Contig 012590:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019I06Sequence636009286 (4)ref|XP_011077851.1|214PREDICTED: uncharacterized protein LOC105161749 [Sesamum indicum]750012590 (2)ref|XP_011004215.1|345PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF034P03Sequence668009286 (4)ref|XP_011077851.1|214PREDICTED: uncharacterized protein LOC105161749 [Sesamum indicum]692012590 (2)ref|XP_011004215.1|345PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]

Alignment

This contig is upended


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rJMSF034P03+                                        GTCGCAGGTGGTGCGGCTGACGTTGGGCAA
rJMSF019I06+                                        GTCGCAGGTGGTGCGGCTGACGTTGGGCAA
                      ____________________________________________________________
consensus                                           GTCGCAGGTGGTGCGGCTGACGTTGGGCAA
 
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rJMSF034P03+          ACACGACACTCGCCGGATTCTGGATGGGTGCGAAGCCAGAGGTATAAAATTGTTTGGGGT
rJMSF019I06+          ACACGACACTCGCCGGATTCTGGATGGGTGCGAAGCCAGAGGTATAAAATTGTTTGGGGT
                      ____________________________________________________________
consensus             ACACGACACTCGCCGGATTCTGGATGGGTGCGAAGCCAGAGGTATAAAATTGTTTGGGGT
 
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rJMSF034P03+          TTTGAGTGCGGCTGGGTTGATTGCAGCCCGGGCTTCTAAAGAGCTTCCAGATCATAAATA
rJMSF019I06+          TTTGAGTGCGGCTGGGTTGATTGCAGCCCGGGCTTCTAAAGAGCTTCCAGATCATAAATA
                      ____________________________________________________________
consensus             TTTGAGTGCGGCTGGGTTGATTGCAGCCCGGGCTTCTAAAGAGCTTCCAGATCATAAATA
 
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rJMSF034P03+          CGAAAAGTATGCAGTTGTCACCCTCATGGACTGCCGTTCAATTCTTGATCCCGTGCTTAG
rJMSF019I06+          CGAAAAGTATGCAGTTGTCACCCTCATGGACTGCCGTTCAATTCTTGATCCCGTGCTTAG
                      ____________________________________________________________
consensus             CGAAAAGTATGCAGTTGTCACCCTCATGGACTGCCGTTCAATTCTTGATCCCGTGCTTAG
 
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rJMSF034P03+          CACCAACCATGCTGGGTTTTATCATTCTGCTATCCTCAACACACATGACATCAAGGGAGG
rJMSF019I06+          CACCAACCATGCTGGGTTTTATCATTCTGCTATCCTCAACACACATGACATCAAGGGAGG
                      ____________________________________________________________
consensus             CACCAACCATGCTGGGTTTTATCATTCTGCTATCCTCAACACACATGACATCAAGGGAGG
 
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rJMSF034P03+          AGAAGACATATGGGAAGTGGCAAAAAGAAGCTACACATCCGTTGCAAATGCCAAGAACAA
rJMSF019I06+          AGAAGACATATGGGAAGTGGCAAAAAGAAGCTACACATCCGTTGCAAATGCCAAGAACAA
                      ____________________________________________________________
consensus             AGAAGACATATGGGAAGTGGCAAAAAGAAGCTACACATCCGTTGCAAATGCCAAGAACAA
 
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rJMSF034P03+          TAACAAGCATTTCAGTGACATGGGTGATATGAACTTCCTGATGGGCAAGGCCATAGAAAA
rJMSF019I06+          TAACAAGCATTTCAGTGACATGGGTGATATGAACTTCCTGATGGGCAAGGCCATAGAAAA
                      ____________________________________________________________
consensus             TAACAAGCATTTCAGTGACATGGGTGATATGAACTTCCTGATGGGCAAGGCCATAGAAAA
 
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rJMSF034P03+          CCCAGGCTTAACCCCTTATTCATCCATGAGGACTGCTTTTCTCTCTGTGTTTGAAGACCC
rJMSF019I06+          CCCAGGCTTAACCCCTTATTCATCCATGAGGACTGCTTTTCTCTCTGTGTTTGAAGACCC
                      ____________________________________________________________
consensus             CCCAGGCTTAACCCCTTATTCATCCATGAGGACTGCTTTTCTCTCTGTGTTTGAAGACCC
 
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rJMSF034P03+          TATCATCGCCATCACTCACCATCAACTTGGGCTGGAAGACTTCATTGGCTGCTCTTCTGT
rJMSF019I06+          TATCATCGCCATCACTCACCATCAACTTGGGCTGGAAGACTTCATTGGCTGCTCTTCTGT
                      ____________________________________________________________
consensus             TATCATCGCCATCACTCACCATCAACTTGGGCTGGAAGACTTCATTGGCTGCTCTTCTGT
 
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rJMSF034P03+          TCATGGAATCGGCCCCACCATCGCCATTTTTGACACCATTAGAGATGGGGAGTTGGACTG
rJMSF019I06+          TCATGGAATCGGCCCCACCATCGCCATTTTTGACACCATTAGAGATGGGGAGTTGGACTG
                      ____________________________________________________________
consensus             TCATGGAATCGGCCCCACCATCGCCATTTTTGACACCATTAGAGATGGGGAGTTGGACTG
 
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rJMSF034P03+          TGCTTGTGTGTACCCTTCTCCATTACACTCTAGGCACCAAATGCAGGGGTTGATTGATGA
rJMSF019I06+          TGCTTGTGTGTACCCTTCTCCATTACACTCTAGGCACCAAATGCAGGGGTTGATTGATGA
                      ____________________________________________________________
consensus             TGCTTGTGTGTACCCTTCTCCATTACACTCTAGGCACCAAATGCAGGGGTTGATTGATGA
 
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rJMSF034P03+          CATCAAGAGGATTCTTCTTCAATCTTAGCATCCGATCGATCCAACCATTATATTGTATCA
rJMSF019I06+          CATCAAGAGGATTCTTCTTCAATCTTAGCATCCGATCGATCCAGCCATTATATTGTATCA
                      ____________________________________________________________
consensus             CATCAAGAGGATTCTTCTTCAATCTTAGCATCCGATCGATCCAGCCATTATATTGTATCA
 
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rJMSF034P03+          AT                                                          
rJMSF019I06+          ATTACAATTACCCCTTTTAACAAATGATTATTTGGACGTACTATTTATTTCATCCTCTCT
                      ____________________________________________________________
consensus             ATTACAATTACCCCTTTTAACAAATGATTATTTGGACGTACTATTTATTTCATCCTCTCT