Contig 012566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015O18Sequence251000868 (5)ref|XP_009772873.1|1e-04PREDICTED: cell wall protein RBR3 isoform X2 [Nicotiana sylvestris]751012566 (3)ref|XP_009594511.1|3e-75PREDICTED: cell wall protein RBR3 isoform X1 [Nicotiana tomentosiformis]
JMSF044G21Sequence790000868 (5)ref|XP_006353835.1|3e-47PREDICTED: putative GPI-anchored protein PB15E9.01c-like [Solanum tuberosum]732012566 (3)ref|XP_009594511.1|1e-75PREDICTED: cell wall protein RBR3 isoform X1 [Nicotiana tomentosiformis]
JMSF051G18Sequence714000868 (5)ref|XP_006353835.1|3e-36PREDICTED: putative GPI-anchored protein PB15E9.01c-like [Solanum tuberosum]709012566 (3)ref|XP_009594520.1|3e-74PREDICTED: sialidase isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051G18+ AGGCGGCAACCATCACCTG
rJMSF044G21+ GAACTTTGCCTAGGCGGCAACCATCACCTG
rJMSF015O18+ GGAACTTNGCCTAGGCGGCAACCATCACCTG
                      ____________________________________________________________
consensus GGAACTTTGCCTAGGCGGCAACCATCACCTG
 
. : . : . : . : . : . :
rJMSF051G18+ TTGTTAGCAGGGGAAGACTCACAGAATCCTCTGNTAGTGGGCGGGGGCTTTCAAACGGGC
rJMSF044G21+ TTGTTAGCAGGGGAAGACTCACAGAATCCTCTGCTAGTGGGCGGGGGCTTTCAAACGGGC
rJMSF015O18+ TTGTTAGCAGGGGAAGACTCACAGAATCCTCTGCTAGTGGGCGGGGGCTTTCAAACGGGC
                      ____________________________________________________________
consensus TTGTTAGCAGGGGAAGACTCACAGAATCCTCTGCTAGTGGGCGGGGGCTTTCAAACGGGC
 
. : . : . : . : . : . :
rJMSF051G18+ ATGTGGNTGATACACTTGATTCTCGCAGAGCTTCATTTCCCTTGGAGTTGACTACAAGGA
rJMSF044G21+ ATGTGGCTGATACACTTGATTCTCGCAGAGCTTCATTTCCCTTGGAGTTGACTACAAGGA
rJMSF015O18+ ATGTGGCTGATACACTTGATTCTCGCAGAGCTTCATTTCCCTTGGAGTTGACTACAAGGA
                      ____________________________________________________________
consensus ATGTGGCTGATACACTTGATTCTCGCAGAGCTTCATTTCCCTTGGAGTTGACTACAAGGA
 
. : . : . : . : . : . :
rJMSF051G18+ AATCTATAAAGACACCTACAGAAAACATGGGATTTGGGAGGAATATCTCAAAGAAATCTC
rJMSF044G21+ AATCTATAAAGACACCTACAGAAAACATGGGATTTGGGAGGAATATCTCAAAGAAATCTC
rJMSF015O18+ AATCTATAAAGACACCTACAGAAAACATGGGATTTGGGAGGAATATCTCAAAGAAATCTC
                      ____________________________________________________________
consensus AATCTATAAAGACACCTACAGAAAACATGGGATTTGGGAGGAATATCTCAAAGAAATCTC
 
. : . : . : . : . : . :
rJMSF051G18+ TTGATATGGCTATCAAACACATGGATATAAGAAATGGCCCTAATGGTGCTCGCCCACTTT
rJMSF044G21+ TTGATATGGCTATCAAACACATGGATATAAGAAATGGCCCTAATGGTGCTCGCCCACTTT
rJMSF015O18+ TTGATATGGCTATCAAACACATGGATATAAGAAATGGCCCTAATGGTGCTCGCCCACTTT
                      ____________________________________________________________
consensus TTGATATGGCTATCAAACACATGGATATAAGAAATGGCCCTAATGGTGCTCGCCCACTTT
 
. : . : . : . : . : . :
rJMSF051G18+ CAGGCTCAATCCGTTACCCTCACAGCATTCGATCAAATGGTGTTAAAAGCCATAGTCACA
rJMSF044G21+ CAGGCTCAATCCGTTACCCTCACAGCATTCGATCAAATGGTGTTAAAAGCCATAGTCACA
rJMSF015O18+ CAGGCTCAATCCGTTACCCTCACAGCATTCGATCAAATGGTGTTAAAAGCCATAGTCACA
                      ____________________________________________________________
consensus CAGGCTCAATCCGTTACCCTCACAGCATTCGATCAAATGGTGTTAAAAGCCATAGTCACA
 
. : . : . : . : . : . :
rJMSF051G18+ GTGCAAGTTCCCCAGCATCTCTGAATGGGAATATGAACTTCAGCAACAATGGCCCTACAT
rJMSF044G21+ GTGCAAGTTCCCCAGCATCTCTGAATGGGAATATGAACTTCAGCAACAATGGCCCTACAT
rJMSF015O18+ GTGCAAGTTCCCCAGCATCTCTGAATGGGAATATGAACTTCAGCAACAATGGCCCTACAT
                      ____________________________________________________________
consensus GTGCAAGTTCCCCAGCATCTCTGAATGGGAATATGAACTTCAGCAACAATGGCCCTACAT
 
. : . : . : . : . : . :
rJMSF051G18+ CTGAAAATGGAAGTTATCTTAGTAGGTCTTCTGAAAATGGGAGTGAAGACGACAGATCTC
rJMSF044G21+ CTGAAAATGGAAGTTATCTTAGTAGGTCTTCTGAAAATGGGAGTGAAGACGACAGATCTC
rJMSF015O18+ CTGAAAATGGAAGTTATCTTAGTAGGTCTTCTGAAAATGGGAGTGAAGACGACAGATCTC
                      ____________________________________________________________
consensus CTGAAAATGGAAGTTATCTTAGTAGGTCTTCTGAAAATGGGAGTGAAGACGACAGATCTC
 
. : . : . : . : . : . :
rJMSF051G18+ GATTCTCAGCAAGATTGACAGATACTGACATCTATGAGAGTTGTCGTTACGACATGATTC
rJMSF044G21+ GATTCTCAGCAAGATTGACAGATACTGACATCTATGAGAGTTGTCGTTACGACATGATTC
rJMSF015O18+ GATTCTCAGCAAGATTGACAGATACTGACATCTATGAGAGTTGTCGTTACGACATGATTC
                      ____________________________________________________________
consensus GATTCTCAGCAAGATTGACAGATACTGACATCTATGAGAGTTGTCGTTACGACATGATTC
 
. : . : . : . : . : . :
rJMSF051G18+ TACTCAAAGAGGATGTCAAGAACACTAACTGGCTGCACAGCATTGACGATAAGCTTGATA
rJMSF044G21+ TACTCAAAGAGGATGTCAAGAACACTAACTGGCTGCACAGCATTGACGATAAGCTTGATA
rJMSF015O18+ TACTCAAAGAGGATGTCAAGAACACTAACTGGCTGCACAGCATTGACGATAAGCTTGATA
                      ____________________________________________________________
consensus TACTCAAAGAGGATGTCAAGAACACTAACTGGCTGCACAGCATTGACGATAAGCTTGATA
 
. : . : . : . : . : . :
rJMSF051G18+ GTACCATTTTTGAGAACGGATTCGAACCTCTCCCTGAACCTTTCGACCATTTGTAACATA
rJMSF044G21+ GTACCATTTTTGAGAACGGATTCGAACCTCTCCCTGAACCTTTCGACCATTTGTAACATA
rJMSF015O18+ GTACCATTTTTGAGAACGGATTCGAACCTCTCCCTGAACCTTTCGACCATTTGTAACATA
                      ____________________________________________________________
consensus GTACCATTTTTGAGAACGGATTCGAACCTCTCCCTGAACCTTTCGACCATTTGTAACATA
 
. : . : . : . : . : . :
rJMSF051G18+ AGTTCATTGGTGCTCCATGCATTATTTTTTATATTTATTNATCTATTTTTCAAATTTTGA
rJMSF044G21+ AGTTCATTGGTGCTCCATGCATTATTTTTTATATTTATTTATCTATTTTTCAAATTTTGA
rJMSF015O18+ AGTTCATTGGTGCTCCATGCATTATTTTTTATATTTATTTATCTATTTTTCAAATTTTGA
                      ____________________________________________________________
consensus AGTTCATTGGTGCTCCATGCATTATTTTTTATATTTATTTATCTATTTTTCAAATTTTGA
 
. : . : . : . : . : . :
rJMSF051G18+ TTTGCTGCCTGAACACATAAA
rJMSF044G21+ TTTGCTGCCTGAACACATAAATGAAAATTAAATGTGT
rJMSF015O18+ TTTGCTGCCTGAACACATAAATGAAAATTAAATGTGTTAAGTTTGAAGCATATAGAATAT
                      ____________________________________________________________
consensus TTTGCTGCCTGAACACATAAATGAAAATTAAATGTGTTAAGTTTGAAGCATATAGAATAT