Contig 012583:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018I21Sequence246018897773012583 (2)
JMSF027J04Sequence296005124 (3)384012583 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027J04+ TTCCCTTTGGGT
rJMSF018I21+ TTTATAAATATATATAGTTATATATTCCTGGGNTTCTTAATTTCCCTTTGTGT
                      ____________________________________________________________
consensus TTTATAAATATATATAGTTATATATTCCTGGGNTTCTTAATTTCCCTTTGTGT
 
. : . : . : . : . : . :
rJMSF027J04+ CAGTGTCTTATCTCNTGATTTTCGTTCTATCTGCCACATTTTAATATATTTTTAGCCGGT
rJMSF018I21+ CAGTGTCTTATCTCNTGATTTTCGTTCTATCTGCCACATTTTAATATATTTTTAGCCGGT
                      ____________________________________________________________
consensus CAGTGTCTTATCTCNTGATTTTCGTTCTATCTGCCACATTTTAATATATTTTTAGCCGGT
 
. : . : . : . : . : . :
rJMSF027J04+ TTTTCTTTGGGGATTTTGAGATTTCCTTTCTGTTTTGGGTATTTCCACAAATGGAAAGGA
rJMSF018I21+ TTTTCTTTGGGGATTTTGAGATTTCCTTTCTGTTTTGGGTATTTCCACAAATGGAAAGGA
                      ____________________________________________________________
consensus TTTTCTTTGGGGATTTTGAGATTTCCTTTCTGTTTTGGGTATTTCCACAAATGGAAAGGA
 
. : . : . : . : . : . :
rJMSF027J04+ GTGGTTGAACCTCTCTGCAGTGCTAGTTACTGTTTTTTCCAGTACCTTTTAACAATATTG
rJMSF018I21+ GTGGTTGAACCTCTCTGCAGTGCTAGTTACTGTTTTTTCCAGTACCTTTTAACAATATTG
                      ____________________________________________________________
consensus GTGGTTGAACCTCTCTGCAGTGCTAGTTACTGTTTTTTCCAGTACCTTTTAACAATATTG
 
. : . : . : . : . : . :
rJMSF027J04+ CAGGTTTTAATTTCTTGGGCAAATTAAAGGAAGATTTGAGTTTGAAAAGTCACACTAAAT
rJMSF018I21+ CAGGTTTTAATTTCTTGGGCAAATTAAAGGAAGATTTGAGTTTGAAAAGTCACACTAAAT
                      ____________________________________________________________
consensus CAGGTTTTAATTTCTTGGGCAAATTAAAGGAAGATTTGAGTTTGAAAAGTCACACTAAAT
 
. : . : . : . : . : . :
rJMSF027J04+ ATGACAGAATTACTACCTACAGATATGATTATGGATCATTCTTAGCAAGCTGTAGTGTCA
rJMSF018I21+ ATGACAGAATTACTACCTACAGATATGATTATGGATCATTCTTAGCAAGCTGTAGTGTCA
                      ____________________________________________________________
consensus ATGACAGAATTACTACCTACAGATATGATTATGGATCATTCTTAGCAAGCTGTAGTGTCA
 
. : . : . : . : . : . :
rJMSF027J04+ TGATCTAAAGGTGCCCACACGGGTTTACCTCACTGATTTAGTAGACAGTATTTGGAAGAA
rJMSF018I21+ TGATCTAAAGGTGCCCACACGGGTTTACCTCACTGATTTAGTAGACAGTATTTGGAAGAA
                      ____________________________________________________________
consensus TGATCTAAAGGTGCCCACACGGGTTTACCTCACTGATTTAGTAGACAGTATTTGGAAGAA
 
. : . : . : . : . : . :
rJMSF027J04+ GATCTAAAGGT
rJMSF018I21+ GATCTAAAGGTAAGAGTTCTCTGTTCAACCTCCGATTCATTCGTTTCAAATGTACTAATA
                      ____________________________________________________________
consensus GATCTAAAGGTAAGAGTTCTCTGTTCAACCTCCGATTCATTCGTTTCAAATGTACTAATA
 
. : . : . : . : . : . :
rJMSF018I21+ AAGAAAGATATTTATTTTCAAGAATTATATATTCAGATTTAAATGTCTTAGGGTGTTCGA
                      ____________________________________________________________
consensus AAGAAAGATATTTATTTTCAAGAATTATATATTCAGATTTAAATGTCTTAGGGTGTTCGA
 
. : . : . : . : . : . :
rJMSF018I21+ AAAACTATCTAATTTAATTTATGACTAAGATTTACAGGACATGAAGTGTTACACTTGGGA
                      ____________________________________________________________
consensus AAAACTATCTAATTTAATTTATGACTAAGATTTACAGGACATGAAGTGTTACACTTGGGA
 
. : . : . : . : . : . :
rJMSF018I21+ CCGATATGTTGACAACCTCCTTGAATTGGGGCGATTGATGAACTACATTTCAATCTCAAG
                      ____________________________________________________________
consensus CCGATATGTTGACAACCTCCTTGAATTGGGGCGATTGATGAACTACATTTCAATCTCAAG
 
. : . : . : . : . : . :
rJMSF018I21+ GTATATATATATTCTTTTAAAGAATTGAAATATGTGTTAGTTTTTTGTATATATTGTTAA
                      ____________________________________________________________
consensus GTATATATATATTCTTTTAAAGAATTGAAATATGTGTTAGTTTTTTGTATATATTGTTAA
 
. : . : . : . : . : . :
rJMSF018I21+ TGTGTGATGTCTCCTAGAAATGAATTGAATTGATTATATATGGAGAAATTTTGGGAATTA
                      ____________________________________________________________
consensus TGTGTGATGTCTCCTAGAAATGAATTGAATTGATTATATATGGAGAAATTTTGGGAATTA