Contig 012575:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024E08+                                               TACTAGATGAGCCATGGAATGCA
rJMSF017C23+                                                  TAGATGAGCAATGGAATGCA
                      ____________________________________________________________
consensus                                                  TACTAGATGAGCCATGGAATGCA
 
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rJMSF024E08+          AAGCTATCAGACTTTGGGTTAGCTAGGTTGGGTCCTCCCGAAGGGCGTACTCACGTCTCA
rJMSF017C23+          AAGCTATCAGACTTTGGGTTAGCTAGGTTGGGTCCTCCCGAAGGGCGTACTCACGTCTCA
                      ____________________________________________________________
consensus             AAGCTATCAGACTTTGGGTTAGCTAGGTTGGGTCCTCCCGAAGGGCGTACTCACGTCTCA
 
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rJMSF024E08+          ACTGCGGTGGTTGGAACAATGGGATATGCTTCTCCTGAATATATTCAAACAGGTCGTCTC
rJMSF017C23+          ACTGCGGTGGTTGGAACAATGGGATATGCTTCTCCTGAATATATTCAAACAGGTCGTCTC
                      ____________________________________________________________
consensus             ACTGCGGTGGTTGGAACAATGGGATATGCTTCTCCTGAATATATTCAAACAGGTCGTCTC
 
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rJMSF024E08+          ACATTCAAGAATGATGTATGGAGCTATGGAGTGTTTCTCTATGAACTCATCACAGGGAGA
rJMSF017C23+          ACATTCAAGAATGATGTATGGAGCTATGGAGTGTTTCTCTATGAACTCATCACAGGGAGA
                      ____________________________________________________________
consensus             ACATTCAAGAATGATGTATGGAGCTATGGAGTGTTTCTCTATGAACTCATCACAGGGAGA
 
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rJMSF024E08+          CGCCCGTTGGATAGGAATCGTCCCAAGAGTGAGCAGAAGCTCTTGGAATGGATAAAGCCA
rJMSF017C23+          CGCCCGTTGGATAGGAATCGTCCCAAGAGTGAGCAGAAGCTCTTGGAATGGATAAAGCCA
                      ____________________________________________________________
consensus             CGCCCGTTGGATAGGAATCGTCCCAAGAGTGAGCAGAAGCTCTTGGAATGGATAAAGCCA
 
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rJMSF024E08+          TATGTATCAGATTCAAAGAAGTTTCATATGATAGTAGACCCTAGGCTTGAAGGCAATTTC
rJMSF017C23+          TATGTATCAGATTCAAAGAAGTTTCATATGATAGTAGACCCTAGGCTTGAAGGCAATTTC
                      ____________________________________________________________
consensus             TATGTATCAGATTCAAAGAAGTTTCATATGATAGTAGACCCTAGGCTTGAAGGCAATTTC
 
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rJMSF024E08+          GTAAGGTCAGCTCAGAAACTCTCTGTTGTTGCAAACCGCTGCTTGGTGAGACACCCAAAG
rJMSF017C23+          GTAAGGTCAGCTCAGAAACTCTCTGTTGTTGCAAACCGCTGCTTGGTGAGACACCCAAAG
                      ____________________________________________________________
consensus             GTAAGGTCAGCTCAGAAACTCTCTGTTGTTGCAAACCGCTGCTTGGTGAGACACCCAAAG
 
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rJMSF024E08+          TCACGCCCAAAGATGAGTGAAGTTCTGGAGATGGTGAACAACGTTGCAGAAGCATCCACA
rJMSF017C23+          TCACGCCCAAAGATGAGTGAAGTTCTGGAGATGGTGAACAACGTTGCAGAAGCATCCACA
                      ____________________________________________________________
consensus             TCACGCCCAAAGATGAGTGAAGTTCTGGAGATGGTGAACAACGTTGCAGAAGCATCCACA
 
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rJMSF024E08+          GGATTGGGGAATCCTCGGCGGCCCATAAGATCTTCACATCCTATTCCAAATAAAGACGAT
rJMSF017C23+          GGATTGGGGAATCCTCGGCGGCCCATAAGATCTTCACATCCTATTCCAAATAAAGACGAT
                      ____________________________________________________________
consensus             GGATTGGGGAATCCTCGGCGGCCCATAAGATCTTCACATCCTATTCCAAATAAAGACGAT
 
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rJMSF024E08+          ATTGACAGAAAAAAAGTTAAAATATGTTAAGTGATATCAAAGTTGGAGATGGTGGCTGGC
rJMSF017C23+          ATTGACAGAAAAAAAGTTAAAATATGTTAAGTGATATCAAAGTTGGAGATGGTGGCTGGC
                      ____________________________________________________________
consensus             ATTGACAGAAAAAAAGTTAAAATATGTTAAGTGATATCAAAGTTGGAGATGGTGGCTGGC
 
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rJMSF024E08+          TACATTGGTGAGAGATTTATGATGACGCGAGTCATAGAAGGAATTACTAACGTCTTCTAT
rJMSF017C23+          TACATTGGTGAGAGATTTATGATGACGCGAGTCATAGAAGGAATTACTAACGTCTTCTAT
                      ____________________________________________________________
consensus             TACATTGGTGAGAGATTTATGATGACGCGAGTCATAGAAGGAATTACTAACGTCTTCTAT
 
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rJMSF024E08+          TGATCATAAAAGTAGAGTGAAGTGCAAATTCTATTAGATTGGCTATACTAATGGCTGCAA
rJMSF017C23+          TGATCATAAAAGTAGAGTGAAGTGCAAATTCTATTAGATTGGCTATACTAATGGCTGCAA
                      ____________________________________________________________
consensus             TGATCATAAAAGTAGAGTGAAGTGCAAATTCTATTAGATTGGCTATACTAATGGCTGCAA
 
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rJMSF024E08+          TGATTTGGTGGTGAGAAAGCAAATGCCATAAAAATATTGTTTTGCTTTAGAAGCCCTCGA
rJMSF017C23+          TGATTTGGTGGTGAGAAAGCAAATGCCATAAAAATATTGTTTTGCTTTAGAAGCCCTCGA
                      ____________________________________________________________
consensus             TGATTTGGTGGTGAGAAAGCAAATGCCATAAAAATATTGTTTTGCTTTAGAAGCCCTCGA
 
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rJMSF024E08+          TCTATTCTTTTTGGAATTTATCCTTCAATTCTGTGTCAAAAGCCAC              
rJMSF017C23+          TCTATTCTTTTTGGAATTTATCCTTCAATTCTGTGTCAAAAGCCACCTGTGGTTGGCCAT
                      ____________________________________________________________
consensus             TCTATTCTTTTTGGAATTTATCCTTCAATTCTGTGTCAAAAGCCACCTGTGGTTGGCCAT