Contig 012607:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050K14-                    GACTCTATCCTCATGTCAACAACATGGATGGGTTTTTTGTTGCAAAGTTGA
rJMFF040P04+                                                                    GA
                      ____________________________________________________________
consensus                      GACTCTATCCTCATGTCAACAACATGGATGGGTTTTTTGTTGCAAAGTTGA
 
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JMSF050K14-           AGAAAATGAGTAATTCCAAGCGAACTCAGACA-CCCGGTGAAGCATCAGAAGAAACAGAA
rJMFF040P04+          AGAAAATGAGTAATTCCAAGCGAACTCAGACACCCCGGTGAAGCATCAGAAGAAACAGAA
                      ____________________________________________________________
consensus             AGAAAATGAGTAATTCCAAGCGAACTCAGACACCCCGGTGAAGCATCAGAAGAAACAGAA
 
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JMSF050K14-           GGTAATGAGTTGATTGACAACACCAAGCAGAATGCCAAAGGGGACACTGAGAAACAACAC
rJMFF040P04+          GGTAATGAGTTGATTGACAACACCAAGCAGAATGCCAAAGGGGACACTGAGAAACAACAC
                      ____________________________________________________________
consensus             GGTAATGAGTTGATTGACAACACCAAGCAGAATGCCAAAGGGGACACTGAGAAACAACAC
 
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JMSF050K14-           TTGGATAAAGAGGGTGATGGAAAAATGAAGTATAGTTCCACTGAAGATGTAAAAGTAAAA
rJMFF040P04+          TTGGATAAAGAGGGTGATGGAAAAATGAAGTATAGTTCCACTGAAGATGTAAAAGTAAAA
rJMSF022A20+          TTGGATAAAGAGGGTGATGGAAAAATGAAGTATAGTTCCACCGCAGAAGTAAAAGTAAAA
                      ____________________________________________________________
consensus             TTGGATAAAGAGGGTGATGGAAAAATGAAGTATAGTTCCACTGAAGATGTAAAAGTAAAA
 
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JMSF050K14-           GGCCAAAACACTACGAAAAAGAGGAAGAGACATGATCAGAAACATTCACCAAAAAACTTT
rJMFF040P04+          GGCCAAAACACTACGAAAAAGAGGAAGAGACATGATCAGAAACATTCACCAAAAAACTTT
rJMSF022A20+          GGCCAAAACACTACGAAAAAGAGGAAGAGACATGATCAGAAACATTCACCGAAAAACTTT
                      ____________________________________________________________
consensus             GGCCAAAACACTACGAAAAAGAGGAAGAGACATGATCAGAAACATTCACCAAAAAACTTT
 
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JMSF050K14-           GATGGAAAAGAAAATGGAAAGTTAAAAGCCAGTTCAACTGTTAACAGGAAAGAAGAAAAT
rJMFF040P04+          GATGGAAAAGAAAATGGAAAGTTAAAAGCCAGTTCAACTGTTAACAGGAAAGAAGAAAAT
rJMSF022A20+          GATGGAAAAGAAAATGGAAAATTAAAAGCCACTTCAACTCTTAACAGGAAAGAAGAAAAT
                      ____________________________________________________________
consensus             GATGGAAAAGAAAATGGAAAGTTAAAAGCCAGTTCAACTGTTAACAGGAAAGAAGAAAAT
 
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JMSF050K14-           CAAATGGGTAAAAAAACGAGGAGGGAAAGGGTGAAGCCTCCATCTAGAGAGGAAATTACA
rJMFF040P04+          CAAATGGGTAAAAAAACGAGGAGGGAAAGGGTGAAGCCTCCATCTAGAGAGGAAATTACA
rJMSF022A20+          CAAATGGCTAAAAA-----------AAAGGAGGAAGCCTCCATCGAGAGAGGAAATTACG
                      ____________________________________________________________
consensus             CAAATGGGTAAAAAAACGAGGAGGGAAAGGGTGAAGCCTCCATCTAGAGAGGAAATTACA
 
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JMSF050K14-           AAATCCAGGGAAGAGAAAAGGCAAGCTCAGAGAGAGGCAAAGAGAAAAGCCACCACAGAA
rJMFF040P04+          AAATCCAGGGAAGAGAAAAGGCAAGCTCAGAGAGAGGCAAAGAGAAAAGCCACCACAGAA
rJMSF022A20+          AAATCGAGGGAAGAGAAGAGGCAAGCTCAGAGAGAGGCAAAGAGAAAAGCCGCCACAGAA
                      ____________________________________________________________
consensus             AAATCCAGGGAAGAGAAAAGGCAAGCTCAGAGAGAGGCAAAGAGAAAAGCCACCACAGAA
 
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JMSF050K14-           AGGAAAGCTAAAAACAGCAAAGGAAGCAAAGCCTGAAATGACTCAATAGCAACACAGTGA
rJMFF040P04+          AGGAAAGCTAAAAACAGCAAAGGAAGCAAAGCCTGAAATGACTCAATAGCAACACAGTGA
rJMSF022A20+          AGGAAAGCTAAAAACAGCAAAGGAAGCAAAGCTTGAAATGATTTGATAGCAACAC--TGA
                      ____________________________________________________________
consensus             AGGAAAGCTAAAAACAGCAAAGGAAGCAAAGCCTGAAATGACTCAATAGCAACACAGTGA
 
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JMSF050K14-           GTCTAACGCGAGGTAGGATAACCAAAGTCTGGTTGGTAGGATGTTGTGGATTAAT     
rJMFF040P04+          GTCTAACGCGAGGTAGGATAACCAAAGTCTGGTTGGTAGGATGTTGTGGATTAAT     
rJMSF022A20+          GTCTGACGCGAGGAAGGATAA-CAAAGTCTAGTTGGTAGGATGTTGTGGATTAATCGTGT
                      ____________________________________________________________
consensus             GTCTAACGCGAGGTAGGATAACCAAAGTCTGGTTGGTAGGATGTTGTGGATTAATCGTGT
 
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rJMSF022A20+          ATTCAAAAGCATTATTTGTTATCTTTTAGCCAACATGGGGCAAGTTGGGGATTGGGGAAC
                      ____________________________________________________________
consensus             ATTCAAAAGCATTATTTGTTATCTTTTAGCCAACATGGGGCAAGTTGGGGATTGGGGAAC
 
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rJMSF022A20+          TACTTTCTTAGAAGATTCCCCGGTTGATTTGGTTTGGTATCTCTTCTGCTGGCAGACGCG
                      ____________________________________________________________
consensus             TACTTTCTTAGAAGATTCCCCGGTTGATTTGGTTTGGTATCTCTTCTGCTGGCAGACGCG
 
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rJMSF022A20+          GCTACTCGGTAACCCGAGGATTTGCCTCTCGTTCTTCACCCAAAAAAAAGAAGCATTATT
                      ____________________________________________________________
consensus             GCTACTCGGTAACCCGAGGATTTGCCTCTCGTTCTTCACCCAAAAAAAAGAAGCATTATT
 
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rJMSF022A20+          TGTTAGATGTGCTACTGGCTGCCGGTAATAGGTTAGTTTTAAGTTATTTAAAATTCCAAA
                      ____________________________________________________________
consensus             TGTTAGATGTGCTACTGGCTGCCGGTAATAGGTTAGTTTTAAGTTATTTAAAATTCCAAA
 
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rJMSF022A20+          TTCTGTTGGTGGCCAATGCAATTGAGAAGCGCAAGTTATTTTGTGGACCCGGGTGGACTC
                      ____________________________________________________________
consensus             TTCTGTTGGTGGCCAATGCAATTGAGAAGCGCAAGTTATTTTGTGGACCCGGGTGGACTC
 
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rJMSF022A20+          GGATTTAAATATTCACAATTTATCTTTTAAAAATTTATAATTTGTATACTAGGAACACAC
                      ____________________________________________________________
consensus             GGATTTAAATATTCACAATTTATCTTTTAAAAATTTATAATTTGTATACTAGGAACACAC