| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021D06 | Sequence | 462 | 012571 (8) | gb|AHC94919.1| | 1e-70 | early responsive to dehydration protein 15 [Ipomoea batatas] | 707 | 012571 (8) | gb|AHC94919.1| | 7e-91 | early responsive to dehydration protein 15 [Ipomoea batatas] |
| JMFF051E08 | Sequence | 576 | 012571 (8) | gb|AHC94919.1| | 9e-95 | early responsive to dehydration protein 15 [Ipomoea batatas] | 449 | 012571 (8) | gb|AHC94919.1| | 4e-34 | early responsive to dehydration protein 15 [Ipomoea batatas] |
| JMFN001E11 | Sequence | 513 | 012571 (8) | gb|AHC94919.1| | 5e-88 | early responsive to dehydration protein 15 [Ipomoea batatas] | |||||
| JMSF016G06 | Sequence | 567 | 012571 (8) | gb|AHC94919.1| | 7e-95 | early responsive to dehydration protein 15 [Ipomoea batatas] | 785 | 012571 (8) | gb|AHC94919.1| | 1e-93 | early responsive to dehydration protein 15 [Ipomoea batatas] |
| JMSF033L22 | Sequence | 622 | 003813 (6) | ref|XP_004253096.1| | 7e-63 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | 677 | 012571 (8) | gb|AHC94919.1| | 7e-78 | early responsive to dehydration protein 15 [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMSF033L22- CTCTT
____________________________________________________________
consensus CTCTT
. : . : . : . : . : . :
rJMSF033L22- TACATTTTTTTTCCTGGGCAGATTTCTGCATCTTTTCCAGTTTCATTTGTTTTCATCGAA
rJMFF021D06- GATTTCTGCATCTTTTCCAGTTTCATTTGTTTTCATCGAA
rJMFF051E08- CATTTTTTTTCCTGGGCAGATTTCTGCATCTTTTCCAGTTTCATTTGTTTTCATCGAA
rJMSF016G06- CATTTTTTTTCCTGGGCAGATTTCTGCATCTTTTCCAGTTTCATTTGTTTTCATCGAA
____________________________________________________________
consensus TACATTTTTTTTCCTGGGCAGATTTCTGCATCTTTTCCAGTTTCATTTGTTTTCATCGAA
. : . : . : . : . : . :
rJMSF033L22- CTGAACAAAGCACAATGTTCGGATATGAACAAGGCTAGATACAACAGCGGCAACCTACCT
rJMFF021D06- CTGAACAAAGCACAATGTTCGGATATGAACAAGGCTAGATACAACAGCGGCAACCTACCT
rJMFF051E08- CTGAACAAAGCACAATGTTCGGATATGAACAAGGCTAGATACAACAGCGGCAACCTACCT
rJMSF016G06- CTGAACAAAGCACAATGTTCGGATATGAACAAGGCTAGATACAACAGCGGCAACCTACCT
____________________________________________________________
consensus CTGAACAAAGCACAATGTTCGGATATGAACAAGGCTAGATACAACAGCGGCAACCTACCT
. : . : . : . : . : . :
rJMSF033L22- TGCTCTACACAGAAGCTACAAGAAACTAATTACAAAGACTCACACTGCTTCACCAAGAGT
rJMFF021D06- TGCTCTACACAGAAGCTACAAGAAACTAATTACAAAGACTCACACTGCTTCACCAAGAGT
rJMFF051E08- TGCTCTACACAGAAGCTACAAGAAACTAATTACAAAGACTCACACTGCTTCACCAAGAGT
rJMSF016G06- TGCTCTACACAGAAGCTACAAGAAACTAATTACAAAGACTCACACTGCTTCACCAAGAGT
____________________________________________________________
consensus TGCTCTACACAGAAGCTACAAGAAACTAATTACAAAGACTCACACTGCTTCACCAAGAGT
. : . : . : . : . : . :
rJMSF033L22- AATTCCAAATTAAGACTGCAGACATAAAGCGACTCCTGCTAGGAAAACATTCAGCGAGGT
rJMFF021D06- AATTCCAAATTACGACTGCAGACATAAAGCGACTCCTGCTAGGAAAACATTCAGCGAGGT
JMFF051E08+ AGGAAAACATTCAGCGAGGT
JMSF016G06+ TCAGCGAGGT
rJMFF051E08- AATTCCAAATTACGACTGCAGACATAAAGCGACTCCTGCTAGGAAAACATTCAGCGAGGT
rJMSF016G06- AATTCCAAATTACGACTGCAGACATAAAGCGACTCCTGCTAGGAAAACATTCAGCGAGGT
____________________________________________________________
consensus AATTCCAAATTACGACTGCAGACATAAAGCGACTCCTGCTAGGAAAACATTCAGCGAGGT
. : . : . : . : . : . :
rJMSF033L22- TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
rJMFF021D06- TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
JMFF051E08+ TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
JMSF016G06+ TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
JMFN001E11+ GCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
rJMFF051E08- TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
rJMSF016G06- TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
____________________________________________________________
consensus TGTTGGATGCGGCGAAGGCTGCATTTCGGGCTAACAACCTTTGCTGGCTTCTCAAAGTAC
. : . : . : . : . : . :
rJMSF033L22- CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
rJMFF021D06- CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
JMFF051E08+ CTGGGTGACACAAGGGATTTGNAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
JMFF021D06+ TTGTCAAGTTCAGACTTTTAACCAGT
JMSF016G06+ CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
JMFN001E11+ CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
rJMFF051E08- CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
rJMSF016G06- CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
____________________________________________________________
consensus CTGGGTGACACAAGGGATTTTGAACCTCTCTCCTTTGTCAAGTTCAGACTTTTAACCAGT
. : . : . : . : . : . :
rJMSF033L22- GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
rJMFF021D06- GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
JMFF051E08+ GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
JMFF021D06+ GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
JMSF016G06+ GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
JMFN001E11+ GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
rJMFF051E08- GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
rJMSF016G06- GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
____________________________________________________________
consensus GCATCAGGATGCTTTGCTGAACCTGATTCTGACACCCCCTTGATGCTGTTGACAAAACCA
. : . : . : . : . : . :
rJMSF033L22- TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
rJMFF021D06- TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
JMFF051E08+ TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
JMFF021D06+ TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
JMSF016G06+ TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
JMFN001E11+ TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
rJMFF051E08- TTGTTTCCTTGCCCTGTTTNCATTGATTGG
rJMSF016G06- TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
____________________________________________________________
consensus TTGTTTCCTTGCCCTGTTTCAATTGATTGGAGAAATTCTTCGTATTGATCTTCCATGTTC
. : . : . : . : . : . :
rJMSF033L22- AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
rJMFF021D06- AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
JMFF051E08+ AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
JMFF021D06+ AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
JMSF016G06+ AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
JMFN001E11+ AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
rJMSF016G06- AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
____________________________________________________________
consensus AAAATGTCATCATCAACATCAAGATCAATGTTATCTGGCAGCAAATCAGCAATATCATCA
. : . : . : . : . : . :
rJMSF033L22- TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
rJMFF021D06- TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
JMFF051E08+ TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
JMFF021D06+ TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
JMSF016G06+ TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
JMFN001E11+ TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
rJMSF016G06- TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
____________________________________________________________
consensus TCACCAAATCCAGCCTCATTGCAGCCATATTCTGATCCCTCCTTCTGGCCTACCCAGTAA
. : . : . : . : . : . :
rJMSF033L22- TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
rJMFF021D06- TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
JMFF051E08+ TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
JMFF021D06+ TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
JMSF016G06+ TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
JMFN001E11+ TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
rJMSF016G06- TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
____________________________________________________________
consensus TCATGGAACCATGTTGAGTTGGTTGCCAAGTCCCACCATTCCGGTGAGAAGTCCTCCACT
. : . : . : . : . : . :
rJMSF033L22- TGGCGTACAGAC
rJMFF021D06- TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
JMFF051E08+ TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
JMFF021D06+ TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
JMSF016G06+ TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
JMFN001E11+ TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
rJMSF016G06- TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
____________________________________________________________
consensus TGGCGTACAGACGCAGGAACAAAAGGTGCAGCGTTTGGATTCAGAGTTGACCTCCTTCCA
. : . : . : . : . : . :
rJMFF021D06- GA
JMFF051E08+ GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCT
JMFF021D06+ GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCT
JMSF016G06+ GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCT
JMFN001E11+ GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCTTCAAATGTCAAAAT
rJMSF016G06- GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCTTCAAATGTCAAAATGTCTTCCTT
____________________________________________________________
consensus GAAACTAAGGCCATGCTTCCTATTCAAATAACTATCTTCAAATGTCAAAATGTCTTCCTT