Contig 012613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022K23Sequence566012613 (2)789012613 (2)ref|XP_009623152.1|4e-41PREDICTED: uncharacterized protein LOC104114410 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF022K23-                       GACTACTAGACTGCTTTTCAGTGTTTTTCCATTTTGTTTATCTTCTCT
                      ____________________________________________________________
consensus                         GACTACTAGACTGCTTTTCAGTGTTTTTCCATTTTGTTTATCTTCTCT
 
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JMSF022K23-           ATACTCTCCTTCCATTCTCGGCAGTATTCTTTGCCCTTCACTCATGGTGTAGAGATTCAT
                      ____________________________________________________________
consensus             ATACTCTCCTTCCATTCTCGGCAGTATTCTTTGCCCTTCACTCATGGTGTAGAGATTCAT
 
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JMSF022K23-           CTCCTTAAATCTCTGCTCAAAAGCTGAAATCTTTCGTCACTGGCGCTGATTTTCTGATCT
                      ____________________________________________________________
consensus             CTCCTTAAATCTCTGCTCAAAAGCTGAAATCTTTCGTCACTGGCGCTGATTTTCTGATCT
 
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JMSF022K23-           GGGTTTTCTTTATTTCCCCCCTTGGATCAAGTTTTTCCCAACCTTGCACCACCTACAAAA
rJMSF022K23+                                                                   AAA
                      ____________________________________________________________
consensus             GGGTTTTCTTTATTTCCCCCCTTGGATCAAGTTTTTCCCAACCTTGCACCACCTACAAAA
 
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JMSF022K23-           GCATTCCGTTTTGCATCCGTTAACGCATTCAAAGTATTAAACCCCGGAAGTATGAAAATC
rJMSF022K23+          GCATTCCGTTTTGCATCCGNTAACGCATTCAAAGTATTAANCCCCGGAAGTATGAAAATC
                      ____________________________________________________________
consensus             GCATTCCGTTTTGCATCCGTTAACGCATTCAAAGTATTAAACCCCGGAAGTATGAAAATC
 
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JMSF022K23-           TGATTTTTGGTATCTTAATTGGATTTGGAGACGTGAGTTTGGGGTTGAAGATGCAAGTAT
rJMSF022K23+          TGATTTTTGGTATCTTAATTGGATTTGGAGACGTGAGTTTGGGGTTGAAGATGCAAGTAT
                      ____________________________________________________________
consensus             TGATTTTTGGTATCTTAATTGGATTTGGAGACGTGAGTTTGGGGTTGAAGATGCAAGTAT
 
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JMSF022K23-           TGGCAGTTTTGAGGGAGGTCTGCTTCAATACTATTCATGTTCTGGTGCTTTCATATGGAC
rJMSF022K23+          TGGCAGTTTTGAGGGAGGTCTGCTTCAATACTATTCATGTTCTGGTGCTTTCATATGGAC
                      ____________________________________________________________
consensus             TGGCAGTTTTGAGGGAGGTCTGCTTCAATACTATTCATGTTCTGGTGCTTTCATATGGAC
 
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JMSF022K23-           AAGAGTAACAAGGCAGTTGTTTGTGATAGAAATTTAGCTGAGTAAAGTTTTCGGTTTTGG
rJMSF022K23+          AAGAGTAACAAGGCAGTTGTTTGTGATAGAAATTTAGCTGAGTAAAGTTTTCGGTTTTGG
                      ____________________________________________________________
consensus             AAGAGTAACAAGGCAGTTGTTTGTGATAGAAATTTAGCTGAGTAAAGTTTTCGGTTTTGG
 
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JMSF022K23-           AGAATGGGGAGAGGAAGAGGAAAGGGAAAGAAACAATCGCTTCGTGAAGATCTTGGAAGT
rJMSF022K23+          AGAATGGGGAGAGGAAGAGGAAAGGGAAAGAAACAATCGCTTCGTGAAGATCTTGGAAGT
                      ____________________________________________________________
consensus             AGAATGGGGAGAGGAAGAGGAAAGGGAAAGAAACAATCGCTTCGTGAAGATCTTGGAAGT
 
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JMSF022K23-           GGTGAGGAAGAGAAGATACCGCCAGTTAGGAGAAGAGG                      
rJMSF022K23+          GGTGAGGAAGAGAAGATACCGCCAGTTAGGAGAAGAGGAAGACCGATGAAACCAGTGAAG
                      ____________________________________________________________
consensus             GGTGAGGAAGAGAAGATACCGCCAGTTAGGAGAAGAGGAAGACCGATGAAACCAGTGAAG
 
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rJMSF022K23+          GATGATGTAGAGGAAGAAGAGGATGAAGTGGAGAAGGTTGTAGAAGATGAAGAGGACGAT
                      ____________________________________________________________
consensus             GATGATGTAGAGGAAGAAGAGGATGAAGTGGAGAAGGTTGTAGAAGATGAAGAGGACGAT
 
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rJMSF022K23+          GACAATACGAAAAGCTCGATATTGAGCAAAGATATTAAGAACCAAGCTTCTGAGAATGGA
                      ____________________________________________________________
consensus             GACAATACGAAAAGCTCGATATTGAGCAAAGATATTAAGAACCAAGCTTCTGAGAATGGA
 
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rJMSF022K23+          AAGAAGAGGAAACGGCCTTCACAAGTGAAGGAGAATGGTGATTTAGCGAAAGAGGAAAAT
                      ____________________________________________________________
consensus             AAGAAGAGGAAACGGCCTTCACAAGTGAAGGAGAATGGTGATTTAGCGAAAGAGGAAAAT
 
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rJMSF022K23+          GGGCTAGGTAGTAAAACGAGCTCCGATGAGTTGAAACGATCGGTTGGGTTCAGACAGAAC
                      ____________________________________________________________
consensus             GGGCTAGGTAGTAAAACGAGCTCCGATGAGTTGAAACGATCGGTTGGGTTCAGACAGAAC
 
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rJMSF022K23+          GGGAGCCGAAGGAAAAATAAGCCTAGGCGAGCAGCTGAAGTTGGCGTTGAGTGCAGATGA
                      ____________________________________________________________
consensus             GGGAGCCGAAGGAAAAATAAGCCTAGGCGAGCAGCTGAAGTTGGCGTTGAGTGCAGATGA
 
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rJMSF022K23+          TGATCTTTCTGTTGGCTATTGATAGCTCAGTCTATGTTTGTTTATATTTGCTTCTCTATG
                      ____________________________________________________________
consensus             TGATCTTTCTGTTGGCTATTGATAGCTCAGTCTATGTTTGTTTATATTTGCTTCTCTATG
 
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rJMSF022K23+          CTCTTTTGACATATACTTTCAATTTTGGAAACTTCATTTAAAACATTCCGAAACATTTAT
                      ____________________________________________________________
consensus             CTCTTTTGACATATACTTTCAATTTTGGAAACTTCATTTAAAACATTCCGAAACATTTAT