Contig 012626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024K07Sequence657012626 (2)ref|XP_009802675.1|1e-51PREDICTED: GATA transcription factor 12 [Nicotiana sylvestris]728012626 (2)ref|XP_009628152.1|1e-62PREDICTED: GATA transcription factor 12-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024K07- GAGCGGTTACTTTTTCAAATTTTGAGGCGAAATAC
                      ____________________________________________________________
consensus GAGCGGTTACTTTTTCAAATTTTGAGGCGAAATAC
 
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JMSF024K07- ATTCACATTTTCTGTAATGGAAGCACGAGAATTCGTCATTGGCGGCGGCTTTTTGGGGGC
                      ____________________________________________________________
consensus ATTCACATTTTCTGTAATGGAAGCACGAGAATTCGTCATTGGCGGCGGCTTTTTGGGGGC
 
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JMSF024K07- TGCCGCCGGGGAGTCACAATATGGTTGCGAAAACCGTTACCTAGTGGAACATAAGTCCGC
                      ____________________________________________________________
consensus TGCCGCCGGGGAGTCACAATATGGTTGCGAAAACCGTTACCTAGTGGAACATAAGTCCGC
 
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JMSF024K07- GGAGCACAGCCTCAATGCTAACAATTTCACCGTCGATGAGCTTCTCGACTTCTCAAAACA
                      ____________________________________________________________
consensus GGAGCACAGCCTCAATGCTAACAATTTCACCGTCGATGAGCTTCTCGACTTCTCAAAACA
 
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JMSF024K07- CGACGAGGTCACCGCCGACGATTTCTTCGACGACAGTGCTGCAGGCCGCTCCTCCACCGT
                      ____________________________________________________________
consensus CGACGAGGTCACCGCCGACGATTTCTTCGACGACAGTGCTGCAGGCCGCTCCTCCACCGT
 
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JMSF024K07- CGCTGCTGTCGACAGCTGTAAATCCGGCGGCCAATTCAGCGGTAATTTTAGCTGCGGTAG
                      ____________________________________________________________
consensus CGCTGCTGTCGACAGCTGTAAATCCGGCGGCCAATTCAGCGGTAATTTTAGCTGCGGTAG
 
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JMSF024K07- CTTCACCGACACCCCTTTCAGCACTTCCGAGCTTTGCATTCCGTATGATGATTTGGCGGA
                      ____________________________________________________________
consensus CTTCACCGACACCCCTTTCAGCACTTCCGAGCTTTGCATTCCGTATGATGATTTGGCGGA
 
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JMSF024K07- GCTGGAATGGTTGTCGAACTTCGTGGAGGACTCATTCTCGAGCGACGAGGTTCAAAATCT
                      ____________________________________________________________
consensus GCTGGAATGGTTGTCGAACTTCGTGGAGGACTCATTCTCGAGCGACGAGGTTCAAAATCT
 
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JMSF024K07- TCAGCTAATTTTGGCCACAAAAACTTCCGCCACCGCCGCTGATTCTTCCTCCTCCGCCTC
                      ____________________________________________________________
consensus TCAGCTAATTTTGGCCACAAAAACTTCCGCCACCGCCGCTGATTCTTCCTCCTCCGCCTC
 
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JMSF024K07- CGCCAGCGCCAATTGCAAGGAAATCGGCAACAATTATTCACTTCCGGCATTCCCTAATTC
rJMSF024K07+ CCTAATTC
                      ____________________________________________________________
consensus CGCCAGCGCCAATTGCAAGGAAATCGGCAACAATTATTCACTTCCGGCATTCCCTAATTC
 
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JMSF024K07- CGACGTCTCAGTTCCCGGCAAAGCGCGCAGCAAACGTTCCCGCGCCGCGCCCTGGGACTG
rJMSF024K07+ NGACGTNTCAGTTCCCGGCAAAGCGCGCAGCAAACGTTCCCGCGCCGCGCCCTGGGACTG
                      ____________________________________________________________
consensus CGACGTCTCAGTTCCCGGCAAAGCGCGCAGCAAACGTTCCCGCGCCGCGCCCTGGGACTG
 
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JMSF024K07- GTCGTCCCGCATCCTGCTCCTT
rJMSF024K07+ GTCGTCCCGCATCCTGCTCCTTTCCCCAGAGAAGTCACAGTCGGAGAGCAAGAACAACGC
                      ____________________________________________________________
consensus GTCGTCCCGCATCCTGCTCCTTTCCCCAGAGAAGTCACAGTCGGAGAGCAAGAACAACGC
 
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rJMSF024K07+ ATCGGCTCCGAAAGCGTCGGCGGCGTCTAAAAGAAGAGAAAGCTGCAACGAGACTCAAGG
                      ____________________________________________________________
consensus ATCGGCTCCGAAAGCGTCGGCGGCGTCTAAAAGAAGAGAAAGCTGCAACGAGACTCAAGG
 
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rJMSF024K07+ GCGGAAGTGCCTGCACTGTGCGTCTGAAAAGACGCCCCAGTGGCGGACCGGGCCAATGGG
                      ____________________________________________________________
consensus GCGGAAGTGCCTGCACTGTGCGTCTGAAAAGACGCCCCAGTGGCGGACCGGGCCAATGGG
 
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rJMSF024K07+ GCCTAAGACGCTTTGCAACGCGTGTGGGGTCCGATACAAATCGGGGCGTCTGGTGCCCGA
                      ____________________________________________________________
consensus GCCTAAGACGCTTTGCAACGCGTGTGGGGTCCGATACAAATCGGGGCGTCTGGTGCCCGA
 
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rJMSF024K07+ ATACCGACCCGCGGCCAGCCCCACATTCGTCTCCACCAAACACTCCAACTCCCACCGCAA
                      ____________________________________________________________
consensus ATACCGACCCGCGGCCAGCCCCACATTCGTCTCCACCAAACACTCCAACTCCCACCGCAA
 
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rJMSF024K07+ GGTCCTGGAGCTCCGCCGCCAAAACGACCTCCACCTCCACCACCAGCAACAGTTGCTCAG
                      ____________________________________________________________
consensus GGTCCTGGAGCTCCGCCGCCAAAACGACCTCCACCTCCACCACCAGCAACAGTTGCTCAG
 
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rJMSF024K07+ TCAAGCCTCCATCTTCGGCGGCGATGCCTACTTGCTTCACCGTCAACAATCATGCGGCCC
                      ____________________________________________________________
consensus TCAAGCCTCCATCTTCGGCGGCGATGCCTACTTGCTTCACCGTCAACAATCATGCGGCCC
 
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rJMSF024K07+ TGACTATACGCACATGATCTAGCCCCCAATCAGCTTCCAGTACGTACATTTATGCTCCAA
                      ____________________________________________________________
consensus TGACTATACGCACATGATCTAGCCCCCAATCAGCTTCCAGTACGTACATTTATGCTCCAA
 
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rJMSF024K07+ GTAACATTATTGAAAAAGCAACTCCATCAATTTTCCTAATTTACGATATTACTCCTATCC
                      ____________________________________________________________
consensus GTAACATTATTGAAAAAGCAACTCCATCAATTTTCCTAATTTACGATATTACTCCTATCC
 
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rJMSF024K07+ TATCTCGAGGAAGGTGCAGTGAAGAACCAAATACAACTGAATTCAGAATTCTGTAATTCT
                      ____________________________________________________________
consensus TATCTCGAGGAAGGTGCAGTGAAGAACCAAATACAACTGAATTCAGAATTCTGTAATTCT
 
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rJMSF024K07+ TTCGCTAATTAATAATTACGTTAAGTTTTTCTTCATGTACAACAGCGTTACTTGGATTAT
                      ____________________________________________________________
consensus TTCGCTAATTAATAATTACGTTAAGTTTTTCTTCATGTACAACAGCGTTACTTGGATTAT