Contig 012589:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019F24+                                                  TATCGGTNCATNTTCCGTAT
                      ____________________________________________________________
consensus                                                     TATCGGTNCATNTTCCGTAT
 
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rJMFF027A18+                                                          TGGGTATGCTGG
rJMSF019F24+          GGTACCGGGATGTTCACCAGGACGTGGATTCATTCGAAACGGAGCTTGTGGGTATGCTGG
                      ____________________________________________________________
consensus             GGTACCGGGATGTTCACCAGGACGTGGATTCATTCGAAACGGAGCTTGTGGGTATGCTGG
 
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rJMFF027A18+          CGGATTTTATCCGGTACGATTGGTACAAAGCTCACGGCGTCATCGACGCGTCCGACGAGG
rJMSF019F24+          CGGATTTTATCCGGTACGATTGGTACAAAGCTCACGGCGTCATCGACGCGTCCGACGAGG
                      ____________________________________________________________
consensus             CGGATTTTATCCGGTACGATTGGTACAAAGCTCACGGCGTCATCGACGCGTCCGACGAGG
 
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rJMFF027A18+          TTGACGGGTCGCAGTCCGGCGCGTCGCCGGGGGAATACAGGCTGGCCGTGATCGGAACCG
rJMSF019F24+          TTGACGGGTCGCAGTCCGGCGCGTCGCCGGGGGAATACAGGCTGGCCGTGATCGGAACCG
                      ____________________________________________________________
consensus             TTGACGGGTCGCAGTCCGGCGCGTCGCCGGGGGAATACAGGCTGGCCGTGATCGGAACCG
 
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rJMFF027A18+          TGGCGCTCTCCAGATCGCCGGCGTTCGAGGCCGACGACGAAAGCCTGCAGCCCGCGAGCG
rJMSF019F24+          TGGCGCTCTCCAGATCGCCGGCGTTCGAGGCCGACGACGAAAGCCTGCAGCCCGCGAGCG
                      ____________________________________________________________
consensus             TGGCGCTCTCCAGATCGCCGGCGTTCGAGGCCGACGACGAAAGCCTGCAGCCCGCGAGCG
 
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rJMFF027A18+          TATCCGCAGGGTTCCCCACGGCCGAGAGCGTAACGGACGTGACGGAGAGGTTGCCGCCGG
rJMSF019F24+          TATCCGCAGGGTTCCCCACGGCCGAGAGCGTAACGGACGTGACGGAGAGGTTGCCGCCGG
                      ____________________________________________________________
consensus             TATCCGCAGGGTTCCCCACGGCCGAGAGCGTAACGGACGTGACGGAGAGGTTGCCGCCGG
 
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rJMFF027A18+          CGCCGAAAAGAGTGAGGTTTGCGGTGGACGAGGAATCTTCGGAGGTGGACTCGCGGTCGG
rJMSF019F24+          CGCCGAAAAGAGTGAGGTTTGCGGTGGACGAGGAATCTTCGGAGGTGGACTCGCGGTCGG
                      ____________________________________________________________
consensus             CGCCGAAAAGAGTGAGGTTTGCGGTGGACGAGGAATCTTCGGAGGTGGACTCGCGGTCGG
 
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rJMFF027A18+          AAATGGAGATTCAGCTGCAATCGGAGCTGGAAGAGCTGTACGCGGCGCAACAGGCCGGCA
rJMSF019F24+          AAATGGAGATTCAGCTGCAATCGGAGCTGGAAGAGCTGTACGCGGCGCAACAGGCCGGCA
                      ____________________________________________________________
consensus             AAATGGAGATTCAGCTGCAATCGGAGCTGGAAGAGCTGTACGCGGCGCAACAGGCCGGCA
 
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rJMFF027A18+          TAGCCTTCATCCTCGGACATTCGCACGTAAGAACGAAACAAGGGTCGTCTCTTTTCAAGA
rJMSF019F24+          TAGCCTTCATCCTCGGACATTCGCACGTAAGAACGAAACAAGGGTCGTCTCTTTTCAAGA
                      ____________________________________________________________
consensus             TAGCCTTCATCCTCGGACATTCGCACGTAAGAACGAAACAAGGGTCGTCTCTTTTCAAGA
 
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rJMFF027A18+          GATTGGCCATTAATTTCGGGTATAATTTTCTGGGGAGGAATTGCAGAGGCACAGATGTGT
rJMSF019F24+          GATTGGCCATTAATTTCGGGTATAATTTTCTGGGGAGGAATTGCAGAGGCACAGATGTGT
                      ____________________________________________________________
consensus             GATTGGCCATTAATTTCGGGTATAATTTTCTGGGGAGGAATTGCAGAGGCACAGATGTGT
 
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rJMFF027A18+          CGTTGAAGGTTCC-CCGGCGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTTTGAATCC
rJMSF019F24+          CGTTGAAGGTTCCGCCGGCGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTTTGAATCC
                      ____________________________________________________________
consensus             CGTTGAAGGTTCCGCCGGCGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTTTGAATCC
 
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rJMFF027A18+          AAAAAAGGATGAAATTTTCTATATTATATTACAAGGTTCTTTGTTTTGAGTGTTAAGAGA
rJMSF019F24+          AAAAAAGGATGAAATTTTCTATATTATATTACAAGGTTCTTTGTTTTGAGTGTTAAGAGA
                      ____________________________________________________________
consensus             AAAAAAGGATGAAATTTTCTATATTATATTACAAGGTTCTTTGTTTTGAGTGTTAAGAGA
 
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rJMFF027A18+          ATAGTGATACATGTTATATATATGTAGTAGTAAAGTACTCTTCTTCCATGTGAAATCTCA
rJMSF019F24+          ATAGTGATACATGTTATATATATGTAGTAGTAAAGTACTCTTCTTCCATGTGAAATCTCA
                      ____________________________________________________________
consensus             ATAGTGATACATGTTATATATATGTAGTAGTAAAGTACTCTTCTTCCATGTGAAATCTCA
 
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rJMFF027A18+          ACTTATGAATCTTGGGAAATGT                                      
rJMSF019F24+          ACTTATGAATCTTGGGAAATGTTGTCTTTTATTTCAATGTTAACATGTAGAAAGAAGTTG
                      ____________________________________________________________
consensus             ACTTATGAATCTTGGGAAATGTTGTCTTTTATTTCAATGTTAACATGTAGAAAGAAGTTG