Contig 012561:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067G07Sequence618012561 (2)ref|XP_004231631.1|2e-22PREDICTED: cationic amino acid transporter 4, vacuolar-like [Solanum lycopersic
JMSF015I10Sequence528023165ref|XP_009791609.1|2e-62PREDICTED: cationic amino acid transporter 4, vacuolar-like [Nicotiana sylvestr760012561 (2)ref|XP_010653196.1|3e-59PREDICTED: cationic amino acid transporter 2, vacuolar isoform X2 [Vitis vinife

Alignment

This contig is upended


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JMFS067G07+                                 AATGAAAAGCAAATTCAAAATGTTNTGAGGATCTCTTA
                      ____________________________________________________________
consensus                                   AATGAAAAGCAAATTCAAAATGTTNTGAGGATCTCTTA
 
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JMFS067G07+           ATAGCCAGCTTTGTACACAGCTAATACTCATACACTATAGATATGTATTAGCTATACAAC
                      ____________________________________________________________
consensus             ATAGCCAGCTTTGTACACAGCTAATACTCATACACTATAGATATGTATTAGCTATACAAC
 
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JMFS067G07+           ATATACACTATAGATATGCACCTTCTCATCATTCTTAAACCACAACACTGCATCTATCAT
                      ____________________________________________________________
consensus             ATATACACTATAGATATGCACCTTCTCATCATTCTTAAACCACAACACTGCATCTATCAT
 
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JMFS067G07+           TCTGCTGTGCAGCATATCTGTGCATATGGGAAGGAGCTACAACAATAATGTCTGAAATAA
                      ____________________________________________________________
consensus             TCTGCTGTGCAGCATATCTGTGCATATGGGAAGGAGCTACAACAATAATGTCTGAAATAA
 
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JMFS067G07+           TGTTAAGGCTTCAAAAGACGACAATGCATATATATCATGATACCTCGGAATGGGAATGAT
rJMSF015I10-                                                     CTCGGAATGGGAATGAT
                      ____________________________________________________________
consensus             TGTTAAGGCTTCAAAAGACGACAATGCATATATATCATGATACCTCGGAATGGGAATGAT
 
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JMFS067G07+           CACGCGATTGCAGTAGGCTATGAGTTCGTCCGTAGAATGAATATATCAACGCTCCAGCTG
rJMSF015I10-          CACGCGATTGCAGTAGGCTATGAGTTCGTCCGTAGAATGAATATATCAACGCTCCAGCTG
                      ____________________________________________________________
consensus             CACGCGATTGCAGTAGGCTATGAGTTCGTCCGTAGAATGAATATATCAACGCTCCAGCTG
 
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JMFS067G07+           CCAACCATAGTAAAACATAAATCCAAGTCTCGGCCCCGATGTTTATCAGCAAATATGTGT
rJMSF015I10-          CCAACCATAGTAAAACATAAATCCAAGTCTCGGCCCCGATGTTTATCAGCAAATATGTGT
                      ____________________________________________________________
consensus             CCAACCATAGTAAAACATAAATCCAAGTCTCGGCCCCGATGTTTATCAGCAAATATGTGT
 
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JMFS067G07+           TCACGAGTATGCTGGCGATGGGGAGAAATGGAACGAATGGGCAGAGAAAACCTTACCTCC
rJMSF015I10-          TCACGAGTATGCTGGCGATGGGGAGAAATGGAACGAATGGGCAGAGAAA-----ACCTCC
                      ____________________________________________________________
consensus             TCACGAGTATGCTGGCGATGGGGAGAAATGGAACGAATGGGCAGAGAAAACCTTACCTCC
 
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JMFS067G07+           TGATTTCTTGAATCTCCGCCTCAGATCAGCTTGATCTACACAGGCGAGGACTGTCGAGCA
rJMSF015I10-          TGATTTCTTGAATCTCCGCCTCAGATCAGCTTGATCTACACAGGCGAGGACTGTCGAGCA
                      ____________________________________________________________
consensus             TGATTTCTTGAATCTCCGCCTCAGATCAGCTTGATCTACACAGGCGAGGACTGTCGAGCA
 
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JMFS067G07+           GCATAACACAATCATGCCA                                         
rJMSF015I10-          GCATAACACAATCATGCCACCAACTCCACAAACTAGAAAGCGGGGAATGCTGGAAAGACC
                      ____________________________________________________________
consensus             GCATAACACAATCATGCCACCAACTCCACAAACTAGAAAGCGGGGAATGCTGGAAAGACC
 
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rJMSF015I10-          CTCAGCTGAAGCAGCAGATACGAACAGAAGGATCCCTACGCATACTAGAGTGATAGCCCA
                      ____________________________________________________________
consensus             CTCAGCTGAAGCAGCAGATACGAACAGAAGGATCCCTACGCATACTAGAGTGATAGCCCA
 
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rJMSF015I10-          AGCAGCAATTTTTCGTCTCCTGAGTTCATTGCAGGCATCTTGGGTTGTCTCTTTTGGAAG
                      ____________________________________________________________
consensus             AGCAGCAATTTTTCGTCTCCTGAGTTCATTGCAGGCATCTTGGGTTGTCTCTTTTGGAAG
 
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rJMSF015I10-          AAGAGGACATTCAACCACAGGGTGAAGATGTTCACTGTTACTATAAGGCATGCTTATGGA
                      ____________________________________________________________
consensus             AAGAGGACATTCAACCACAGGGTGAAGATGTTCACTGTTACTATAAGGCATGCTTATGGA
 
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rJMSF015I10-          TTTAGTGTTTTCATCCCCAATTCGCAGAGCTTTACTATGTTGTGTGAATGATGCAGGAGT
                      ____________________________________________________________
consensus             TTTAGTGTTTTCATCCCCAATTCGCAGAGCTTTACTATGTTGTGTGAATGATGCAGGAGT
 
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rJMSF015I10-          TATGGATGGCTGGAGCAATGATGGGAAAGAGAACTCATCTGGAGGAACGTATCTGACTAC
                      ____________________________________________________________
consensus             TATGGATGGCTGGAGCAATGATGGGAAAGAGAACTCATCTGGAGGAACGTATCTGACTAC