Contig 012563:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025J19+                                                     AATGTTTGGAGTTTTGG
                      ____________________________________________________________
consensus                                                        AATGTTTGGAGTTTTGG
 
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rJMSF025J19+          GATTGTACTTCTCGAGTTGCTCACTGGCAGGAAGAATTTGGACAGTGGTCATCCAAAGGA
rJMSF015J08+                     TCGAGTTGCTCACTGGCAGGAAGAATTTGGACAGTGGTCATCCAAAGGA
                      ____________________________________________________________
consensus             GATTGTACTTCTCGAGTTGCTCACTGGCAGGAAGAATTTGGACAGTGGTCATCCAAAGGA
 
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rJMSF025J19+          AGAAGGGAATTTAGTGAAGTGGAGCCAGCCTTTTCTGGCCGACGATTGCAGGCTATCGCT
rJMSF015J08+          AGAAAGGAATTTAGTGAAGTGGAGCCAGCCTTTTCTGGCCGACGATTGCAGGCTATCGCT
                      ____________________________________________________________
consensus             AGAAGGGAATTTAGTGAAGTGGAGCCAGCCTTTTCTGGCCGACGATTGCAGGCTATCGCT
 
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rJMSF025J19+          TATCATGGACCCTCAGCTGAAAGGTCGGTTCCCAGCCAAAGCAGCTAGGACGATAGCCGA
rJMSF015J08+          TATCATGGACCCTCAGCTGAAAGGTCGGTTCCCAGCCAAAGCAGCTAGGACGATAGCCGA
                      ____________________________________________________________
consensus             TATCATGGACCCTCAGCTGAAAGGTCGGTTCCCAGCCAAAGCAGCTAGGACGATAGCCGA
 
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rJMSF025J19+          TATTGCTCAACGATGTTTGCAAAAGGACCCCTCCGGGAGGCCAACGATGAGAACTATAGT
rJMSF015J08+          TATTGCTCAACGATGTTTGCAAAAGGACCCCTCCGGGAGGCCAACGATGAGAACTATAGT
                      ____________________________________________________________
consensus             TATTGCTCAACGATGTTTGCAAAAGGACCCCTCCGGGAGGCCAACGATGAGAACTATAGT
 
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rJMSF025J19+          GGAGCAGCTCAAGACGGCACAAGACATGAAGTGCCCGTCTCGATTTCCACTTCAGGAGCC
rJMSF015J08+          GGAGCAGCTCAAGACGGCACAAGACATGAAGTGCCCGTCTCGATTTCCACTTCAGGAGCC
                      ____________________________________________________________
consensus             GGAGCAGCTCAAGACGGCACAAGACATGAAGTGCCCGTCTCGATTTCCACTTCAGGAGCC
 
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rJMSF025J19+          AGGAAGAGTAAGCATGAAGCACATGTCGAAATCACCTAGTCTAAACGGGATTGTCGTCCC
rJMSF015J08+          AGGAAGAGTAAGCATGAAGCACATGTCGAAATCACCTAGTCTAAACGGGATTGTCGTCCC
                      ____________________________________________________________
consensus             AGGAAGAGTAAGCATGAAGCACATGTCGAAATCACCTAGTCTAAACGGGATTGTCGTCCC
 
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rJMSF025J19+          CGCCCCAAAGCTAGGTCTTTCGCCTTCGCCACCAACAAGCAGACTATCAAGGACAGGTGC
rJMSF015J08+          CGCCCCAAAGCTAGGTCTTTCGCCTTCGCCACCAACAAGCAGACTATCAAGGACAGGTGC
                      ____________________________________________________________
consensus             CGCCCCAAAGCTAGGTCTTTCGCCTTCGCCACCAACAAGCAGACTATCAAGGACAGGTGC
 
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rJMSF025J19+          ACCGCGTTTGTCCCTTCCTTCTCGAACATGCTCCTCCATCTCAATGGAAGACCTGGAGCG
rJMSF015J08+          ACCGCGTTTGTTCCTTCCTTCTCGAACATGCTCCTCCATCTCAATGGAAGACCTGGAGCG
                      ____________________________________________________________
consensus             ACCGCGTTTGTTCCTTCCTTCTCGAACATGCTCCTCCATCTCAATGGAAGACCTGGAGCG
 
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rJMSF025J19+          ACTGGAGAGCCGGAGATCGTCGTCTTCATATCTCCGAAGAACTAGTGTTGAAGGTTTTTG
rJMSF015J08+          ACTGGAGAGCCGGAGATCGTCGTCTTCATATCTCCGAAGAACTAGTGTTGAAGGTTTTTG
                      ____________________________________________________________
consensus             ACTGGAGAGCCGGAGATCGTCGTCTTCATATCTCCGAAGAACTAGTGTTGAAGGTTTTTG
 
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rJMSF025J19+          ATTGTTCATAGAGAGTGATCCATAGAGAACATATTTTTGTTTTTAGGCTTTGCTTTCCCT
rJMSF015J08+          ATTGTTCATAGAGAGTGATCCATAGAGAACATATTTTTGTTTTTAGGCTTTGCTTTCCCT
                      ____________________________________________________________
consensus             ATTGTTCATAGAGAGTGATCCATAGAGAACATATTTTTGTTTTTAGGCTTTGCTTTCCCT
 
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rJMSF025J19+          TCTTGGAAAGTGATTTTAAATGAAGTATAGAAGATAAAAAGATGTGGTTTCTCCACCATG
rJMSF015J08+          TCTTGGAAAGTGATTTTAAATGAAGTATAGAAGATAAAAAGATGTGGTTTCTCCACCATG
                      ____________________________________________________________
consensus             TCTTGGAAAGTGATTTTAAATGAAGTATAGAAGATAAAAAGATGTGGTTTCTCCACCATG
 
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rJMSF025J19+          CCATTCTCCTTGTAAGAAATCATGGGGAATGACATTATGTAGATATGTTT          
rJMSF015J08+          CCATTCTCCTTGTAAGAAATCATGGGGAATGACATTATGTAGATATGTTTTCCCCTTAGT
                      ____________________________________________________________
consensus             CCATTCTCCTTGTAAGAAATCATGGGGAATGACATTATGTAGATATGTTTTCCCCTTAGT
 
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rJMSF015J08+          TTTCCCTTTTAAGGATGGGATATAGTTTCTCTTCTTGGTTGGTACACTCCATTGTGTGTG
                      ____________________________________________________________
consensus             TTTCCCTTTTAAGGATGGGATATAGTTTCTCTTCTTGGTTGGTACACTCCATTGTGTGTG