Contig 012631:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025F12Sequence687012631 (2)ref|XP_009764116.1|1e-68PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Nicotiana sylvestris]742012631 (2)ref|XP_009764116.1|2e-97PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF025F12-                      GGCAATCAAATTGAAACAGAACACTGGATAAGAAACAATGGCTTCACCC
                      ____________________________________________________________
consensus                        GGCAATCAAATTGAAACAGAACACTGGATAAGAAACAATGGCTTCACCC
 
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JMSF025F12-           CAATCCGACGTCTTCCATTTCGTGATGAAGTCCGGCAACGGAGTGAAGGGCCTCCTCGCC
                      ____________________________________________________________
consensus             CAATCCGACGTCTTCCATTTCGTGATGAAGTCCGGCAACGGAGTGAAGGGCCTCCTCGCC
 
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JMSF025F12-           AAAGGCGTCTCCACGGTGCCTCGCGAATGCGTCCAGCCGCTCGAGGAAAGGATTGACAGG
                      ____________________________________________________________
consensus             AAAGGCGTCTCCACGGTGCCTCGCGAATGCGTCCAGCCGCTCGAGGAAAGGATTGACAGG
 
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JMSF025F12-           GCCGAGCAAGTGAGCGAGGAAGACTCCATTCCGGTCATCGATTTCTCCGATCCGGCGGCG
                      ____________________________________________________________
consensus             GCCGAGCAAGTGAGCGAGGAAGACTCCATTCCGGTCATCGATTTCTCCGATCCGGCGGCG
 
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JMSF025F12-           GCAGAGGCGAAAATCCAGGAAGCTGCGAAGAATTGGGGATTCTTTCAGGTGATCAATCAC
                      ____________________________________________________________
consensus             GCAGAGGCGAAAATCCAGGAAGCTGCGAAGAATTGGGGATTCTTTCAGGTGATCAATCAC
 
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JMSF025F12-           GGAATCCCTCAGCAGGTTCTAGACAAGGTCATCGAAGCAGCTCACGCCTTCTTCGAGCTT
                      ____________________________________________________________
consensus             GGAATCCCTCAGCAGGTTCTAGACAAGGTCATCGAAGCAGCTCACGCCTTCTTCGAGCTT
 
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JMSF025F12-           CCGGCTGTAGAGAAGATGAAATACTTGAGAGGGAACAGTTCCTCTAGCGCCGTGGAGCTT
rJMSF025F12+                                                TTCCTCTAGCGCCGTGGAGCTT
                      ____________________________________________________________
consensus             CCGGCTGTAGAGAAGATGAAATACTTGAGAGGGAACAGTTCCTCTAGCGCCGTGGAGCTT
 
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JMSF025F12-           TTTCACAGCGCCATTGGCGGTGGAGATGACGATAATAAGGTTTTGGAGTGGAGAGACTCT
rJMSF025F12+          TTTCACAGCGCCATTGGCGGTGGAGATGACGATAATAAGGTTTTGGAGTGGAGAGACTCT
                      ____________________________________________________________
consensus             TTTCACAGCGCCATTGGCGGTGGAGATGACGATAATAAGGTTTTGGAGTGGAGAGACTCT
 
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JMSF025F12-           GTGCACCATGAATGCATTCCTGGTGATGATGATGGCAAGTTTTGGCCTCCGGAAACCAGG
rJMSF025F12+          GTGCACCATGAATGCATTCCTGGTGATGATGATGGCAAGTTTTGGCCTCCGGAAACCAGG
                      ____________________________________________________________
consensus             GTGCACCATGAATGCATTCCTGGTGATGATGATGGCAAGTTTTGGCCTCCGGAAACCAGG
 
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JMSF025F12-           GACGAAGTTTTGGAGTTCTCAAAATGGGCAAAACCAATTGGTAGAAGGCTGATAGAAATG
rJMSF025F12+          GACGAAGTTTTGGAGTTCTCAAAATGGGCAAAACCAATTGGTAGAAGGCTGATAGAAATG
                      ____________________________________________________________
consensus             GACGAAGTTTTGGAGTTCTCAAAATGGGCAAAACCAATTGGTAGAAGGCTGATAGAAATG
 
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JMSF025F12-           CTTGTGAGAGGATTGGGTGTGAAGGCAATAGATGAAACACTAGAGCCGGTCTTGATGGGC
rJMSF025F12+          CTTGTGAGAGGATTGGGTGTGAAGGCAATAGATGAAACACTAGAGCCGGTCTTGATGGGC
                      ____________________________________________________________
consensus             CTTGTGAGAGGATTGGGTGTGAAGGCAATAGATGAAACACTAGAGCCGGTCTTGATGGGC
 
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JMSF025F12-           AAGATAGCCGTGACCATGAATTACTACCCGCCATGCCC                      
rJMSF025F12+          AAGATAGCCGTGACCATGAATTACTACCCGCCATGCCCTCCCAACCCTAATCTCACCATC
                      ____________________________________________________________
consensus             AAGATAGCCGTGACCATGAATTACTACCCGCCATGCCCTCCCAACCCTAATCTCACCATC
 
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rJMSF025F12+          GGCTGCCGCCGCCACTGCGACATATGCACCATTACCATGCTCCTCCAAGACGACACCGGC
                      ____________________________________________________________
consensus             GGCTGCCGCCGCCACTGCGACATATGCACCATTACCATGCTCCTCCAAGACGACACCGGC
 
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rJMSF025F12+          GGCCTTTACGTCCGAGGGAGGAATTCCGATAAGTGGGTCCACGTAGAGCCGGTGAGAGGA
                      ____________________________________________________________
consensus             GGCCTTTACGTCCGAGGGAGGAATTCCGATAAGTGGGTCCACGTAGAGCCGGTGAGAGGA
 
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rJMSF025F12+          GCACTGGCGGTTAATGTAGGGAACTCACTTCAATTCATGAGCAATGGTCGATACAAGAGC
                      ____________________________________________________________
consensus             GCACTGGCGGTTAATGTAGGGAACTCACTTCAATTCATGAGCAATGGTCGATACAAGAGC
 
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rJMSF025F12+          GTTGAGCACTGTGCAGCAATTGATTCCTGCAAGACTAGGGTTTCGGTGCCGATGTTCCTG
                      ____________________________________________________________
consensus             GTTGAGCACTGTGCAGCAATTGATTCCTGCAAGACTAGGGTTTCGGTGCCGATGTTCCTG
 
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rJMSF025F12+          AATCCGAGCTTCGATTCCGTCGTCGGACCTTTGCCGGAAACCCTAGATGCCGGAGAGAAG
                      ____________________________________________________________
consensus             AATCCGAGCTTCGATTCCGTCGTCGGACCTTTGCCGGAAACCCTAGATGCCGGAGAGAAG
 
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rJMSF025F12+          CCAGCATATAAGGCATTTCGGTTTTCCGATTACTGGGATTATTTCATGACTACTCGTCCT
                      ____________________________________________________________
consensus             CCAGCATATAAGGCATTTCGGTTTTCCGATTACTGGGATTATTTCATGACTACTCGTCCT
 
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rJMSF025F12+          TCCGTAAAAGCCTCCATTGACTATGCACGCATTTAAATAAATTTGTGTTTTTAAGACTTT
                      ____________________________________________________________
consensus             TCCGTAAAAGCCTCCATTGACTATGCACGCATTTAAATAAATTTGTGTTTTTAAGACTTT