Contig 012598:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G22Sequence297012598 (3)732012598 (3)
JMSF020M13Sequence675022102821012598 (3)

Alignment

This contig is upended


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JMSF007G22-               GGGACGCTCAGAAGACTTCTCCCTCTCCGGCCTCCGCCGGTCCCATCGCTCTCAGA
                      ____________________________________________________________
consensus                 GGGACGCTCAGAAGACTTCTCCCTCTCCGGCCTCCGCCGGTCCCATCGCTCTCAGA
 
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JMSF007G22-           CCACCACCGACCATCGTCTATCGCTCACCGCCCACCGTCCACCGTATTTAGTTTCCTCCC
                      ____________________________________________________________
consensus             CCACCACCGACCATCGTCTATCGCTCACCGCCCACCGTCCACCGTATTTAGTTTCCTCCC
 
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JMSF007G22-           ACCGCCCACCACATCCGACAGTATCGGTCTCCGTACTCGGTGGTTCTTCCTCCTCCCTTC
rJMSF007G22+                                                                   TTC
                      ____________________________________________________________
consensus             ACCGCCCACCACATCCGACAGTATCGGTCTCCGTACTCGGTGGTTCTTCCTCCTCCCTTC
 
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JMSF007G22-           GAACCGGGTGCGGAATTCCTCCCTCCGGTGGTTCTGCCTTCTCGCTATTCCGGTCTCCAT
rJMSF007G22+          GAACCGGGTGCGGAATTCCTCCCTCCGGTGGTTCTGCCTTCTCGCTATTCCGGTCTCCAT
                      ____________________________________________________________
consensus             GAACCGGGTGCGGAATTCCTCCCTCCGGTGGTTCTGCCTTCTCGCTATTCCGGTCTCCAT
 
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JMSF007G22-           ACCCGGCTTCTCCGGCAGAAGGCAGTAGCGACTCCAGTTCTCCTATCTCCGTTGCTCTAG
rJMSF007G22+          ACCCGGCTTCTCCGGCAGAAGGCAGTAGCGACTCCAGTTCTCCTATCTCCGTTGCTCTAG
                      ____________________________________________________________
consensus             ACCCGGCTTCTCCGGCAGAAGGCAGTAGCGACTCCAGTTCTCCTATCTCCGTTGCTCTAG
 
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JMSF007G22-           C                                                           
rJMSF007G22+          CAATTGGAGCAAGCCATTGAATATTTGAAACAGCTTCAACTGTATTGCGAGCTTGACAAA
                      ____________________________________________________________
consensus             CAATTGGAGCAAGCCATTGAATATTTGAAACAGCTTCAACTGTATTGCGAGCTTGACAAA
 
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rJMSF007G22+          TTTGAACTCACAAGGTCTTCAAGTTCTTCTTGCGTTGCTAAGGTTTGTTTTGAACTTACA
                      ____________________________________________________________
consensus             TTTGAACTCACAAGGTCTTCAAGTTCTTCTTGCGTTGCTAAGGTTTGTTTTGAACTTACA
 
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rJMSF007G22+          AAATTTTCATTTGTTGTTTATTTGCCGGCTAAACCGCCTGTGGGTACTGGCCCTTGTGTT
                      ____________________________________________________________
consensus             AAATTTTCATTTGTTGTTTATTTGCCGGCTAAACCGCCTGTGGGTACTGGCCCTTGTGTT
 
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rJMSF007G22+          TTATTTGGCTAAATCATTTGTGGGTACCGGAGGTTTATGAAAATATGCATGATTGTTTAC
                      ____________________________________________________________
consensus             TTATTTGGCTAAATCATTTGTGGGTACCGGAGGTTTATGAAAATATGCATGATTGTTTAC
 
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rJMSF007G22+          AAGCTGAAAGAATTGTGATGGAAGCTAAACTGCAAGCTGAAAGAATTGAGATGGACGCAA
                      ____________________________________________________________
consensus             AAGCTGAAAGAATTGTGATGGAAGCTAAACTGCAAGCTGAAAGAATTGAGATGGACGCAA
 
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rJMSF007G22+          TTGTGATAGAAGCTAAACTGCAAGCTGAAAGAATTGAGATGGACGCTAAACTACAAGCTG
                      ____________________________________________________________
consensus             TTGTGATAGAAGCTAAACTGCAAGCTGAAAGAATTGAGATGGACGCTAAACTACAAGCTG
 
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rJMSF007G22+          AAAGAATTGAGATGGACGCTAAACTACAAGCTGAAAGAACTCCAATTCAGGCTCAAATGC
rJMSF020M13+                                                      ATTCAGGCTCAAATGC
                      ____________________________________________________________
consensus             AAAGAATTGAGATGGACGCTAAACTACAAGCTGAAAGAACTCCAATTCAGGCTCAAATGC
 
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rJMSF007G22+          AAGCTCAAATTGCAAGTTTGATGGATGAGTTGCGTCGCAACGGCATGCTATCCATTCCAA
rJMSF020M13+          AAGTTCAGATTGCAAGTTTGATGGATGAGTTGCGTCGCAACGACATGCTATTCACTTCAA
                      ____________________________________________________________
consensus             AAGTTCAGATTGCAAGTTTGATGGATGAGTTGCGTCGCAACGGCATGCTATTCATTTCAA
 
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rJMSF007G22+          GTACTCAAGCTCAACATTCGGCCAATTCAAATGATGAAAACTTAGGAGATGATTAGATTA
rJMSF020M13+          GTACTCTAGCTGAACATTTAGCTAATTCAAATGATGAAAACTTAGAAGATGATTAGATTA
                      ____________________________________________________________
consensus             GTACTCTAGCTGAACATTTGGCTAATTCAAATGATGAAAACTTAGGAGATGATTAGATTA
 
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rJMSF007G22+          TGTTTATTAA                                                  
rJMSF020M13+          TGTTTATTAAACAGTTAGAGACTATGCGAGTTGAGATGGAGGCTCAGATGAAAGCTAAAC
                      ____________________________________________________________
consensus             TGTTTATTAAACAGTTAGAGACTATGCGAGTTGAGATGGAGGCTCAGATGAAAGCTAAAC
 
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rJMSF020M13+          TACAAGTTGAAAGAACTCAAATGCAGGCTCAAATGCAAGCTCAGAAGTTCAGATTGCAAG
                      ____________________________________________________________
consensus             TACAAGTTGAAAGAACTCAAATGCAGGCTCAAATGCAAGCTCAGAAGTTCAGATTGCAAG
 
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rJMSF020M13+          TTTGATGGATGAGTAAAAAAACAGCGTATTTATGGCTTTGGGACTAAGTCATCCGCATTT
                      ____________________________________________________________
consensus             TTTGATGGATGAGTAAAAAAACAGCGTATTTATGGCTTTGGGACTAAGTCATCCGCATTT
 
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rJMSF020M13+          ATCAGCAGCGGGGATAGTTGTAGTTCATCTGCTACTTCACAACTTCATCTGCTACTTCAC
                      ____________________________________________________________
consensus             ATCAGCAGCGGGGATAGTTGTAGTTCATCTGCTACTTCACAACTTCATCTGCTACTTCAC
 
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rJMSF020M13+          AACTTCAACAAGAGGGAATGAAGGAGATGGTGAACAAACAGTTAGAGACTATGCGAGTTG
                      ____________________________________________________________
consensus             AACTTCAACAAGAGGGAATGAAGGAGATGGTGAACAAACAGTTAGAGACTATGCGAGTTG
 
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rJMSF020M13+          AGATGGAGGCTCAGATGGAAGTTAAACTACAAGTTAAAAGAACTCAAATGCAGGCTTAAA
                      ____________________________________________________________
consensus             AGATGGAGGCTCAGATGGAAGTTAAACTACAAGTTAAAAGAACTCAAATGCAGGCTTAAA
 
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rJMSF020M13+          TGCAGACTCAAATGCAAGTTTGATGGATGAGTTGTGTTGCAACAACATGCTATCCACTTC
                      ____________________________________________________________
consensus             TGCAGACTCAAATGCAAGTTTGATGGATGAGTTGTGTTGCAACAACATGCTATCCACTTC
 
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rJMSF020M13+          AAGTACTCAAGCTGAACATTCAGCTAATTCAAATGATGAAAATTTAAGAGATGATTAGAT
                      ____________________________________________________________
consensus             AAGTACTCAAGCTGAACATTCAGCTAATTCAAATGATGAAAATTTAAGAGATGATTAGAT
 
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rJMSF020M13+          TATGTTTATTTATATGTGGTACTGGTTCTAATGATGTAACATTATACCTACCTATACTTT
                      ____________________________________________________________
consensus             TATGTTTATTTATATGTGGTACTGGTTCTAATGATGTAACATTATACCTACCTATACTTT