Contig 012559:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015F05Sequence582009320 (6)ref|XP_011073424.1|1e-29PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloropla771012559 (2)ref|XP_011073424.1|1e-35PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloropla
JMSF022H06Sequence648009320 (6)ref|XP_011073424.1|2e-29PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloropla757012559 (2)ref|XP_011073424.1|1e-35PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloropla

Alignment

This contig is upended


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rJMSF022H06+                               TAACAAATAAAGTATACTATTCTAACACATAAAGTACAT
                      ____________________________________________________________
consensus                                  TAACAAATAAAGTATACTATTCTAACACATAAAGTACAT
 
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rJMSF022H06+          TATTATTCTAACTCATAAAATACATTATTTAACAATAAAATGTTCATTATTCTAACACGA
rJMSF015F05+                   AACTCATAAAATACATTATTTACCAATAAAATGTTCATTATTCTAACACGA
                      ____________________________________________________________
consensus             TATTATTCTAACTCATAAAATACATTATTTACCAATAAAATGTTCATTATTCTAACACGA
 
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rJMSF022H06+          GCACGGAACAAGTAATTTTTTAAAAATCAAAACAACGTCGTTTTGCTCCTATAGTCCACA
rJMSF015F05+          GCACGGAACAAGTAATTTTTTAAAAATCAAAACAACGTCGTTTTGCTCCTATAGTCCACA
                      ____________________________________________________________
consensus             GCACGGAACAAGTAATTTTTTAAAAATCAAAACAACGTCGTTTTGCTCCTATAGTCCACA
 
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rJMSF022H06+          CAATAATTTGCCTGATTGATTGGTGGATAATTTACTTTTTTAAAATGTTATTAATATTCT
rJMSF015F05+          CAATAATTTGCCTGATTGATTGGTGGATAATTTACTTTTTTAAAATGTTATTAATATTCT
                      ____________________________________________________________
consensus             CAATAATTTGCCTGATTGATTGGTGGATAATTTACTTTTTTAAAATGTTATTAATATTCT
 
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rJMSF022H06+          TCTTCCCAGGTAGTAAGAATTGTATTTCTTTCACACGTAACATATTTAGTGAATTCTGTG
rJMSF015F05+          TCTTCCCAGGTAGTAAGAATTGTATTTCTTTCACACGTAACATATTTAGTGAATTCTGTG
                      ____________________________________________________________
consensus             TCTTCCCAGGTAGTAAGAATTGTATTTCTTTCACACGTAACATATTTAGTGAATTCTGTG
 
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rJMSF022H06+          TGTCACCTATGGGGAAATCAAGCATGGAATACTGGTGATCAATCTAGAAATAATTGGTAT
rJMSF015F05+          TGTCACCTATGGGGAAATCAAGCATGGAATACTGGTGATCAATCTAGAAATAATTGGTAT
                      ____________________________________________________________
consensus             TGTCACCTATGGGGAAATCAAGCATGGAATACTGGTGATCAATCTAGAAATAATTGGTAT
 
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rJMSF022H06+          GCTAAAATCTTTAATGTCTTACCATTTTTTTTTATAGTCATTTCCTATGTATTCATACTA
rJMSF015F05+          GCTAAAATCTTTAATGTCTTACCATTTTTTTTTATAGTCATTTCCTATGTATTCATACTA
                      ____________________________________________________________
consensus             GCTAAAATCTTTAATGTCTTACCATTTTTTTTTATAGTCATTTCCTATGTATTCATACTA
 
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rJMSF022H06+          TTTAATTTAATATAATCCTATGAAGTTTGGAAATAAACTTTTGTCAGGTTATTGGCATTG
rJMSF015F05+          TTTAATTTAATATAATCCTATGAAGTTTGGAAATAAACTTTTGTCAGGTTATTGGCATTG
                      ____________________________________________________________
consensus             TTTAATTTAATATAATCCTATGAAGTTTGGAAATAAACTTTTGTCAGGTTATTGGCATTG
 
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rJMSF022H06+          CCTTCACTTGGAGATAGTTGGCATAACAATCACCATGCCTTTGAGTATTCAGCTCGACAT
rJMSF015F05+          CCTTCACTTGGAGATAGTTGGCATAACAATCACCATGCCTTTGAGTATTCAGCTCGACAT
                      ____________________________________________________________
consensus             CCTTCACTTGGAGATAGTTGGCATAACAATCACCATGCCTTTGAGTATTCAGCTCGACAT
 
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rJMSF022H06+          GGCCTAGAATGGTGGCAACTTGACATAACTTGGTATGTTGTGAGGGCACTACAAGTTTTT
rJMSF015F05+          GGCCTAGAATGGTGGCAACTTGACATAACTTGGTATGTTGTGAGGGCACTACAAGTTTTT
                      ____________________________________________________________
consensus             GGCCTAGAATGGTGGCAACTTGACATAACTTGGTATGTTGTGAGGGCACTACAAGTTTTT
 
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rJMSF022H06+          GGTTTAGCAACTGATGTTAAGTTGCCTACTCATGCTCAAAAGAGAAAGATGACTTCAACT
rJMSF015F05+          GGTTTAGCAACTGATGTTAAGTTGCCTACTCATGCTCAAAAGAGAAAGATGACTTCAACT
                      ____________________________________________________________
consensus             GGTTTAGCAACTGATGTTAAGTTGCCTACTCATGCTCAAAAGAGAAAGATGACTTCAACT
 
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rJMSF022H06+          ACAACTTAATATATGCTTTTGACTTGAATTGAAAGCACGTAGACAACCTGAAATATATAT
rJMSF015F05+          ACAACTTAATATATGCTTTTGACTTGAATTGAAAGCACGTAGACAACCTGAAATATATAT
                      ____________________________________________________________
consensus             ACAACTTAATATATGCTTTTGACTTGAATTGAAAGCACGTAGACAACCTGAAATATATAT
 
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rJMSF022H06+          GCATGGAATATGAAATGTGAGGAATGCAATGTTATGTGTAATT                 
rJMSF015F05+          GCATGGAATATGAAATGTGAGGAATGCAATGTTATGTGTAATTTGTAATTATTGTTGTTG
                      ____________________________________________________________
consensus             GCATGGAATATGAAATGTGAGGAATGCAATGTTATGTGTAATTTGTAATTATTGTTGTTG
 
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rJMSF015F05+          TTTTAATTTGATATAATAATTGTTATGGAAACTTAAAATTGTACGTGTAAAAACTAAAAT
                      ____________________________________________________________
consensus             TTTTAATTTGATATAATAATTGTTATGGAAACTTAAAATTGTACGTGTAAAAACTAAAAT