Contig 012574:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF013B04+                               ACCNTGGATCATCTTCATTTCCAGAAGCATACTTGCAAA
                      ____________________________________________________________
consensus                                  ACCNTGGATCATCTTCATTTCCAGAAGCATACTTGCAAA
 
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rJMSF013B04+          TAGCATATGCGGATGTTGTGATTCTTAACAAGATTGATCTGGTATCTCAAGATGGTTCTG
rJMSF017C11+                                                          AAGATGGTTCTG
                      ____________________________________________________________
consensus             TAGCATATGCGGATGTTGTGATTCTTAACAAGATTGATCTGGTATCTCAAGATGGTTCTG
 
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rJMSF013B04+          GATCAGCTCTAGATGAACTGGAGAAGGAGATACACAATATTAATT-CCCTTGCCAATATT
rJMSF017C11+          GATCAGCTCTAGATGANCTGGAGAAGGAGATACACAATATTAATTCCCCTTGCCAATATT
                      ____________________________________________________________
consensus             GATCAGCTCTAGATGAACTGGAGAAGGAGATACACAATATTAATTCCCCTTGCCAATATT
 
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rJMSF013B04+          ATTCATTCTGTTCGTTGTCAAGTTGACTTGTCTAAAATACTGAATTGCCAAGCATATGAT
rJMSF017C11+          ATTCATTCTGTTCGTTGTCAAGTTGACTTGTCTAAAATACTGAATTGCCAAGCATATGAT
                      ____________________________________________________________
consensus             ATTCATTCTGTTCGTTGTCAAGTTGACTTGTCTAAAATACTGAATTGCCAAGCATATGAT
 
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rJMSF013B04+          CCAACACATGTAACTCACTTGGAAGCATTGCTAGAAGCAAATAAATCTCTAACTACTCGA
rJMSF017C11+          CCAACACATGTAACTCACTTGGAAGCATTGCTAGAAGC-AATAAATCTCTAACTACTCGA
                      ____________________________________________________________
consensus             CCAACACATGTAACTCACTTGGAAGCATTGCTAGAAGCAAATAAATCTCTAACTACTCGA
 
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rJMSF013B04+          GATCTTCATGATACTGGTGTCCGAACGTTATGCATTTGTGAGTCACAGCAGATCAATCTT
rJMSF017C11+          GATCTTCATGATACTGGTGTCCGAACGTTATGCATTTGTGAGTCACAGCAGATCAATCTT
                      ____________________________________________________________
consensus             GATCTTCATGATACTGGTGTCCGAACGTTATGCATTTGTGAGTCACAGCAGATCAATCTT
 
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rJMSF013B04+          GACAAGATTCGTGTGTGGCTCGAGGAACTCCTTTGGGACAAAAAGTATGGCATGGACATA
rJMSF017C11+          GACAAGATTCGTGTGTGGCTCGAGGAACTCCTTTGGGACAAAAAGTATGTCATGGACATA
                      ____________________________________________________________
consensus             GACAAGATTCGTGTGTGGCTCGAGGAACTCCTTTGGGACAAAAAGTATGTCATGGACATA
 
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rJMSF013B04+          TATCGCTGCAAGGGAATTTTAAGAGTCATGAATTCAGATCAGCTCTATACTCTGCAGGGT
rJMSF017C11+          TATCGCTGCAAGGGAATTTTAAGAGTCATGAATTCAGATCAGCTCTATACTCTGCAGGGT
                      ____________________________________________________________
consensus             TATCGCTGCAAGGGAATTTTAAGAGTCATGAATTCAGATCAGCTCTATACTCTGCAGGGT
 
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rJMSF013B04+          GTGAGAGAGATCTACGAGATTGTTTCAACTCGGGACTGGAGAAAGGAAGAAAACCAAATG
rJMSF017C11+          GTGAGAGAGATCTACGAGATTGTTTCAACTCGGGACTGGAGAAAGGAAGAAAACCAAATG
                      ____________________________________________________________
consensus             GTGAGAGAGATCTACGAGATTGTTTCAACTCGGGACTGGAGAAAGGAAGAAAACCAAATG
 
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rJMSF013B04+          AACAAAATAGTTTTCATAGGTAAATCGTTAAATGAAGACATTTTGTTGGATTCTCTAAGA
rJMSF017C11+          AACAAAATAGTTTTCATAGGTAAATCGTTAAATGAAGACATTTTGTTGGATTCTCTAAGA
                      ____________________________________________________________
consensus             AACAAAATAGTTTTCATAGGTAAATCGTTAAATGAAGACATTTTGTTGGATTCTCTAAGA
 
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rJMSF013B04+          GCTTGTGTAGTGGAAACCTCAACCTGAGCACATAGATGAGCTTCATGGAATTTAATACTT
rJMSF017C11+          GCTTGTGTAGTGGAAACCTCAACCTGAGCACATAGATGAGCTTCATGGAATTTAATACTT
                      ____________________________________________________________
consensus             GCTTGTGTAGTGGAAACCTCAACCTGAGCACATAGATGAGCTTCATGGAATTTAATACTT
 
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rJMSF013B04+          GGTAAACTGCCTTTATTTTTGGTTAGTTCAGTATACACCATAACTATCTAAGGTTCAATT
rJMSF017C11+          GGTAAACTGCCTTTATTTTTGGTTAGTTCAGTATACACCATAACTATCTAAGGTTCAATT
                      ____________________________________________________________
consensus             GGTAAACTGCCTTTATTTTTGGTTAGTTCAGTATACACCATAACTATCTAAGGTTCAATT
 
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rJMSF013B04+          TCATGATGTGCATGATGTAGAGTGTAGACAACAATTATACTATGCTCATCTCAACACTAC
rJMSF017C11+          TCATGATGTGCATGATGTAGAGTGTAGACAACAATTATACTATGCTCATCTCAACACTAC
                      ____________________________________________________________
consensus             TCATGATGTGCATGATGTAGAGTGTAGACAACAATTATACTATGCTCATCTCAACACTAC
 
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rJMSF013B04+          TTGTATACATTT                                                
rJMSF017C11+          TTGTATACATTTTGATGCCAGACTTTTGTGTGTAATTTGTAAGGTGGCTATATCCTCTCC
                      ____________________________________________________________
consensus             TTGTATACATTTTGATGCCAGACTTTTGTGTGTAATTTGTAAGGTGGCTATATCCTCTCC