Contig 012615:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040F24+                               GACCAGAGGACAAGATTTATCGGATTCAAAACAGCTGCA
                      ____________________________________________________________
consensus                                  GACCAGAGGACAAGATTTATCGGATTCAAAACAGCTGCA
 
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rJMSF040F24+          GAACCCAGATTTTCGTGTCGTTTCCCACTCAAGGAATGGTTAATGGCAGTAGTAATGCTA
rJMSF023A10+                                         AGGAATGGTTAATGGCAGTAGTAATGCTA
                      ____________________________________________________________
consensus             GAACCCAGATTTTCGTGTCGTTTCCCACTCAAGGAATGGTTAATGGCAGTAGTAATGCTA
 
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rJMSF040F24+          CTAGAGCTGGACAAACCATTGAAGCCTCAAAACAACTACATGTTCCTCACATAGCATCAG
rJMSF023A10+          CTAGAGCTGGACAAACCATTGAAGCCTCAAAACAACTACATGTTCCTCACATAGCATCAG
                      ____________________________________________________________
consensus             CTAGAGCTGGACAAACCATTGAAGCCTCAAAACAACTACATGTTCCTCACATAGCATCAG
 
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rJMSF040F24+          AGAACCAGCAACTATCTTTCCTGCTTCCCCAGAATCGTTATTCATCTGCTTCTTTTGGCC
rJMSF023A10+          AGAACCAGCAACTATCTTTCCTGCTTCCCCAGAATCGTTATTCATCTGCTTCTTTTGGCC
                      ____________________________________________________________
consensus             AGAACCAGCAACTATCTTTCCTGCTTCCCCAGAATCGTTATTCATCTGCTTCTTTTGGCC
 
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rJMSF040F24+          CGCTTTCTTCAACAGCTGCAGCTCATCAGGTTCTATTGCCACAAGTTGGGAATGCAGACG
rJMSF023A10+          CGCTTTCTTCAACAGCTGCAGCTCATCAGGTTCTATTGCCACAAGTTGGGAATGCAGACG
                      ____________________________________________________________
consensus             CGCTTTCTTCAACAGCTGCAGCTCATCAGGTTCTATTGCCACAAGTTGGGAATGCAGACG
 
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rJMSF040F24+          CCACAGTTCCACCAAGACTACAACTCCACAGGCAAGAAATACAAATTTGGCCTACCCACC
rJMSF023A10+          CCACAGTTCCACCAAGACTACAACTCCACAGGCAAGAAATACAAATTTGGCCTACCCACC
                      ____________________________________________________________
consensus             CCACAGTTCCACCAAGACTACAACTCCACAGGCAAGAAATACAAATTTGGCCTACCCACC
 
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rJMSF040F24+          TCACAGCTGCATACAAGCATGGTGAAGTCGGTGCCTCCCATATACCGGAGTGGCAAAACG
rJMSF023A10+          TCACAGCTGCATACAAGCATGGTGAAGTCGGTGCCTCCCATATACCGGAGTGGCAAAACG
                      ____________________________________________________________
consensus             TCACAGCTGCATACAAGCATGGTGAAGTCGGTGCCTCCCATATACCGGAGTGGCAAAACG
 
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rJMSF040F24+          GAGGACAAAACACGCATCCCCTTCTCCAATCCGCTCAAACCATGTTCCCAGGCTCTCGTT
rJMSF023A10+          GAGGACAAAACACGCATCCCCTTCTCCAATCCGCTCAAACCATGTTCCCAGGCTCTCGTT
                      ____________________________________________________________
consensus             GAGGACAAAACACGCATCCCCTTCTCCAATCCGCTCAAACCATGTTCCCAGGCTCTCGTT
 
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rJMSF040F24+          CTTCCTTGGACACGCTTCCCTCCAAGCACGCTCCCATCTCACTTGAACAGCAGCAGCGGC
rJMSF023A10+          CTTCCTTGGACACGCTTCCCTCCAAGCACGCTCCCATCTCACTTGAACAGCAGCAGCGGC
                      ____________________________________________________________
consensus             CTTCCTTGGACACGCTTCCCTCCAAGCACGCTCCCATCTCACTTGAACAGCAGCAGCGGC
 
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rJMSF040F24+          TTATGCCCATTTCCTCATCGCTATCAGGCTCAAGGGTAAGAGGACAGTACTATCGTTTAC
rJMSF023A10+          TTATGCCCATTTCCTCATCGCTATCAGGCTCAAGGGTAAGAGGACAGTACTATCGTTTAC
                      ____________________________________________________________
consensus             TTATGCCCATTTCCTCATCGCTATCAGGCTCAAGGGTAAGAGGACAGTACTATCGTTTAC
 
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rJMSF040F24+          CTGATGGCTTTGAAGGGAATGCCCGGGGACTCTACCCGAACAGCATCCCAGCGTTGCAAA
rJMSF023A10+          CTGATGGCTTTGAAGGGAATGCCCGGGGACTCTACCCGAACAGCATCCCAGCGTTGCAAA
                      ____________________________________________________________
consensus             CTGATGGCTTTGAAGGGAATGCCCGGGGACTCTACCCGAACAGCATCCCAGCGTTGCAAA
 
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rJMSF040F24+          TGCTCTGCAATGGTCACCATTAGAACGATCACCATTGATTTATTCTTTTCTTTTTGTAGA
rJMSF023A10+          TGCTCTGCAATGGTCACCATTAGAACGATCACCATTGATTTATTCTTTTCTTTTTGTAGA
                      ____________________________________________________________
consensus             TGCTCTGCAATGGTCACCATTAGAACGATCACCATTGATTTATTCTTTTCTTTTTGTAGA
 
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rJMSF040F24+          TGCATATTGAGCAAGAACTAATGCCAGTAGCCAGTGTTGAGCACACACACATATATATAT
rJMSF023A10+          TGCATATTGAGCAAGAACTAATGCCAGTAGCCAGTGTTGAGCACACATACATATATATAT
                      ____________________________________________________________
consensus             TGCATATTGAGCAAGAACTAATGCCAGTAGCCAGTGTTGAGCACACATACATATATATAT
 
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rJMSF040F24+          TGAAAAATTCTTATGGTATCTGTTATTACCC                             
rJMSF023A10+          TGAAAAATTCTTATGGTATCTGTTNTTACCCNTTTTAGCAATTGAANGATCAGAAAAAAC
                      ____________________________________________________________
consensus             TGAAAAATTCTTATGGTATCTGTTATTACCCNTTTTAGCAATTGAANGATCAGAAAAAAC