| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018L12 | Sequence | 549 | 007897 (8) | ref|XP_006357843.1| | 4e-26 | PREDICTED: plastidic glucose transporter 4 [Solanum tuberosum] | 660 | 012627 (7) | ref|XP_011099545.1| | 4e-46 | PREDICTED: plastidic glucose transporter 4 isoform X2 [Sesamum indicum] |
| JMFF031G03 | Sequence | 579 | 007897 (8) | ref|XP_006357843.1| | 2e-33 | PREDICTED: plastidic glucose transporter 4 [Solanum tuberosum] | 652 | 012627 (7) | ref|XP_011099545.1| | 2e-57 | PREDICTED: plastidic glucose transporter 4 isoform X2 [Sesamum indicum] |
| JMSF003H21 | Sequence | 253 | 007897 (8) | 797 | 012627 (7) | ref|XP_011099545.1| | 1e-98 | PREDICTED: plastidic glucose transporter 4 isoform X2 [Sesamum indicum] | |||
| JMSF022F20 | Sequence | 690 | 014659 | gb|EYU34419.1| | 4e-42 | hypothetical protein MIMGU_mgv1a0059162mg, partial [Erythranthe guttata] | 378 | 012627 (7) | gb|KDO59059.1| | 4e-41 | hypothetical protein CISIN_1g0091081mg, partial [Citrus sinensis] gb|KDO59060.1| |
| JMSF022K24 | Sequence | 617 | 007897 (8) | ref|XP_009793229.1| | 2e-51 | PREDICTED: plastidic glucose transporter 4 [Nicotiana sylvestris] | 748 | 012627 (7) | ref|XP_011099545.1| | 6e-87 | PREDICTED: plastidic glucose transporter 4 isoform X2 [Sesamum indicum] |
| JMSF024I13 | Sequence | 682 | 007897 (8) | ref|XP_009793229.1| | 3e-58 | PREDICTED: plastidic glucose transporter 4 [Nicotiana sylvestris] | 546 | 012627 (7) | ref|XP_011035084.1| | 160 | PREDICTED: plastidic glucose transporter 4-like [Populus euphratica] |
| JMSF024M08 | Sequence | 658 | 007897 (8) | ref|XP_009793229.1| | 3e-51 | PREDICTED: plastidic glucose transporter 4 [Nicotiana sylvestris] | 651 | 012627 (7) | gb|KDO59059.1| | 2e-52 | hypothetical protein CISIN_1g0091081mg, partial [Citrus sinensis] gb|KDO59060.1| |
This contig is upended
. : . : . : . : . : . :
rJMSF003H21+ GTAGGCGTTATTGGAAAGTTGTCAGTGTTGGTGCAGCATTGTTTTTCTT
____________________________________________________________
consensus GTAGGCGTTATTGGAAAGTTGTCAGTGTTGGTGCAGCATTGTTTTTCTT
. : . : . : . : . : . :
rJMSF003H21+ CCAACAGTTGGCTGGGATTAATGCTGTTGTATACTATTCTACTTCTGTGTTTCGAAGTGC
rJMSF022K24+ CAGTTGGCTGGGATTAATGCTGTTGTATACTATTCTACTTCTGTGTTTCGAAGTGC
____________________________________________________________
consensus CCAACAGTTGGCTGGGATTAATGCTGTTGTATACTATTCTACTTCTGTGTTTCGAAGTGC
. : . : . : . : . : . :
rJMSF003H21+ TGGAATTACATCCGATGTTGCAGCGAGTGCTTTGGTTGGAGCATCCAATGTGTTTGGCAC
rJMSF022K24+ TGGAATTACATCCGATGTTGCAGCGAGTGCTTTGGTTGGAGCATCCAATGTGTTTGGCAC
rJMFF031G03+ C
rJMFF018L12+ TTTGGCNC
rJMSF024I13+ TTTGGCNC
____________________________________________________________
consensus TGGAATTACATCCGATGTTGCAGCGAGTGCTTTGGTTGGAGCATCCAATGTGTTTGGCAC
. : . : . : . : . : . :
rJMSF003H21+ AATTGTTGCATCCTCTTTGATGGATAAGATGGGAAGAAAGAGTCTTTTGCTTACAAGCTT
rJMSF022K24+ AATTGTTGCATCCTCTTTGATGGATAAGATGGGAAGAAAGAGTCTTTTGCTTACAAGCTT
rJMFF031G03+ AATTGTTGCATCCTCTTTGATGGATAAGATGGGAAGAAAGAGTCTTTTGCTTACAAGCTT
rJMFF018L12+ AATTGTTGCATCCTNTTTGATGGATAAGATGGGAAGAAAGAGTTTTTTGCTTACAAGCTT
rJMSF024I13+ AATTGTTGCATCCTCTTTGATGGATAAGATGGGAAGAAAGAGTNTTTTGCTTNCAAGCTT
____________________________________________________________
consensus AATTGTTGCATCCTCTTTGATGGATAAGATGGGAAGAAAGAGTCTTTTGCTTACAAGCTT
. : . : . : . : . : . :
rJMSF003H21+ TTCTGGAATGGCTGCATCAATGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
rJMSF022K24+ TTCTGGAATGGCTGCATCAATGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
rJMFF031G03+ TTCTGGAATGGCTGCATCAATGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
rJMFF018L12+ TTCTGGAANGGCTGCATCAANGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
rJMSF024I13+ TTNTGGAANGGNTGCATCAATGCTATTGCTTTCCCTGTCGTTTACNTGGAAGGCNTTGGC
rJMSF024M08+ GGCTGCATCAATGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
____________________________________________________________
consensus TTCTGGAATGGCTGCATCAATGCTATTGCTTTCCCTGTCGTTTACATGGAAGGCATTGGC
. : . : . : . : . : . :
rJMSF003H21+ ACCATATTCTGGCACACTTGCTGTCGTTGGTACTGTTCTTTATGTGTTATCCTTTTCTCT
rJMSF022K24+ ACCATATTCTGGCACACTTGCTGTCGTTGGTACTGTTCTTTATGTGTTATCCTTTTCTCT
rJMFF031G03+ NCCATATTCTGGCNCACTTGCTGTCGTTGGTACTGTTCTTTATGNGTTATCCTTTTCTCT
rJMFF018L12+ NCCATNTTTTGGCNCNCTTGCTGTCGNTGGTACTGTTNTTTANGNGTTATCCTTTTNTNT
rJMSF024I13+ CCCATNTTTTGGCNCNCTTGCCGTCGNTGGTACTGTTCTTTANGNGTTATCCTTTTNTCT
rJMSF022F20+ GTTATCCTTTTNTCT
rJMSF024M08+ NCCATATTNTGGCACACTTGCTGTCGNTGGTACTGTTCNTTATGNGTTATCCTTTTCTCT
____________________________________________________________
consensus ACCATATTCTGGCACACTTGCTGTCGTTGGTACTGTTCTTTATGTGTTATCCTTTTCTCT
. : . : . : . : . : . :
rJMSF003H21+ TGGCGCTGGTCCTGTGCCTGCTCTTTTACTTCCCGAAATATTTGCCTCTAGAATTAGGGC
rJMSF022K24+ TGGCGCTGGTCCTGTGCCTGCTCTTTTACTTCCCGAAATATTTGCCTCTAGAATTAGGGC
rJMFF031G03+ TGGCGCTGGTCCTGTGCCTGCTCTTTTACTTCCCGAAATATTTGCCTNTAGAATTAGGGC
rJMFF018L12+ TGGCGNTGGTCCTGNGCCTGCTNTTTTACTTCCCGAAATATTTGCCTTTAGAATTAGGGN
rJMSF024I13+ TGGCGCTGGTCCNGNGCCNGCTNTTTTACTTCCCGAAANATTTGCCTNTAGAATTAGGGN
rJMSF022F20+ TGGCGCNGGTCCNGTGCCTGCTNTTTTACTTCCCNAAANATTTGCCTNTAGAANTAGGGC
rJMSF024M08+ TGGCGCTGGTCCTGTGCCTGCTCTTTTACTTCCCGAAATATTTGCCTCTAGAATTAGGGC
____________________________________________________________
consensus TGGCGCTGGTCCTGTGCCTGCTCTTTTACTTCCCGAAATATTTGCCTCTAGAATTAGGGC
. : . : . : . : . : . :
rJMSF003H21+ GAAAGCAATGGCATTGTCCTTGGGAACGCATTGGATATTAAATTTTGCGATTGGGCTCTA
rJMSF022K24+ GAAAGCAATGGCATTGTCCTTGGGAACGCATTGGATATTAAATTTTGCGATTGGGCTCTA
rJMFF031G03+ GAAAGCAATGGCATTGTCCTTGGGAACGCATTGGATATTAAATTTTGCGATTGGGCTNTA
rJMFF018L12+ GAAAGCAANGGCATTGTCCTTGGGAACGCATTGGATATTAAATTTTGNGATTGGGCTTTN
rJMSF024I13+ GAAAGCAANGGCNTTNTCCTTGGGAACNCNTTGGATATTAAATTTTGNGATTGGGCTNTA
rJMSF022F20+ GAAAGCAATGGCATTGTCCTTGGGAANNCATTGGATANTAAATTTTGCGNNTGGGCTNTA
rJMSF024M08+ GAAAGCAATGGCNTTGTCCTTGGGAACNCNTTGGATATTAAATTTTGCGATTGGGCTNTA
____________________________________________________________
consensus GAAAGCAATGGCATTGTCCTTGGGAACGCATTGGATATTAAATTTTGCGATTGGGCTCTA
. : . : . : . : . : . :
rJMSF003H21+ CTTCCTGAGCATTGTTAATAAATTTGGAATCAGCACGGTGTACCTGGGGTTTGCAACCGC
rJMSF022K24+ CTTCCTGAGCATTGTTAATAAATTTGGAATCAGCACGGTGTACCTGGGGTTTGCAACCGC
rJMFF031G03+ CTTCCTGAGCATTGTTAATAAATTTGGAATCAGCNCGGTGTACCTGGGGTTTGCAACCGC
rJMFF018L12+ CTTCCTGAGCATTGTTAATAAATTTGGAATCAGCNCGGNGTNCCTGGGGTTTGCAACCGC
rJMSF024I13+ CTTCCTGAGCNTTGTTAANAAATTTGGAATCAGCCCGGNGTACCTGGGGTTTGCAACCNC
rJMSF022F20+ CTTCCTGAGCNTTGNTAANAAATTTGGAATCAGCACNGTGTACCTGGGGTTTNCAACCGC
rJMSF024M08+ CTTCCTGAGCNTTGTTAATAAATTTGGAATCAGCCCGGNGTACCTGGGGTTTGCAACCNC
____________________________________________________________
consensus CTTCCTGAGCATTGTTAATAAATTTGGAATCAGCACGGTGTACCTGGGGTTTGCAACCGC
. : . : . : . : . : . :
rJMSF003H21+ ATGTATTCTTGCAGTAATGTACATAGGTGCTAATGTGGTTGAGACCAAGGGTCGATCACT
rJMSF022K24+ ATGTATTCTTGCAGTAATGTACATAGGTGCTAATGTGGTTGAGACCAAGGGTCGATCACT
rJMFF031G03+ ATGTATTNTTGCAGTAATGTACATAGGTGCTAATGTGGTTGAGACCAAGGGTCGATCACT
rJMFF018L12+ ANGTATTTTTGCAGTAANGTACATAGGNGNTAANGNGGNTGAGACCAAGGGTCGATCNCT
rJMSF024I13+ NTGTATTNTTGCNGTAANGTACATAGGNGCTAANGTGGTTGAGACCNAGGGTCGATCNCT
rJMSF022F20+ ATGTATTCTTGCNGTAATGTACATAGGTGCTAANGNGGNTGAGACCAAGGGNCGATCNCT
rJMSF024M08+ ATGTATTCTTGCNGTAANGTACATAGGNGCTAANGTGGTTGAGACCAAGGGTCGATCNCT
____________________________________________________________
consensus ATGTATTCTTGCAGTAATGTACATAGGTGCTAATGTGGTTGAGACCAAGGGTCGATCACT
. : . : . : . : . : . :
rJMSF003H21+ TGAGGAGATTGAGCGTGCTCTTAGTCCTGCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
rJMSF022K24+ TGAGGAGATTGAGCGTGCTCTTAGTCCTGCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
rJMFF031G03+ TGAGGAGATTGAGCGTGCTNTTAGTCCTGCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
rJMFF018L12+ TGAGGAGATTGAGCGTGCTTTTAGTCCTGCCGTTTGAANGAAAGAATAAGTTAAGAGAGA
rJMSF024I13+ TGAGGNGATTGAGCGTGCTTTTAGTCCTNCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
rJMSF022F20+ TGAGGAGATTGAGCGTGCTCTTAGTCCNGCCGNTTGAATGAAAGAATAAGTTAAGNGAGA
rJMSF024M08+ TGAGGAGATTGAGCGTGCTNTTAGTCCTGCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
____________________________________________________________
consensus TGAGGAGATTGAGCGTGCTCTTAGTCCTGCCGTTTGAATGAAAGAATAAGTTAAGAGAGA
. : . : . : . : . : . :
rJMSF003H21+ GCTGCAAGGAAGTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAAGCTTTCCG
rJMSF022K24+ GCTGCAAGGAAGTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAAGCTTTCCG
rJMFF031G03+ GCTGCAAGGAAGTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAAGCTTTCCG
rJMFF018L12+ NCTGCAAGGAANTGGTGGAGTGGAGGAGGGATTGGATTAGNGAAANCTTTCCG
rJMSF024I13+ GCNNCAAGGAANTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAANCTTTCCGAT
rJMSF022F20+ GCTGCAAGGAAGNGGNGGAGTGGAGGAGGGATTGGATTAGTGAAANCTTTCCGAT
rJMSF024M08+ GCTGCAAGGAAGTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAAGCTTTCCGGTAAGNG
____________________________________________________________
consensus GCTGCAAGGAAGTGGTGGAGTGGAGGAGGGATTGGATTAGTGAAAGCTTTCCGATAAGNG
. : . : . : . : . : . :
rJMSF024M08+ TTTAACCCCAACCNTTTTGCNGTTGNGTTTATTCCNGCTTGTAATTAGCGTCTCGTATCT
____________________________________________________________
consensus TTTAACCCCAACCNTTTTGCNGTTGNGTTTATTCCNGCTTGTAATTAGCGTCTCGTATCT
. : . : . : . : . : . :
rJMSF024M08+ ATAACTCTTGACNGATTGTCGTAACNCTGGACGACNCTGATCTGTGGGCTGNGGCNTTTT
____________________________________________________________
consensus ATAACTCTTGACNGATTGTCGTAACNCTGGACGACNCTGATCTGTGGGCTGNGGCNTTTT
. : . : . : . : . : . :
rJMSF024M08+ GCTGTCCGATTCTTGTTTCAATTTTCCGGTTATCAAATTTTTTTTTTTTTAAATAATCTA
____________________________________________________________
consensus GCTGTCCGATTCTTGTTTCAATTTTCCGGTTATCAAATTTTTTTTTTTTTAAATAATCTA