Contig 012549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS115G04Sequence487012549 (3)ref|XP_009769216.1|4e-26PREDICTED: receptor-like protein kinase HAIKU2 [Nicotiana sylvestris]
JMSF011L03Sequence367006736 (8)gb|EYU36421.1|1e-22hypothetical protein MIMGU_mgv1a000813mg [Erythranthe guttata]737012549 (3)gb|KDP41542.1|1e-74hypothetical protein JCGZ_15949 [Jatropha curcas]
JMSF050A22Sequence615006736 (8)ref|XP_011074301.1|5e-58PREDICTED: receptor-like protein kinase HAIKU2 [Sesamum indicum]725012549 (3)ref|XP_009769216.1|1e-70PREDICTED: receptor-like protein kinase HAIKU2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF050A22+              TGCGACCGCCCCATCATCCACCGGGATGTCAAGTCCAGTAATATCTTATTGGACGA
                      ____________________________________________________________
consensus                 TGCGACCGCCCCATCATCCACCGGGATGTCAAGTCCAGTAATATCTTATTGGACGA
 
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rJMSF050A22+          GTTTTTCAAGCCCAGAATTGCAGATTTTGGTCTGGCAAAGATTCTCCAATATAACAGCTC
                      ____________________________________________________________
consensus             GTTTTTCAAGCCCAGAATTGCAGATTTTGGTCTGGCAAAGATTCTCCAATATAACAGCTC
 
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rJMSF050A22+          TTGTAAAGACACCACTCATGTCATTCCAGGAACTCATGGATACATCGCTCCAGGTACAAA
                      ____________________________________________________________
consensus             TTGTAAAGACACCACTCATGTCATTCCAGGAACTCATGGATACATCGCTCCAGGTACAAA
 
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rJMSF050A22+          ACATTTCAAGTTTTATTATAAGCTTTGTCTAAATTTATGCAATTGTTTTATTAAGCAAGC
                      ____________________________________________________________
consensus             ACATTTCAAGTTTTATTATAAGCTTTGTCTAAATTTATGCAATTGTTTTATTAAGCAAGC
 
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rJMSF050A22+          ATGCATGCATGACGATTATCGTGACCTATCAAACTCGTTGCAGAATACGGATACACGCAA
rJMSF011L03+                                                  CAGAATACGGATACACGCAA
                      ____________________________________________________________
consensus             ATGCATGCATGACGATTATCGTGACCTATCAAACTCGTTGCAGAATACGGATACACGCAA
 
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rJMSF050A22+          AAGGTGAAGGAAAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTGATGGAGCTGGTGTCG
rJMSF011L03+          AAGGTGAAGGAAAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTGATGGAGCTGGTGTCG
                      ____________________________________________________________
consensus             AAGGTGAAGGAAAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTGATGGAGCTGGTGTCG
 
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rJMSF050A22+          GGGAAGAAGCCAATCGAGGCAGAATACGGAGAGAACAACGACATTGTGAGCTGGGTGAGC
JMFS115G04-                                                                GGTGAGC
rJMSF011L03+          GGGAAGAAGCCAATCGAGGCAGAATACGGAGAGAACAACGACATTGTGAGCTGGGTGAGC
                      ____________________________________________________________
consensus             GGGAAGAAGCCAATCGAGGCAGAATACGGAGAGAACAACGACATTGTGAGCTGGGTGAGC
 
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rJMSF050A22+          ACGAAGTTGAAGAGCAAAGAGAGCATATTGAGCATGGTTGATTCAGCCATCCAAGAGCCA
JMFS115G04-           ACGAAGTTGAAGAGCAAAGAGAGCATATTGAGCATGGTTGATTCAGCCATCCAAGAGCCA
rJMSF011L03+          ACGAAGTTGAAGAGCAAAGAGAGCATATTGAGCATGGTTGATTCAGCCATCCAAGAGCCA
                      ____________________________________________________________
consensus             ACGAAGTTGAAGAGCAAAGAGAGCATATTGAGCATGGTTGATTCAGCCATCCAAGAGCCA
 
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rJMSF050A22+          TTTAAGGAAGATGCAATTAAGGTTTTGAGGATAGCAATTTTGTGCACTGCTGCCCTCCCA
JMFS115G04-           TTTAAGGAAGATGCAATTAAGGTTTTGAGGATAGCAATTTTGTGCACTGCTGCCCTCCCA
rJMSF011L03+          TTTAAGGAAGATGCAATTAAGGTTTTGAGGATAGCAATTTTGTGCACTGCTGCCCTCCCA
                      ____________________________________________________________
consensus             TTTAAGGAAGATGCAATTAAGGTTTTGAGGATAGCAATTTTGTGCACTGCTGCCCTCCCA
 
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rJMSF050A22+          AATTCAAGGCCAACCATGAGGAGAGTGGTTCAAATGTTGGAGGATGCTGAGCCTTGCAAA
JMFS115G04-           AATTCAAGGCCAACCATGAGGAGAGTGGTTCAAATGTTGGAGGATGCTGAGCCTTGCAAA
rJMSF011L03+          AATTCAAGGCCAACCATGAGGAGAGTGGTTCAAATGTTGGAGGATGCTGAGCCTTGCAAA
                      ____________________________________________________________
consensus             AATTCAAGGCCAACCATGAGGAGAGTGGTTCAAATGTTGGAGGATGCTGAGCCTTGCAAA
 
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rJMSF050A22+          TTGGTAAGCATCATTGTCTCCAAAGATGCTGCTAAACTTGACAACCCATCAGACAACACC
JMFS115G04-           TTGGTAAGCATCATTGTCTCCAAAGATGCTGCTAAACTTGACAACCCATCAGACAACACC
rJMSF011L03+          TTGGTAAGCATCATTGTCTCCAAAGATGCTGCTAAACTTGACAACCCATCAGACAACACC
                      ____________________________________________________________
consensus             TTGGTAAGCATCATTGTCTCCAAAGATGCTGCTAAACTTGACAACCCATCAGACAACACC
 
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rJMSF050A22+          TCAAAGATGTAACCTTAAAACTAGTTTCTATTGGATTGTAAGCCTCT             
JMFS115G04-           TCAAAGATGTAACCTTAAAACTAGTTTCTATTGGATTGTAAGCCTCTCAAGGATCATGTA
rJMSF011L03+          TCAAAGATGTAACCTTAAAACTAGTTTCTATTGGATTGTAAGCCTCTCAAGGATCATGTA
                      ____________________________________________________________
consensus             TCAAAGATGTAACCTTAAAACTAGTTTCTATTGGATTGTAAGCCTCTCAAGGATCATGTA
 
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JMFS115G04-           CAAAGGTTGTAGTGTAATATAAACATATATAATGTAACCCAAAGGGGAAGTTCAAGTGGC
rJMSF011L03+          CAAAGGTTGTAGTGTAATATAAACATATATAATGTAACCCAAAGGGGAAGTTCAAGTGGC
                      ____________________________________________________________
consensus             CAAAGGTTGTAGTGTAATATAAACATATATAATGTAACCCAAAGGGGAAGTTCAAGTGGC
 
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JMFS115G04-           AAACGAGCTTCTTTGTGAGGACGACCGTAGAGATAACTCGCCAAGTGACAATTCCCCTTG
rJMSF011L03+          AAACGAGCTTCTTTGTGAGGACGACCGTAGAGATAACTCGCCAAGTGACAATTCCCCTTG
                      ____________________________________________________________
consensus             AAACGAGCTTCTTTGTGAGGACGACCGTAGAGATAACTCGCCAAGTGACAATTCCCCTTG
 
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JMFS115G04-           GGCCAGCTTTCACGGCCCCCGTAGCGAACATGATGTATAAATCTTGATTC          
rJMSF011L03+          GGCCAGCTTTCACGGCCCCCGTAGCGAACATGATGTATAAATCTTGATTCAAAAATAATG
                      ____________________________________________________________
consensus             GGCCAGCTTTCACGGCCCCCGTAGCGAACATGATGTATAAATCTTGATTCAAAAATAATG