Contig 012585:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018L03+                                                                TAAAAG
                      ____________________________________________________________
consensus                                                                   TAAAAG
 
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rJMSF018L03+          CATGCTAGATGATGNCAATAGATTGCTCAAGGCAGAAGATCGGTCATCTGTACCTTTGGT
                      ____________________________________________________________
consensus             CATGCTAGATGATGNCAATAGATTGCTCAAGGCAGAAGATCGGTCATCTGTACCTTTGGT
 
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rJMSF026A18+                      TGCTCATTCTGTTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
rJMSF018L03+          ANTGATCTGCCCTGCTCATTCTGGTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
                      ____________________________________________________________
consensus             ANTGATCTGCCCTGCTCATTCTGTTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
 
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rJMSF026A18+          CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
rJMSF018L03+          CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
                      ____________________________________________________________
consensus             CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
 
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rJMSF026A18+          TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
rJMSF018L03+          TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
                      ____________________________________________________________
consensus             TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
 
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rJMSF026A18+          CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
rJMSF018L03+          CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
                      ____________________________________________________________
consensus             CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
 
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rJMSF026A18+          AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
rJMSF018L03+          AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
                      ____________________________________________________________
consensus             AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
 
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rJMSF026A18+          AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
rJMSF018L03+          AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
                      ____________________________________________________________
consensus             AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
 
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rJMSF026A18+          CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
rJMSF018L03+          CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
                      ____________________________________________________________
consensus             CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
 
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rJMSF026A18+          GAGGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
rJMSF018L03+          GAAGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
                      ____________________________________________________________
consensus             GAGGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
 
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rJMSF026A18+          TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
rJMSF018L03+          TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
                      ____________________________________________________________
consensus             TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
 
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rJMSF026A18+          GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
rJMSF018L03+          GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
                      ____________________________________________________________
consensus             GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
 
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rJMSF026A18+          AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
rJMSF018L03+          AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
                      ____________________________________________________________
consensus             AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
 
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rJMSF026A18+          ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAAC     
rJMSF018L03+          ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAACGTTAT
                      ____________________________________________________________
consensus             ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAACGTTAT