| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF015H23 | Sequence | 282 | 005025 (4) | ref|XP_004228642.1| | 9e-35 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 846 | 012580 (4) | ref|XP_008221466.1| | 2e-102 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF016P13 | Sequence | 455 | 005025 (4) | ref|XP_004228642.1| | 8e-70 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 740 | 012580 (4) | ref|XP_008221466.1| | 3e-89 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF017N17 | Sequence | 444 | 005025 (4) | ref|XP_004228642.1| | 2e-67 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 754 | 012580 (4) | ref|XP_008221466.1| | 3e-89 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF024H21 | Sequence | 666 | 005025 (4) | ref|XP_004228642.1| | 9e-118 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 804 | 012580 (4) | ref|XP_008221466.1| | 2e-116 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
This contig is upended
. : . : . : . : . : . :
rJMSF024H21+ TNATCACAGCTTCC
____________________________________________________________
consensus TNATCACAGCTTCC
. : . : . : . : . : . :
rJMSF024H21+ ATCCAAATGCTGAAATCGTACAGGAACGTGAAGCAGGTGACGGGAAAATGCTCGTAAAGG
rJMSF015H23+ CGTAAAGG
____________________________________________________________
consensus ATCCAAATGCTGAAATCGTACAGGAACGTGAAGCAGGTGACGGGAAAATGCTCGTAAAGG
. : . : . : . : . : . :
rJMSF024H21+ TGATTGCTGCAGAACATATCAAACGAAGCGATGCATTAGAACTTAACTATGGCTGTCTAA
rJMSF015H23+ TGATTGCTGCAGAACATATCCAACGGAGCGATGCA-TAGNACTTAACTATGGCTGTCTAA
____________________________________________________________
consensus TGATTGCTGCAGAACATATCCAACGGAGCGATGCATTAGAACTTAACTATGGCTGTCTAA
. : . : . : . : . : . :
rJMSF024H21+ ATAACGATCTTTTTCTTCTTGATTATGGATTTGTCGTACCCTCCAATCCATATGACTGCA
rJMSF016P13+ GGATTTGTCGTACCCTCCAATCCATATGACTGCA
rJMSF015H23+ ATAACGATCTTTTTCTTCTTGATTATGGATTTGTCGTACCCTCCAATCCATATGACTGCA
rJMSF017N17+ GGATTTGTCGTACCCTCCAATCCATATGACTGCA
____________________________________________________________
consensus ATAACGATCTTTTTCTTCTTGATTATGGATTTGTCGTACCCTCCAATCCATATGACTGCA
. : . : . : . : . : . :
rJMSF024H21+ TTGAACTCAGGTACGATCCCGCTCTTCTCGATGCTGCAAGTATGGCTGCTGGAGTTGAAT
rJMSF016P13+ TTGAACTCAGGTACGATCCCGCTCTTCTCGATGCTGCAAGTATGGCTGCTGGAGTTGAAT
rJMSF015H23+ TTGAACTCAGGTACGATCCCGCTCTTCTCGATGCTGCAAGTATGGCTGCTGGAGTTGAAT
rJMSF017N17+ TTGAACTCAGGTACGATCCCGCTCTTCTCGATGCTGCAAGTATGGCTGCTGGAGTTGAAT
____________________________________________________________
consensus TTGAACTCAGGTACGATCCCGCTCTTCTCGATGCTGCAAGTATGGCTGCTGGAGTTGAAT
. : . : . : . : . : . :
rJMSF024H21+ CCCCGAACTTCTCTTCACCATCTCCTTGGCAGCGGGAGATTTTGTCCCAGCTAAATCTCG
rJMSF016P13+ CCCCGAACTTCTCTTCACCATCTCCTTGGCAGCGGGAGATTTTGTCCCAGCTAAATCTCG
rJMSF015H23+ CCCCGAACTTCTCTTCACCATCTCCTTGGCAGCGGGAGATTTTGTCCCAGCTAAATCTCG
rJMSF017N17+ CCCCGAACTTCTCTTCACCATCTCCTTGGCAGCGGGAGATTTTGTCCCAGCTAAATCTCG
____________________________________________________________
consensus CCCCGAACTTCTCTTCACCATCTCCTTGGCAGCGGGAGATTTTGTCCCAGCTAAATCTCG
. : . : . : . : . : . :
rJMSF024H21+ ATGGCGAAAATCCTGATCTAAAGGTAACGATAGGAGGTCCCGAGCTCGTAGAGGGGCGTT
rJMSF016P13+ ATGGCGAAAATCCTGATCTAAAGGTAACGATAGGAGGTCCCGAGCTCGTAGAGGGGCGTT
rJMSF015H23+ ATGGCGAAAATCCTGATCTAAAGGTAACGATAGGAGGTCCCGAGCTTGTAGAGGGGCGTT
rJMSF017N17+ ATGGCGAAAATCCTGATCTGAAGGTAACGATAGGAGGTCCCGAGCTCGTAGAGGGGCGTT
____________________________________________________________
consensus ATGGCGAAAATCCTGATCTAAAGGTAACGATAGGAGGTCCCGAGCTCGTAGAGGGGCGTT
. : . : . : . : . : . :
rJMSF024H21+ TGATGGCTGCATTACGAGCTTTCCTATCGAATGACATGGAGTCGGTCCGAAACCACAGCA
rJMSF016P13+ TGATGGCTGCATTACGAGCTTTCCTATCGAATGACATGGAGTCGGTCCGAAACCACAGCA
rJMSF015H23+ TGATGGCTGCATTACGAGCTTTCCTATCGAATGACATGGAGTCGGTCCGAAACCACAGCA
rJMSF017N17+ TGATGGCTGCATTACGAGCTTTCCTATCGAATGACATGGAGTCGGTCCGAAACCACAGCA
____________________________________________________________
consensus TGATGGCTGCATTACGAGCTTTCCTATCGAATGACATGGAGTCGGTCCGAAACCACAGCA
. : . : . : . : . : . :
rJMSF024H21+ TGGACACGCTTAAGTCATTGTCGGTTGAACCTCAACCACCGCTTGGAACTGCAAACGAAG
rJMSF016P13+ TGGACACGCTTAAGTCATTGTCGGTTGAACCTCAACCACCGCTTGGAACTGCAAACGAAG
rJMSF015H23+ TGGACACGCTTAAGTCATTGTCGGTTGAACCTCAACCACCGCTTGGAACTGCAAACGAAG
rJMSF017N17+ TGGACACGCTTAAGTCATTGTCGGTTGAACCTCAACCACCGCTTGGAACTGCAAACGAAG
____________________________________________________________
consensus TGGACACGCTTAAGTCATTGTCGGTTGAACCTCAACCACCGCTTGGAACTGCAAACGAAG
. : . : . : . : . : . :
rJMSF024H21+ TGGCTGCTCTCCGCACTGTCACCGCCTTGTGCGTGATTGCGCTTGGGCACTTCCCGACTA
rJMSF016P13+ TGGCTGCTCTCCGCACTGTCACCGCCTTGTGCGTGATTGCGCTTGGGCACTTCCCGACTA
rJMSF015H23+ TGGCTGCTCTCCGCACTGTCACCGCCTTGTGCGTGATTGCGCTTGGGCACTTCCCGACTA
rJMSF017N17+ TGGCTGCTCTCCGCACTGTCACCGCCTTGTGCGTGATTGCGCTTGGGCACTTCCCGACTA
____________________________________________________________
consensus TGGCTGCTCTCCGCACTGTCACCGCCTTGTGCGTGATTGCGCTTGGGCACTTCCCGACTA
. : . : . : . : . : . :
rJMSF024H21+ AGATCATGGAGGATGAGGCGTTGTTGAAACAAAACGTGTCTGCTACGACTGATTTGGCCA
rJMSF016P13+ AGATCATGGAGGATGAGGCGTTGTTGAAACAAAACGTGTCTGCTACGACTGATTTGGCCA
rJMSF015H23+ AGATCATGGAGGATGAGGCGTTGTTGAAACAAAACGTGTCTGCTACGACTGATTTGGCCA
rJMSF017N17+ AGATCATGGAGGATGAGGCGTTGTTGAAACAAAACGTGTCTGCTACGACTGATTTGGCCA
____________________________________________________________
consensus AGATCATGGAGGATGAGGCGTTGTTGAAACAAAACGTGTCTGCTACGACTGATTTGGCCA
. : . : . : . : . : . :
rJMSF024H21+ TTCGGTTCAGAATCCAAAAGAAGTCTGTCATTATAGATGTTATGCGGGATCTTACGAGGA
rJMSF016P13+ TTCGGTTCAGAATCCAAAAGAAGTCTGTCATTATAGATGTTATGCGGGATCTTACGAGGA
rJMSF015H23+ TTCGGTTCAGAATCCAAAAGAAGTCTGTCATTATAGATGTTATGCGGGATCTTACGAGGA
rJMSF017N17+ TTCGGTTCAGAATCCAAAAGAAGTCTGTCATTATAGATGTTATGCGGGATCTTACGAGGA
____________________________________________________________
consensus TTCGGTTCAGAATCCAAAAGAAGTCTGTCATTATAGATGTTATGCGGGATCTTACGAGGA
. : . : . : . : . : . :
rJMSF024H21+ GGGTGAAGTTGCTCCTCTCGAAGGAATCTGCTACTGCCCAAAGCTAGCTAGGTATCAATC
rJMSF016P13+ GGGTGAAGTTGCTCCTCTCGAAGGAATCTGCTACTGCCCAAAGCTAGCTAGGTATCAATC
rJMSF015H23+ GGGTGAAGTTGCTCCTCTCGAAGGAATCTGCTACTGCCCAAAGCTAGCTAGGTATCAATC
rJMSF017N17+ GGGTGAAGTTGCTCCTCTCGAAGGAATCTGCTACTGCCCAAAGCTAGCTAGGTATCAATC
____________________________________________________________
consensus GGGTGAAGTTGCTCCTCTCGAAGGAATCTGCTACTGCCCAAAGCTAGCTAGGTATCAATC
. : . : . : . : . : . :
rJMSF024H21+ TCCCCTTCTAGAAGAGCTTTTCACATATGAAGAATTTGTTGTACTATAATGCAAGTCTTG
rJMSF016P13+ TCCCCTTCTAGAAGAGCTTTTCACATATGAAGAATTTGTTGTACTATAATGCAAGTCTTG
rJMSF015H23+ TCCCCTTCTAGAAGAGCTTTTCACATATGAAGAATTTGTTGTACTATAATGCAAGTCTTG
rJMSF017N17+ TCCCCTTCTAGAAGAGCTTTTCACATATGAAGAATTTGTTGTACTATAATGCAAGTCTTG
____________________________________________________________
consensus TCCCCTTCTAGAAGAGCTTTTCACATATGAAGAATTTGTTGTACTATAATGCAAGTCTTG
. : . : . : . : . : . :
rJMSF024H21+ TCTCATAT
rJMSF016P13+ TCTCATATTGAGCAACTTTTGATAGTGTTATACCTTTGATCTTCTATGATTCCTTGTTTT
rJMSF015H23+ TCTCATATTGAGCAACTTTTGATAGTGTTATACCTTTGATCTTCTATGATTCCTTGTTTT
rJMSF017N17+ TCTCATATTGAGCAACTTTTGATAGTGTTATACCTTTGATCTTCTATGATTCCTTGTTTT
____________________________________________________________
consensus TCTCATATTGAGCAACTTTTGATAGTGTTATACCTTTGATCTTCTATGATTCCTTGTTTT
. : . : . : . : . : . :
rJMSF016P13+ CTCATTTGGCCGACTTAGAATGGAATCATTGAAGAATACAACTT
rJMSF015H23+ CTCATTTGGCCGACTTAGAATGGAATCATTGAAGAATACAACTTTGATATTGCATCTCT
rJMSF017N17+ CTCATTTGGCCGACTTAGAATGGAATCATTGAAGAATACAACTTTGATATTGCATCTCTT
____________________________________________________________
consensus CTCATTTGGCCGACTTAGAATGGAATCATTGAAGAATACAACTTTGATATTGCATCTCTT