Contig 012597:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020L20-                                              GAGACTAGCCACACGGCGGCTCAAG
                      ____________________________________________________________
consensus                                                GAGACTAGCCACACGGCGGCTCAAG
 
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JMSF020L20-           TTCTTTCTTTCCACACCACCCCCGGCAACCCACTTCCTCTCTATTTATATATATACATCT
                      ____________________________________________________________
consensus             TTCTTTCTTTCCACACCACCCCCGGCAACCCACTTCCTCTCTATTTATATATATACATCT
 
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JMSF020L20-           GTTTCCTGAAGAAACAAAGAATGGGACGCGAAATGGCAATCTCATTGGACGGAGTTAGGG
                      ____________________________________________________________
consensus             GTTTCCTGAAGAAACAAAGAATGGGACGCGAAATGGCAATCTCATTGGACGGAGTTAGGG
 
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JMSF020L20-           ACAAGAACTTGATGCAGCTGAAGAAGCTCAACACCGCTCTCTTCCCTGTCCGTTACAACG
                      ____________________________________________________________
consensus             ACAAGAACTTGATGCAGCTGAAGAAGCTCAACACCGCTCTCTTCCCTGTCCGTTACAACG
 
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JMSF020L20-           ATAAGTACTACGCAGATGCTCTTTCTTCCGGCGAATTTACCAAGCTAGCATACTATAGTG
rJMSF020L20+                                         CGAATTTACCAAGCTAGCATACTATAGNG
                      ____________________________________________________________
consensus             ATAAGTACTACGCAGATGCTCTTTCTTCCGGCGAATTTACCAAGCTAGCATACTATAGTG
 
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JMSF020L20-           ACATTTGTGTTGGTGCAATCGCATGTCGGCTTGAGAAGAAGGAAGGTGGGGCTGTTCGCG
rJMSF020L20+          ACATTTGNGTTGGTGCNATCGCANGTNGGCTTGAGAAGAAGGAAGGTGGGGCTGTTCGCG
                      ____________________________________________________________
consensus             ACATTTGTGTTGGTGCAATCGCATGTCGGCTTGAGAAGAAGGAAGGTGGGGCTGTTCGCG
 
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JMSF020L20-           TATACATCATGACCTTGGGTGTTTTGGCACCTTATCGTGGATTAGGTGTTGGTTCAAAGC
rJMSF020L20+          TATACATCNTGNCCTTGGGNGTTTTGGCNCCTTATCGTGGNTTAGGNGTTGGTTCAAAGC
                      ____________________________________________________________
consensus             TATACATCATGACCTTGGGTGTTTTGGCACCTTATCGTGGATTAGGTGTTGGTTCAAAGC
 
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JMSF020L20-           TGTTAAATCATGTGCTTGATCTCTGTGCTAAGCAAAACATCAGTGAGATTTACTTGCATG
rJMSF020L20+          TGTTAAATCATGNGCTTGATCTCTGTGNTAAGCAAAACNTCNGTGAGATTTACTTGCATG
                      ____________________________________________________________
consensus             TGTTAAATCATGTGCTTGATCTCTGTGCTAAGCAAAACATCAGTGAGATTTACTTGCATG
 
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JMSF020L20-           TCCAGACAAATAACGAGGATGCCATCAAATTCTACAAGAAATTTGGGTTTGAGATTACAG
rJMSF020L20+          TCCNGACAAATAACGNGGNTGCCNTCAAATTTTACNAGAAATTTGGGTTTGNGATTACNG
                      ____________________________________________________________
consensus             TCCAGACAAATAACGAGGATGCCATCAAATTTTACAAGAAATTTGGGTTTGAGATTACAG
 
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JMSF020L20-           AGACCATCCAAAACTATTACACGAACATCACTCCACCAGACTGCTATGTCGTAACCAAAT
rJMSF020L20+          NGNCCNTCCAAAACTNTTACNCGAACATCNCTCCNCCNGNCTGNTATGTNGTAACCAAAT
                      ____________________________________________________________
consensus             AGACCATCCAAAACTATTACACGAACATCACTCCACCAGACTGCTATGTCGTAACCAAAT
 
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JMSF020L20-           TCATCACTCCATTCCAGGCGAAGAAATAACTCGTTCAGTTAGACTCCAAATCGTGATGGT
rJMSF020L20+          TCATCNCTCCNTTCCNGGNGAAGAAATAACTCGTTCAGTTAGACTCCAAATCGTGATGGT
                      ____________________________________________________________
consensus             TCATCACTCCATTCCAGGCGAAGAAATAACTCGTTCAGTTAGACTCCAAATCGTGATGGT
 
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JMSF020L20-           CAAGCTTCAGTTTTTGCAGTGCCCGTGTTTCTGAAACTTGTTATTACTATTATTGGCAGT
rJMSF020L20+          CNAGCTTCNGTTTTTGCNGNGCCCGNGTTTNTGAAACTTGTTATTACTATTATTGGCNGN
                      ____________________________________________________________
consensus             CAAGCTTCAGTTTTTGCAGTGCCCGTGTTTCTGAAACTTGTTATTACTATTATTGGCAGT
 
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JMSF020L20-           GTGCTTTTCATGAATCC                                           
rJMSF020L20+          GNGCTTTTCNTGAATCCCNTGGGAATGCCCTTGATTGTTTTTTTTTTTGAACTCTTGAGT
                      ____________________________________________________________
consensus             GTGCTTTTCATGAATCCCNTGGGAATGCCCTTGATTGTTTTTTTTTTTGAACTCTTGAGT
 
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rJMSF020L20+          GCAAGAAAATGATAGTCTAAAGAGTTATTAAGGTACTACTGTAAGAGAAACACAATTTGT
                      ____________________________________________________________
consensus             GCAAGAAAATGATAGTCTAAAGAGTTATTAAGGTACTACTGTAAGAGAAACACAATTTGT