Contig 012548:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019A22+                                               CTACTATGGGGGGATGATTGCAT
rJMSF011J01+                                                                TTGCAT
                      ____________________________________________________________
consensus                                                  CTACTATGGGGGGATGATTGCAT
 
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rJMSF019A22+          TGGACAGNAGCCATTTCGTAAAGCTTTGGAGCTTTTGCAAAATGTTGTTACAGCACCTAT
rJMSF011J01+          TGGACAGAAGCAATTTCGTAAAGCTTTGGAGC-TTTGCAAAATGTGG-TACAGCACCTAT
                      ____________________________________________________________
consensus             TGGACAGAAGCCATTTCGTAAAGCTTTGGAGCTTTTGCAAAATGTTGTTACAGCACCTAT
 
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rJMSF019A22+          GTCCACTTTAAATGCTATTGCTGTTGAAGCATACAAGAAGTACATACTGGTTTCACTCAT
rJMSF011J01+          GTCCACTTTAAATGCTATTGCTGTTGAAGCATACAAGAAGTACATACTGGTTTCACTCAT
                      ____________________________________________________________
consensus             GTCCACTTTAAATGCTATTGCTGTTGAAGCATACAAGAAGTACATACTGGTTTCACTCAT
 
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rJMSF019A22+          TCACCTTGGGCAGTTCTCTACCAGTTTTCCAAAGTACACATCTTCTGTGGCTCAAAGGAA
rJMSF011J01+          TCACCTTGGGCAGTTCTCTACCAGTTTTCCAAAGTACACATCTTCTGTGGCTCAAAGGAA
                      ____________________________________________________________
consensus             TCACCTTGGGCAGTTCTCTACCAGTTTTCCAAAGTACACATCTTCTGTGGCTCAAAGGAA
 
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rJMSF019A22+          CCTAAAGAACTACTCTCAGGCATACTTGGAGTTGGCAAATAGTTATAGCACTGGGAAAAT
rJMSF011J01+          CCTAAAGAACTACTCTCAGGCATACTTGGAGTTGGCAAATAGTTATAGCACTGGGAAAAT
                      ____________________________________________________________
consensus             CCTAAAGAACTACTCTCAGGCATACTTGGAGTTGGCAAATAGTTATAGCACTGGGAAAAT
 
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rJMSF019A22+          TTCTGAACTTGAGACATGTGTACAGACACACAAGGACAAGTATCAAAGTGACAATAACCT
rJMSF011J01+          TTCTGAACTTGAGACATGTGTACAGACACACAAGGACAAGTATCAAAGTGACAATAACCT
                      ____________________________________________________________
consensus             TTCTGAACTTGAGACATGTGTACAGACACACAAGGACAAGTATCAAAGTGACAATAACCT
 
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rJMSF019A22+          TGGAATTGTCCAGCAAGTTGTGTCATCCATGTATAAACGCAATATTCAGAGATTGACTCA
rJMSF011J01+          TGGAATTGTCCAGCAAGTTGTGTCATCCATGTATAAACGCAATATTCAGAGATTGACTCA
                      ____________________________________________________________
consensus             TGGAATTGTCCAGCAAGTTGTGTCATCCATGTATAAACGCAATATTCAGAGATTGACTCA
 
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rJMSF019A22+          AACATACCTCACCCTTTCCCTCCAAGACATTGCTATCACGGTCCAACTAAGTAGTCCGAA
rJMSF011J01+          AACATACCTCACCCTTTCCCTCCAAGACATTGCTATCACGGTCCAACTAAGTAGTCCGAA
                      ____________________________________________________________
consensus             AACATACCTCACCCTTTCCCTCCAAGACATTGCTATCACGGTCCAACTAAGTAGTCCGAA
 
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rJMSF019A22+          GGAGGCTGAAATGCACGTGCTTCAAATGATCGAAGATGGTGAGATTTATGCAAATATCAA
rJMSF011J01+          GGAGGCTGAAATGCACGTGCTTCAAATGATCGAAGATGGTGAGATTTATGCAAATATCAA
                      ____________________________________________________________
consensus             GGAGGCTGAAATGCACGTGCTTCAAATGATCGAAGATGGTGAGATTTATGCAAATATCAA
 
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rJMSF019A22+          CCAGAAGGATGGAATGGTTAGATTTCTGGAGGATCCTGAGCAATACAAGACTTGTGAAAT
rJMSF011J01+          CCAGAAGGATGGAATGGTTAGATTTCTGGAGGATCCTGAGCAATACAAGACTTGTGAAAT
                      ____________________________________________________________
consensus             CCAGAAGGATGGAATGGTTAGATTTCTGGAGGATCCTGAGCAATACAAGACTTGTGAAAT
 
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rJMSF019A22+          GATTGAACATATAGATTCATCAATACAGAGAATAATGATGTTGTCAAAGAAACTGAATGA
rJMSF011J01+          GATTGAACATATAGATTCATCAATACAGAGAATAATGATGTTGTCAAAGAAACTGAATGA
                      ____________________________________________________________
consensus             GATTGAACATATAGATTCATCAATACAGAGAATAATGATGTTGTCAAAGAAACTGAATGA
 
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rJMSF019A22+          TATGGATGAACGCATGTCATATGACCCTTCTTACCTTGCAAAGGTTGGCAAAGAGAAACA
rJMSF011J01+          TATGGATGAACGCATGTCATATGACCCTTCTTACCTTGCAAAGGTTGGCAAAGAGAAACA
                      ____________________________________________________________
consensus             TATGGATGAACGCATGTCATATGACCCTTCTTACCTTGCAAAGGTTGGCAAAGAGAAACA
 
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rJMSF019A22+          GAGATTTGATTTTGATGATTTTGA                                    
rJMSF011J01+          GAGATTTGATTTTGATGATTTTGAAGGAGTTGCCCCAAAGTTTAATTTATGAGGTTCCAC
                      ____________________________________________________________
consensus             GAGATTTGATTTTGATGATTTTGAAGGAGTTGCCCCAAAGTTTAATTTATGAGGTTCCAC
 
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rJMSF011J01+          AATCTTGCATTTCTCTTGTAGAATATGTGAAATATGTTCATAAATCGCATAGGTAAAATT
                      ____________________________________________________________
consensus             AATCTTGCATTTCTCTTGTAGAATATGTGAAATATGTTCATAAATCGCATAGGTAAAATT