Contig 012610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022G10Sequence661012610 (2)ref|XP_009591006.1|128PREDICTED: uncharacterized protein LOC104088089 [Nicotiana tomentosiformis]755012610 (2)ref|XP_009591006.1|80.5PREDICTED: uncharacterized protein LOC104088089 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF022G10-                                                GAACAACTTTTCCCCGGAGACCT
                      ____________________________________________________________
consensus                                                  GAACAACTTTTCCCCGGAGACCT
 
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JMSF022G10-           CTTCAGCTCATAGTTCCTCAAATCTCTGAAATTGGGTTTCAATTTCTTGCACACAGCTAG
                      ____________________________________________________________
consensus             CTTCAGCTCATAGTTCCTCAAATCTCTGAAATTGGGTTTCAATTTCTTGCACACAGCTAG
 
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JMSF022G10-           CTAATCATCGCGAGTTTGAAGCGCCTGCAAGGAAAAAATTCAAGTTGTGTATCCGAAGGT
                      ____________________________________________________________
consensus             CTAATCATCGCGAGTTTGAAGCGCCTGCAAGGAAAAAATTCAAGTTGTGTATCCGAAGGT
 
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JMSF022G10-           AAAGGTGAGGGATCAGCAGGAAGAGGATGATCAGTATGTTTATGGATTGGGTTCTTTGCA
                      ____________________________________________________________
consensus             AAAGGTGAGGGATCAGCAGGAAGAGGATGATCAGTATGTTTATGGATTGGGTTCTTTGCA
 
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JMSF022G10-           ATCCTTAAAAGCTTTTGATGCCATCTCCATCTCTGACTTGTCTTCTCCAGATGATTCTCC
                      ____________________________________________________________
consensus             ATCCTTAAAAGCTTTTGATGCCATCTCCATCTCTGACTTGTCTTCTCCAGATGATTCTCC
 
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JMSF022G10-           AACATCGGTTGTAAGGATTCCCAGGTCATATATCTCAAATTCACCCAAACCTGCAAGTCC
                      ____________________________________________________________
consensus             AACATCGGTTGTAAGGATTCCCAGGTCATATATCTCAAATTCACCCAAACCTGCAAGTCC
 
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JMSF022G10-           CGTCTCCACAGGAGCAACGAATAACACGAGCCAAAAAACTTCGAGTGAAGGGACAACTAA
rJMSF022G10+                                   ACGAGCCAAAAAACTTCGAGTGAAGGGACAACTAA
                      ____________________________________________________________
consensus             CGTCTCCACAGGAGCAACGAATAACACGAGCCAAAAAACTTCGAGTGAAGGGACAACTAA
 
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JMSF022G10-           ACCCAGATCTAGTTCAGTCCCGAGACCACGAGCAGTCTTGTCTAGTCCAGATAATGATCA
rJMSF022G10+          ACCCAGATCTAGTTCAGTCCCGAGACCACGAGCAGTCTTGTCTAGTCCAGATAATGATCA
                      ____________________________________________________________
consensus             ACCCAGATCTAGTTCAGTCCCGAGACCACGAGCAGTCTTGTCTAGTCCAGATAATGATCA
 
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JMSF022G10-           AAGGATAGGAGTTAGTAACAAGCCGAGAGCTAAATTGCTTCCTGGATTGAAAAGTCAGAA
rJMSF022G10+          AAGGATAGGAGTTAGTAACAAGCCGAGAGCTAAATTGCTTCCTGGATTGAAAAGTCAGAA
                      ____________________________________________________________
consensus             AAGGATAGGAGTTAGTAACAAGCCGAGAGCTAAATTGCTTCCTGGATTGAAAAGTCAGAA
 
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JMSF022G10-           CACGTGCCAAAGTAGACATACACAGTGCAAAATTATTCCCAGAATGGCGAAAGCTGAAAG
rJMSF022G10+          CACGTGCCAAAGTAGACATACACAGTGCAAAATTATTCCCAGAATGGCGAAAGCTGAAAG
                      ____________________________________________________________
consensus             CACGTGCCAAAGTAGACATACACAGTGCAAAATTATTCCCAGAATGGCGAAAGCTGAAAG
 
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JMSF022G10-           CCATTTAAACGCTAAAGAGTTCAAAGATTCAGATCAAAGCAAAATAATTCCTAGAATGAC
rJMSF022G10+          CCATTTAAACGCTAAAGAGTTCAAAGATTCAGATCAAAGCAAAATAATTCCTAGAATGAC
                      ____________________________________________________________
consensus             CCATTTAAACGCTAAAGAGTTCAAAGATTCAGATCAAAGCAAAATAATTCCTAGAATGAC
 
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JMSF022G10-           CAAAGGTGAAAGCCGCCCTATAAACGCTAAAGAGTTCA                      
rJMSF022G10+          CAAAGGTGAAAGCCGCCCTATAAACGCTAAAGAGTTCAAAGATTCAGTTCATGGTGAGAC
                      ____________________________________________________________
consensus             CAAAGGTGAAAGCCGCCCTATAAACGCTAAAGAGTTCAAAGATTCAGTTCATGGTGAGAC
 
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rJMSF022G10+          TGGCCTTCCGGTTAAAGGAAGGTTAGCGAGAACTGAACTGAATCTGAAGACACATATCAG
                      ____________________________________________________________
consensus             TGGCCTTCCGGTTAAAGGAAGGTTAGCGAGAACTGAACTGAATCTGAAGACACATATCAG
 
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rJMSF022G10+          AAAAGGGCCAGCATCTGTTAGAAGCAAAGCACTCGGTAATTCCACAGTGGCAGAGTAAAT
                      ____________________________________________________________
consensus             AAAAGGGCCAGCATCTGTTAGAAGCAAAGCACTCGGTAATTCCACAGTGGCAGAGTAAAT
 
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rJMSF022G10+          TATATTTTTGATTGAACCGCTCTTGCCAGCTGGAGTTCGTTTACACGGATACGATATTCA
                      ____________________________________________________________
consensus             TATATTTTTGATTGAACCGCTCTTGCCAGCTGGAGTTCGTTTACACGGATACGATATTCA
 
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rJMSF022G10+          AACTAATAGATAGATTTGTAGAACTCGGAGCTCATCTCCCTCTTGCATCGAGCATGTTGC
                      ____________________________________________________________
consensus             AACTAATAGATAGATTTGTAGAACTCGGAGCTCATCTCCCTCTTGCATCGAGCATGTTGC
 
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rJMSF022G10+          CAGGATCTTTTTTCTGTAATCTAACCGCTAACGCTTCTACTTGTTTCAGAACAAGTTAAA
                      ____________________________________________________________
consensus             CAGGATCTTTTTTCTGTAATCTAACCGCTAACGCTTCTACTTGTTTCAGAACAAGTTAAA
 
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rJMSF022G10+          CTGTCTGAGTAAGCTAAAGTTAGAGCAGCTTCTTGTTCTTGTTTCTTGGTTTTGTTAGCA
                      ____________________________________________________________
consensus             CTGTCTGAGTAAGCTAAAGTTAGAGCAGCTTCTTGTTCTTGTTTCTTGGTTTTGTTAGCA
 
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rJMSF022G10+          TTTGTTGCATCAACCTCTGTGTTGATCCATTGTAGCTCTGAAGTTTTATATGATGATTGA
                      ____________________________________________________________
consensus             TTTGTTGCATCAACCTCTGTGTTGATCCATTGTAGCTCTGAAGTTTTATATGATGATTGA