Contig 012616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023C13Sequence642012616 (2)ref|XP_004239824.1|296PREDICTED: uncharacterized protein LOC101248579 [Solanum lycopersicum]751012616 (2)ref|XP_006365851.1|113PREDICTED: uncharacterized protein LOC102591771 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF023C13-             GGCTTGCCGCTGCTATCAAGGCAAACTCGAGTTAGATCAATCGTCGAAAGAATGGAAT
                      ____________________________________________________________
consensus               GGCTTGCCGCTGCTATCAAGGCAAACTCGAGTTAGATCAATCGTCGAAAGAATGGAAT
 
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JMSF023C13-           TCGGATTAAAAAATTGCTGAAACCAAACACTAGGGTTTCAATGGATGCACTGAAACAATG
                      ____________________________________________________________
consensus             TCGGATTAAAAAATTGCTGAAACCAAACACTAGGGTTTCAATGGATGCACTGAAACAATG
 
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JMSF023C13-           CGACGCGAATTTTGTGGTATATCTGCACCCATCTAAGTCCAAGCATGTCAAGGATGCGGT
                      ____________________________________________________________
consensus             CGACGCGAATTTTGTGGTATATCTGCACCCATCTAAGTCCAAGCATGTCAAGGATGCGGT
 
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JMSF023C13-           CTATCGTGAACTAAGCTCCCTGCTTTTCAAGTTTGATGAAGCTTTAGATGGCGTGGTACT
                      ____________________________________________________________
consensus             CTATCGTGAACTAAGCTCCCTGCTTTTCAAGTTTGATGAAGCTTTAGATGGCGTGGTACT
 
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JMSF023C13-           GGCCTACGAACCAAAGTTTGATAGTAATTTGGCAAAAATTCTACCGGGAATTCACCCATA
                      ____________________________________________________________
consensus             GGCCTACGAACCAAAGTTTGATAGTAATTTGGCAAAAATTCTACCGGGAATTCACCCATA
 
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JMSF023C13-           TTTTGGTGTGAGGTTTCAAGCAAAGTTGTTACTCTTTAATCCAAAGCTGGATATGCTTTT
                      ____________________________________________________________
consensus             TTTTGGTGTGAGGTTTCAAGCAAAGTTGTTACTCTTTAATCCAAAGCTGGATATGCTTTT
 
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JMSF023C13-           AGAAGGAGAGGTAGTGAAAGTGTGTCAACAGTCTATTCACATAGTTATTCTTGGATTTTC
                      ____________________________________________________________
consensus             AGAAGGAGAGGTAGTGAAAGTGTGTCAACAGTCTATTCACATAGTTATTCTTGGATTTTC
 
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JMSF023C13-           ATCTGCCATTATAGCGGATGAGGACGTTCGCGGAAAATTCAAATATAAGATTAAAAATGG
rJMSF023C13+                                         GGAAAATTCAAATATAAGATTAAAAATGG
                      ____________________________________________________________
consensus             ATCTGCCATTATAGCGGATGAGGACGTTCGCGGAAAATTCAAATATAAGATTAAAAATGG
 
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JMSF023C13-           TGAGGAAGTGTTTGTCAGCAAATCTCACAGGAGACATAAGATTAAATCGGGAACAGTTGT
rJMSF023C13+          TGAGGAAGTGTTTGTCAGCAAATCTCNCNGGAGACATAAGATTAAATCGGGAACAGTTGT
                      ____________________________________________________________
consensus             TGAGGAAGTGTTTGTCAGCAAATCTCACAGGAGACATAAGATTAAATCGGGAACAGTTGT
 
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JMSF023C13-           ACGTTTCTCTGTCAAGAGTTTTGATGAAGAGATACTACACATATGTGGATCATTAATTCC
rJMSF023C13+          ACGTTTCTCTGTCAAGAGTTTTGATGAAGAGATACTACACATATGTGGATCATTAATTCC
                      ____________________________________________________________
consensus             ACGTTTCTCTGTCAAGAGTTTTGATGAAGAGATACTACACATATGTGGATCATTAATTCC
 
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JMSF023C13-           TGCTGATACTGGAAATGTTAGTTGGTTGGAATCAAATAGAGAAG                
rJMSF023C13+          TGCTGATACTGGAAATGTTAGTTGGTTGGAATCAAATAGAGAAGCACAGACAGNGAGTGA
                      ____________________________________________________________
consensus             TGCTGATACTGGAAATGTTAGTTGGTTGGAATCAAATAGAGAAGCACAGACAGNGAGTGA
 
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rJMSF023C13+          CCCTAAAAAGAGTGGAAGTAAGAGGCCAGTGGAAAAACTGGAGTATGGCAACGGAAGGAT
                      ____________________________________________________________
consensus             CCCTAAAAAGAGTGGAAGTAAGAGGCCAGTGGAAAAACTGGAGTATGGCAACGGAAGGAT
 
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rJMSF023C13+          AGGTGAAGAAAATATGAATGCAGATAATCAACCTAAGAAATNTAAGNGACGCAAAACTGG
                      ____________________________________________________________
consensus             AGGTGAAGAAAATATGAATGCAGATAATCAACCTAAGAAATNTAAGNGACGCAAAACTGG
 
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rJMSF023C13+          AGTGAGTTGATTTGGCCNCAAGTTGGAATATTTTTAGCTTTGTCTNTACAAGGCAGGGGA
                      ____________________________________________________________
consensus             AGTGAGTTGATTTGGCCNCAAGTTGGAATATTTTTAGCTTTGTCTNTACAAGGCAGGGGA
 
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rJMSF023C13+          ACAATTATGCTTCTGTTCTTCTCATTTTTGTGCTCTAGATTCCTAAGTTCATACTTGGGC
                      ____________________________________________________________
consensus             ACAATTATGCTTCTGTTCTTCTCATTTTTGTGCTCTAGATTCCTAAGTTCATACTTGGGC
 
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rJMSF023C13+          CTGAAAATCTTTAACCNCATTTAACTAGNGAATAGGAACCCAATGATCCATCTTGCTATT
                      ____________________________________________________________
consensus             CTGAAAATCTTTAACCNCATTTAACTAGNGAATAGGAACCCAATGATCCATCTTGCTATT
 
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rJMSF023C13+          TTGGACCTTACTGCCTTTCTTGTATATGCCTCATCCNCNGTCCATTTGGACAGAATGCAG
                      ____________________________________________________________
consensus             TTGGACCTTACTGCCTTTCTTGTATATGCCTCATCCNCNGTCCATTTGGACAGAATGCAG
 
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rJMSF023C13+          ATTTATGTACTTGTTAAAACNTTGCTAATGTATTATGTATACNTTGCTAGTCTTACTTTC
                      ____________________________________________________________
consensus             ATTTATGTACTTGTTAAAACNTTGCTAATGTATTATGTATACNTTGCTAGTCTTACTTTC
 
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rJMSF023C13+          ATTCCAAAACTGTTAAAACCTCTATTGGCTGTTAACNCCCAGCAAGCTTCAACNCCTTAG
                      ____________________________________________________________
consensus             ATTCCAAAACTGTTAAAACCTCTATTGGCTGTTAACNCCCAGCAAGCTTCAACNCCTTAG
 
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rJMSF023C13+          NGAAAAGAAGNGATTTTTTTTTTTCTTCTGTTAATCATCAATCTGTCATGTTCTAAATAC
                      ____________________________________________________________
consensus             NGAAAAGAAGNGATTTTTTTTTTTCTTCTGTTAATCATCAATCTGTCATGTTCTAAATAC