| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF016K12 | Sequence | 527 | 003564 (11) | ref|XP_009761854.1| | 2e-47 | PREDICTED: serine carboxypeptidase-like 18 [Nicotiana sylvestris] | 749 | 012572 (3) | gb|KHG16860.1| | 6e-47 | Serine carboxypeptidase-like 19 [Gossypium arboreum] |
| JMSF029G08 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 2e-65 | unnamed protein product [Coffea canephora] | 764 | 012572 (3) | ref|XP_009768014.1| | 2e-56 | PREDICTED: serine carboxypeptidase-like 17 [Nicotiana sylvestris] |
| JMSF048M03 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 2e-65 | unnamed protein product [Coffea canephora] | 755 | 012572 (3) | ref|XP_009771129.1| | 7e-54 | PREDICTED: serine carboxypeptidase-like 13 isoform X2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF048M03+ GCTCAAGCCATATCATATGGGATTGATGCAAGATTTAGCCACATGT
____________________________________________________________
consensus GCTCAAGCCATATCATATGGGATTGATGCAAGATTTAGCCACATGT
. : . : . : . : . : . :
rJMSF048M03+ TAATCTTAAGGGTTACATAATTGGCAATGGAAACACATTTGCACTTGACATCCGCGATTA
____________________________________________________________
consensus TAATCTTAAGGGTTACATAATTGGCAATGGAAACACATTTGCACTTGACATCCGCGATTA
. : . : . : . : . : . :
rJMSF048M03+ TACTTACCGAACGGCTCGCGGATTAGGTCGTATTTCAGAAGAAGAGTATACGAAAATGGA
____________________________________________________________
consensus TACTTACCGAACGGCTCGCGGATTAGGTCGTATTTCAGAAGAAGAGTATACGAAAATGGA
. : . : . : . : . : . :
rJMSF048M03+ AGATTGTATAAAGATAAAGTTTTCTGATCCAAATTGCAGGAAAGAGATGACTGTGCTGTC
____________________________________________________________
consensus AGATTGTATAAAGATAAAGTTTTCTGATCCAAATTGCAGGAAAGAGATGACTGTGCTGTC
. : . : . : . : . : . :
rJMSF048M03+ CCTTTTTTATTGGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTTTGTGGGTT
rJMSF029G08+ TTTTTATTGGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTTTGTGGGTT
rJMSF016K12+ TTTTTATTGGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTTTGTGGGTT
____________________________________________________________
consensus CCTTTTTTATTGGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTTTGTGGGTT
. : . : . : . : . : . :
rJMSF048M03+ CAATGTACATGCCTTTGATCGTGGATTAATATTTTTGGCTGGACAAATTGCATCTCTGTG
rJMSF029G08+ CAATGTACATGCCTTTGATCGTGGATTAATATTTTTGGCTGGACAAATTGCATCTCTGTG
rJMSF016K12+ CAATGTACATGCCTTTGATCGTGGATTAATATTTTTGGCTGGACAAATTGCATCTCTGTG
____________________________________________________________
consensus CAATGTACATGCCTTTGATCGTGGATTAATATTTTTGGCTGGACAAATTGCATCTCTGTG
. : . : . : . : . : . :
rJMSF048M03+ GATTAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATG
rJMSF029G08+ GATTAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATG
rJMSF016K12+ GATTAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATG
____________________________________________________________
consensus GATTAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATG
. : . : . : . : . : . :
rJMSF048M03+ GGTTAAATGCAGGACGCGTTTGCCATATGAATTAACTGTGAACGACAGTAGACCATATCA
rJMSF029G08+ GGTTAAATGCAGGACGCGTTTGCCATATGAATTAACTGTGAACGACAGTAGACCATATCA
rJMSF016K12+ GGTTAAATGCAGGACGCGTTTGCCATATGAATTAACTGTGAACGACAGTAGACCATATCA
____________________________________________________________
consensus GGTTAAATGCAGGACGCGTTTGCCATATGAATTAACTGTGAACGACAGTAGACCATATCA
. : . : . : . : . : . :
rJMSF048M03+ TGCAAATCTTAGCACAAAAGGTTATAGATCTCTTATATACAGTGGAAGTGCTGATGTGTA
rJMSF029G08+ TGCAAATCTTAGCACAAAAGGTTATAGATCTCTTATATACAGTGGAAGTGCTGATGTGTA
rJMSF016K12+ TGCAAATCTTAGCACAAAAGGTTATAGATCTCTTATATACAGTGGAAGTGCTGATGTGTA
____________________________________________________________
consensus TGCAAATCTTAGCACAAAAGGTTATAGATCTCTTATATACAGTGGAAGTGCTGATGTGTA
. : . : . : . : . : . :
rJMSF048M03+ TATTTCTTCACTTTATACTGAATTCTGGACAAAATCATTGAATTATTCTATCATTGATGA
rJMSF029G08+ TATTTCTTCACTTTATACTGAATTCTGGACAAAATCATTGAATTATTCTATCATTGATGA
rJMSF016K12+ TATTTCTTCACTTTATACTGAATTCTGGACAAAATCATTGAATTATTCTATCATTGATGA
____________________________________________________________
consensus TATTTCTTCACTTTATACTGAATTCTGGACAAAATCATTGAATTATTCTATCATTGATGA
. : . : . : . : . : . :
rJMSF048M03+ TTGGCGACCTTGGATTGTGAACCATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF029G08+ TTGGCGACCTTGGATTGTGAACCATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF016K12+ TTGGCGACCTTGGATTGTGAACCATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
____________________________________________________________
consensus TTGGCGACCTTGGATTGTGAACCATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
. : . : . : . : . : . :
rJMSF048M03+ CATGACATATGCCAAAATCCTGGGATCAGACCATATTGCTCCAACAATAACACCCGCTGA
rJMSF029G08+ CATGACATATGCCAAAATCCTGGGATCAGACCATATTGCTCCAACAATAACACCCGCTGA
rJMSF016K12+ CATGACATATGCCAAAATCCTGGGATCAGACCATATTGCTCCAACAATAACACCCGCTGA
____________________________________________________________
consensus CATGACATATGCCAAAATCCTGGGATCAGACCATATTGCTCCAACAATAACACCCGCTGA
. : . : . : . : . : . :
rJMSF048M03+ ATGCTTCAAAATGTTTAAGAGATGGATATCTTATGAGCCACTTTAATAT
rJMSF029G08+ ATGCTTCAAAATGTTTAAGAGATGGATATCTTATGAGCCACTTTAATATTGTATGACAAT
rJMSF016K12+ ATGCTTCAAAATGTTTAAGAGATGGATATCTTATGAGCCACTTTAATATTGTATGACAAT
____________________________________________________________
consensus ATGCTTCAAAATGTTTAAGAGATGGATATCTTATGAGCCACTTTAATATTGTATGACAAT
. : . : . : . : . : . :
rJMSF029G08+ GG
rJMSF016K12+ GGTAAAATATATGTTAAAAGTACGTTTTATTCAATAACACATTGATGTACCCAAGTTTTA
____________________________________________________________
consensus GGTAAAATATATGTTAAAAGTACGTTTTATTCAATAACACATTGATGTACCCAAGTTTTA
. : . : . : . : . : . :
rJMSF016K12+ TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATTATTTTGTAGTAGAATA
____________________________________________________________
consensus TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATTATTTTGTAGTAGAATA