Contig 012600:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003H14+                                                            CTCGTGATGC
rJMSF020P19+                                                          CACTCGTGATGC
                      ____________________________________________________________
consensus                                                             CACTCGTGATGC
 
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rJMSF003H14+          TTCGATCTACATTGTAAGCTGGAACGACCACTTCTTTGTGCTGAAAGTCGAGCAAGATGC
rJMSF020P19+          TTCGATCTACATTGTAAGCTGGAACGACCACTTCTTTGTGCTGAAAGTCGAGCAAGATGC
                      ____________________________________________________________
consensus             TTCGATCTACATTGTAAGCTGGAACGACCACTTCTTTGTGCTGAAAGTCGAGCAAGATGC
 
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rJMSF003H14+          ATACTACATCATCGACACATTGGGCGAGAGGCTATACGAGGGCTGCAACCAAGCCTTTAT
rJMSF020P19+          ATACTACATCATCGACACATTGGGCGAGAGGCTCTACGAGGGCTGCAACCAAGCCTTTAT
                      ____________________________________________________________
consensus             ATACTACATCATCGACACATTGGGCGAGAGGCTCTACGAGGGCTGCAACCAAGCCTTTAT
 
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rJMSF003H14+          CCTCAGGTTCGACAGAGACACTACAATTTCACTGGTGGCTAACGAGACTCAACCCCCGAC
rJMSF020P19+          CCTCAGGTTCGACAGAGACACTACAATTTCACTGGTGGCTAACGAGACTCAACCCCCGAC
                      ____________________________________________________________
consensus             CCTCAGGTTCGACAGAGACACTACAATTTCACTGGTGGCTAACGAGACTCAACCCCCGAC
 
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rJMSF003H14+          AGAAGACTCATCTGCTAGTGCTAAAACTGAGGATAATATCGTCAACGCCCCCAAGACAAA
rJMSF020P19+          AGAAGACTCATCTGCTAGTGCTAAAACTGAGGATAATATCGTCAACGCCCCCAAGACAAA
                      ____________________________________________________________
consensus             AGAAGACTCATCTGCTAGTGCTAAAACTGAGGATAATATCGTCAACGCCCCCAAGACAAA
 
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rJMSF003H14+          CAACGAAGAATCGACTATGGGGGGCGAGCCTGACAATAACGAGCAAGAATCAATGGTATG
rJMSF020P19+          CAACGAAGAATCGACTATGGGGGGCGAGCCTGACAATAACGAGCAAGAATCAATGGTATG
                      ____________________________________________________________
consensus             CAACGAAGAATCGACTATGGGGGGCGAGCCTGACAATAACGAGCAAGAATCAATGGTATG
 
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rJMSF003H14+          CAGAGGCAAAGACTCGTGCAAAGAGTACATTAAAAGTTTCTTGGCAGCAATCCCTATTCG
rJMSF020P19+          CAGAGGCAAAGACTCGTGCAAAGAGTACATTAAAAGTTTCTTGGCAGCAATCCCTATTCG
                      ____________________________________________________________
consensus             CAGAGGCAAAGACTCGTGCAAAGAGTACATTAAAAGTTTCTTGGCAGCAATCCCTATTCG
 
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rJMSF003H14+          AGANNTACAAGTTGATCTTAAGAAGGGTTTGAGGCCATNGATGCCCCTTCATCAGCGGCT
rJMSF020P19+          AGAATTACAAGTTGATCTTAAGAAGGGTTTGAGGCCATCGATGCCCCTTCATCAGCGGCT
                      ____________________________________________________________
consensus             AGAATTACAAGTTGATCTTAAGAAGGGTTTGAGGCCATCGATGCCCCTTCATCAGCGGCT
 
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rJMSF003H14+          TCAAATCGAATTCCATTATACGAATTACAAACTACTTTCACTCTGCGATGGAGGAGTAGA
rJMSF020P19+          TCAAATCGAATTCCATTATACGAATTACAAACTACTTTCACTCTGTGATGGAGGAGTAGA
                      ____________________________________________________________
consensus             TCAAATCGAATTCCATTATACGAATTACAAACTACTTTCACTCTGTGATGGAGGAGTAGA
 
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rJMSF003H14+          ACCAAGTTCTGATNTCTAGGGAACANTATTGCAGAATTAGGANTAGTACATGAGNGTATA
rJMSF020P19+          ACCAAGTTCTGATCTCTAGGGAACATTATTGCAGAATTAGGATTAGTACATGAGAGTATA
                      ____________________________________________________________
consensus             ACCAAGTTCTGATCTCTAGGGAACATTATTGCAGAATTAGGATTAGTACATGAGAGTATA
 
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rJMSF003H14+          TGAGTACATTACTAACCCCCTATCCCCT                                
rJMSF020P19+          TGAGTACATTACTAACCCCCTATCCCCTTTTTCATTCTATTTTTAGTGTTTTTACATATA
                      ____________________________________________________________
consensus             TGAGTACATTACTAACCCCCTATCCCCTTTTTCATTCTATTTTTAGTGTTTTTACATATA
 
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rJMSF020P19+          TGATCTTAGACTGGATAAGCCCACTTGTGAGATATAACCTTTTTCTCTAAAGGGCATCTC
                      ____________________________________________________________
consensus             TGATCTTAGACTGGATAAGCCCACTTGTGAGATATAACCTTTTTCTCTAAAGGGCATCTC
 
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rJMSF020P19+          TTTCTTTCTCCATAGAACATACATAAGAAGCTTCCTTGTTTGGTTGACAATTTTTCCTGT
                      ____________________________________________________________
consensus             TTTCTTTCTCCATAGAACATACATAAGAAGCTTCCTTGTTTGGTTGACAATTTTTCCTGT