Contig 012570:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003L13Sequence382008719 (11)691012570 (2)emb|CBI21587.3|7e-43unnamed protein product [Vitis vinifera]
JMSF016C05Sequence375008719 (11)787012570 (2)ref|XP_011089568.1|2e-66PREDICTED: LOW QUALITY PROTEIN: auxilin-related protein 2-like [Sesamum indicum

Alignment

This contig is upended


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rJMSF016C05+                                                               CAGGAAG
                      ____________________________________________________________
consensus                                                                  CAGGAAG
 
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rJMSF016C05+          AAAGACATAGGATTGCGGAGACTTTGGATATTGAAATCAAGCGATGGGCTGCTGGGAAGG
                      ____________________________________________________________
consensus             AAAGACATAGGATTGCGGAGACTTTGGATATTGAAATCAAGCGATGGGCTGCTGGGAAGG
 
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rJMSF003L13+                                        TGCAATATGTTCTTTGGCCTGAATGTGGTT
rJMSF016C05+          AAGGAAATCTGCGTGCACTTCTATCAACTCTGCAATATGTTCTTTGGCCTGAATGTGGTT
                      ____________________________________________________________
consensus             AAGGAAATCTGCGTGCACTTCTATCAACTCTGCAATATGTTCTTTGGCCTGAATGTGGTT
 
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rJMSF003L13+          GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
rJMSF016C05+          GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
                      ____________________________________________________________
consensus             GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
 
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rJMSF003L13+          AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
rJMSF016C05+          AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
                      ____________________________________________________________
consensus             AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
 
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rJMSF003L13+          AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
rJMSF016C05+          AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
                      ____________________________________________________________
consensus             AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
 
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rJMSF003L13+          AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
rJMSF016C05+          AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
                      ____________________________________________________________
consensus             AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
 
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rJMSF003L13+          ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
rJMSF016C05+          ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
                      ____________________________________________________________
consensus             ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
 
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rJMSF003L13+          TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
rJMSF016C05+          TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
                      ____________________________________________________________
consensus             TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
 
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rJMSF003L13+          GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
rJMSF016C05+          GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
                      ____________________________________________________________
consensus             GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
 
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rJMSF003L13+          AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
rJMSF016C05+          AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
                      ____________________________________________________________
consensus             AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
 
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rJMSF003L13+          CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
rJMSF016C05+          CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
                      ____________________________________________________________
consensus             CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
 
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rJMSF003L13+          GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
rJMSF016C05+          GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
                      ____________________________________________________________
consensus             GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
 
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rJMSF003L13+          GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCA 
rJMSF016C05+          GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCAT
                      ____________________________________________________________
consensus             GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCAT