Contig 012609:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050C22-                             GAGGCAATCCATAAGAGTATAGTTTCGGCGGGCTAAGTCGTC
                      ____________________________________________________________
consensus                               GAGGCAATCCATAAGAGTATAGTTTCGGCGGGCTAAGTCGTC
 
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JMSF050C22-           CGGTAATTCAGCTGCGAACGATTCAACGGCAATATTTTCCGGCGAGAAGGTTACGTAAGT
                      ____________________________________________________________
consensus             CGGTAATTCAGCTGCGAACGATTCAACGGCAATATTTTCCGGCGAGAAGGTTACGTAAGT
 
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JMSF050C22-           CTTCTGAAGACGTAGAAGAAGATCTGAGGCCTTCAGAATGAGCGCGTCCAGGTTTATCAA
JMSF022F01-                            GAAGATCTGAGGCCTTCAGAATGAGCGCGTCCAGGTTTATCAA
                      ____________________________________________________________
consensus             CTTCTGAAGACGTAGAAGAAGATCTGAGGCCTTCAGAATGAGCGCGTCCAGGTTTATCAA
 
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JMSF050C22-           GTGTGTCACGGTGGGAGATGGTGCTGTTGGCAAGACTTGCCTCTTGATTTCCTACACCAG
JMSF022F01-           GTGTGTCACGGTGGGAGATGGTGCTGTTGGCAAGACTTGCCTCTTGATTTCCTACACCAG
                      ____________________________________________________________
consensus             GTGTGTCACGGTGGGAGATGGTGCTGTTGGCAAGACTTGCCTCTTGATTTCCTACACCAG
 
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JMSF050C22-           CAACACTTTCCCCACGGATTACGTTCCAACTGTATTTGACAATTTCAGTGCCAACGTGGT
JMSF022F01-           CAACACTTTCCCCACGGATTACGTTCCAACTGTATTTGACAATTTCAGTGCCAACGTGGT
                      ____________________________________________________________
consensus             CAACACTTTCCCCACGGATTACGTTCCAACTGTATTTGACAATTTCAGTGCCAACGTGGT
 
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JMSF050C22-           TGTCAATGGGGCTACTGTGAACCTTGGGTTGTGGGATACTGCTGGACAGGAGGATTATAA
JMSF022F01-           TGTCAATGGGGCTACTGTGAACCTTGGGTTGTGGGATACTGCTGGACAGGAGGATTATAA
                      ____________________________________________________________
consensus             TGTCAATGGGGCTACTGTGAACCTTGGGTTGTGGGATACTGCTGGACAGGAGGATTATAA
 
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JMSF050C22-           CAGATTAAGACCACTGAGTTACCGTGGAGCTGATGTGTTCATTTTGGCATTTTCTCTCAT
JMSF022F01-           CAGATTAAGACCACTGAGTTACCGTGGAGCTGATGTGTTCATTTTGGCATTTTCTCTCAT
rJMSF050C22+                                                            TTTCTCTCAT
                      ____________________________________________________________
consensus             CAGATTAAGACCACTGAGTTACCGTGGAGCTGATGTGTTCATTTTGGCATTTTCTCTCAT
 
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JMSF050C22-           TAGTAAGGCCAGCTATGAAAATGTTTCCAAAAAGTGGATCCCTGAGTTGAAACATTATGC
JMSF022F01-           TAGTAAGGCCAGCTATGAAAATGTTTCCAAAAAGTGGATCCCTGAGTTGAAACATTATGC
rJMSF050C22+          TAGTAAGGCCAGCTATGAAAATGTTTCCAAAAAGTGGATCCCTGAGTTGAAACATTATGC
                      ____________________________________________________________
consensus             TAGTAAGGCCAGCTATGAAAATGTTTCCAAAAAGTGGATCCCTGAGTTGAAACATTATGC
 
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JMSF050C22-           TCCTGGTGTCCTAATAGTTCTTGTTGGAACAAAACTTGATCTTCGAGATGATAAGCAGTT
JMSF022F01-           TCCTGGTGTCCCAATAGTTCTTGTTGGAACAAAACTTGATCTTCGAGATGATAAGCAGTT
rJMSF050C22+          TCCTGGTGTCCTAATAGTTCTTGTTGGAACAAAACTTGATCTTCGAGATGATAAGCAGTT
rJMSF022F01+                    CCAATAGTTCTTGTTGGAACAAAACTTGATCTTCGAGATGATAAGCAGTT
                      ____________________________________________________________
consensus             TCCTGGTGTCCTAATAGTTCTTGTTGGAACAAAACTTGATCTTCGAGATGATAAGCAGTT
 
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JMSF050C22-           CTTTGTAGACCATCCTGGTGCTGTGCCAATAACTACTGCTCAGGGGGAGGAACTGAGGAA
JMSF022F01-           CTTTGTAGACCATCCTGGTGCTGTGCCAATAACTACTGCTCAGGGGGAGGAACTGAGGAA
rJMSF050C22+          CTTTGTAGACCATCCTGGTGCTGTGCCAATAACTACTGCTCAGGGGGAGGAACTGAGGAA
rJMSF022F01+          CTTTGTAGACCATCCTGGTGCTGTGCCAATAACTACTGCTCAGGGGGAGGAACTGAGGAA
                      ____________________________________________________________
consensus             CTTTGTAGACCATCCTGGTGCTGTGCCAATAACTACTGCTCAGGGGGAGGAACTGAGGAA
 
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JMSF050C22-           ATTGATTGATGCGCCTGCCTACATTGAATGTAGTTCAAAGTCACAGCAGAATGTGAAATC
JMSF022F01-           ATTGATTGATGCGCCTGCCTACATTGAATGTAGTTCAAAGTCACAGCAGAATGTGAAATC
rJMSF050C22+          ATTGATTGATGCGCCTGCCTACATTGAATGTAGTTCAAAGTCACAGCAGAATGTGAAATC
rJMSF022F01+          ATTGATTGATGCGCCTGCCTACATTGAATGTAGTTCAAAGTCACAGCAGAATGTGAAATC
                      ____________________________________________________________
consensus             ATTGATTGATGCGCCTGCCTACATTGAATGTAGTTCAAAGTCACAGCAGAATGTGAAATC
 
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JMSF050C22-           TGTGTTTGATGCTGCCATTAAAGTTGTGCTGGCGC                         
JMSF022F01-           TGTGTTTGATGCTGCCATTAAAGTTGTGCTGGCGCCACCCAAGGCGAA            
rJMSF050C22+          TGTGTTTGATGCTGCCATTAAAGTTGTGCTGGCGCCACCCAAGGCGAAGAAAAAGAAGGG
rJMSF022F01+          TGTGTTTGATGCTGCCATTAAAGTTGTGCTGGCGCCACCCAAGGCGAAGAAAAAGAAGGG
                      ____________________________________________________________
consensus             TGTGTTTGATGCTGCCATTAAAGTTGTGCTGGCGCCACCCAAGGCGAAGAAAAAGAAGGG
 
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rJMSF050C22+          AAAAACTCAGAAGGCGTGCTCCATTTTGTGAATGACATAAATAGTTCCATTTCAGGGATT
rJMSF022F01+          AAAAACTCAGAAGGCGTGCTCCATTTTGTGAATGACATAAATAGTTCCATTTCAGGGATT
                      ____________________________________________________________
consensus             AAAAACTCAGAAGGCGTGCTCCATTTTGTGAATGACATAAATAGTTCCATTTCAGGGATT
 
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rJMSF050C22+          CCACTTACTACTGCCATTCTCTTTGTATCCCTCCTTCATTTCCATTTCTCTTTCCTTTTG
rJMSF022F01+          CCACTTACTACTGCCATTCTCTTTGTATCCCTCCTTCATTTCCATTTCTCTTTCCTTTTG
                      ____________________________________________________________
consensus             CCACTTACTACTGCCATTCTCTTTGTATCCCTCCTTCATTTCCATTTCTCTTTCCTTTTG
 
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rJMSF050C22+          TTTCATCGAGGATGGATCGGAGGTCCTCTCACCGCATGTCAGATGACGCTACTAATGATC
rJMSF022F01+          TTTCATCGAGGATGGATCGGAGGTCCTCTCACCGCATGTCAGATGACGCTACTAATGATC
                      ____________________________________________________________
consensus             TTTCATCGAGGATGGATCGGAGGTCCTCTCACCGCATGTCAGATGACGCTACTAATGATC
 
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rJMSF050C22+          CTAAGTGTCAAGGGTGGCTGCTGAGTGCTGCTGGCTGGCTGGCTAGGTTTATCCATGTTG
rJMSF022F01+          CTAAGTGTCAAGGGTGGCTGCTGAGTGCTGCTGGCTGGCTGGCTAGGTTTATCCATGTTG
                      ____________________________________________________________
consensus             CTAAGTGTCAAGGGTGGCTGCTGAGTGCTGCTGGCTGGCTGGCTAGGTTTATCCATGTTG
 
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rJMSF050C22+          CCTCTTGTAGGCCACTCAATTGTGCCCTCTCCATTTTGATTTGCTTTATGATTCAATGAC
rJMSF022F01+          CCTCTTGTAGGCCACTCAATTGTGCCCTCTCCATTTTGATTTGCTTTATGATTCAATGAC
                      ____________________________________________________________
consensus             CCTCTTGTAGGCCACTCAATTGTGCCCTCTCCATTTTGATTTGCTTTATGATTCAATGAC
 
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rJMSF050C22+          ACAAAACATTTAGGGAAACAAAACAAATATGCCCGCAGCGATGTTGCCTTTTATATTTGT
rJMSF022F01+          ACAAAACATTTAGGGAAACAAAACAAATATGCCCGCAGCGATGTTGCCTTTTATATTTGT
                      ____________________________________________________________
consensus             ACAAAACATTTAGGGAAACAAAACAAATATGCCCGCAGCGATGTTGCCTTTTATATTTGT
 
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rJMSF050C22+          TGCTTTCTATTCTAAATTTGTCAAGTTCATTTTATAGTCAATTTGTAGGTGGT       
rJMSF022F01+          TGCTTTCTATTCTAAATTTGTCAAGTTCATTTTATAGTCAATTTGTAGGTGGTTGCTATC
                      ____________________________________________________________
consensus             TGCTTTCTATTCTAAATTTGTCAAGTTCATTTTATAGTCAATTTGTAGGTGGTTGCTATC