PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMSF047B12Sequence682009345 (4)emb|CDP05002.1|6e-49unnamed protein product [Coffea canephora]102012632 (5)

Alignment

This contig is upended


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rJMSF025F24-                                                          CACCTTTTGAGC
                      ____________________________________________________________
consensus                                                             CACCTTTTGAGC
 
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rJMSF025F24-          AATTGAATACACATCCCTTCTATACCCAAAAAAATACAGTACACCCACCATAAAATAATA
                      ____________________________________________________________
consensus             AATTGAATACACATCCCTTCTATACCCAAAAAAATACAGTACACCCACCATAAAATAATA
 
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rJMSF025F24-          AGTAGGGTATGATCCCCAACAAAATGGGAAATAATCATACTCATCAGACAATGTTTCCAT
                      ____________________________________________________________
consensus             AGTAGGGTATGATCCCCAACAAAATGGGAAATAATCATACTCATCAGACAATGTTTCCAT
 
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rJMSF047B12-                                                          TTCAATCCCATG
rJMSF025F24-          TCTGTAATATAAACCCAACCATCCAATCTCATCTCGTCAACCCGTGATTTCAATCCCATG
                      ____________________________________________________________
consensus             TCTGTAATATAAACCCAACCATCCAATCTCATCTCGTCAACCCGTGATTTCAATCCCATG
 
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rJMSF047B12-          TACNATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGANACCGC
rJMSF025F24-          TACAATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGAGACCGC
                      ____________________________________________________________
consensus             TACAATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGAGACCGC
 
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JMFS037C02+                 CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
JMFS032G01+                 CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
JMFS045H08+                 CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
rJMSF047B12-          ANTGATCCTGCCCTGCTGTAAGCCATGTGC                              
rJMSF025F24-          AGTGATCCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
                      ____________________________________________________________
consensus             AGTGATCCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
 
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JMFS037C02+           CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
JMFS032G01+           CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
JMFS045H08+           CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
rJMSF025F24-          CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
                      ____________________________________________________________
consensus             CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
 
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JMFS037C02+           TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
JMFS032G01+           TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
JMFS045H08+           TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
rJMSF025F24-          TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
                      ____________________________________________________________
consensus             TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
 
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JMFS037C02+           TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
JMFS032G01+           TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
JMFS045H08+           TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
rJMSF025F24-          TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
                      ____________________________________________________________
consensus             TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
 
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JMFS037C02+           ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
JMFS032G01+           ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
JMFS045H08+           ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
rJMSF025F24-          ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
                      ____________________________________________________________
consensus             ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
 
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JMFS037C02+           AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
JMFS032G01+           AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
JMFS045H08+           AGCCATGGGAGTAACAGCAACAGAATGTAAACGTGATGGA                    
rJMSF025F24-          AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
                      ____________________________________________________________
consensus             AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
 
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JMFS037C02+           GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGA           
JMFS032G01+           GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGA           
rJMSF025F24-          GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGAGCTCCTTCTCG
                      ____________________________________________________________
consensus             GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGAGCTCCTTCTCG