Contig 012541:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039G02Sequence583012541 (7)emb|CBI16564.3|1e-25unnamed protein product [Vitis vinifera]
JMSF008C18Sequence286012541 (7)601012541 (7)ref|XP_006413202.1|3e-04hypothetical protein EUTSA_v10025833mg [Eutrema salsugineum] gb|ESQ54655.1| hypo
JMSF010I15Sequence347012541 (7)ref|XP_009781177.1|49.7PREDICTED: uncharacterized protein LOC104230136 [Nicotiana sylvestris]346012541 (7)
JMSF033I03Sequence672012541 (7)ref|XP_009781177.1|269PREDICTED: uncharacterized protein LOC104230136 [Nicotiana sylvestris]660012541 (7)emb|CDP18571.1|1e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF010I15- CAATTTACTC
                      ____________________________________________________________
consensus CAATTTACTC
 
. : . : . : . : . : . :
JMSF008C18- ACCGGTAATACATTAGTCCGCGAATGTTATCCACAACGGTTTCAAACTCC
JMSF010I15- CTCGGAAAGCACCGGTAATACATTAGTCCGCGAATGTTATCCACAACGGTTTCAAACTCC
JMSF033I03- GGTTTCAAACTCC
                      ____________________________________________________________
consensus CTCGGAAAGCACCGGTAATACATTAGTCCGCGAATGTTATCCACAACGGTTTCAAACTCC
 
. : . : . : . : . : . :
JMSF008C18- AGTCTGCACTGCCTTCCGCTGTAATCAATCCCGGAGAAGAAGCGGAGCAAATGCCGGCGG
JMSF010I15- AGTCTGCACTGCCTTCCGCTGTAATCAATCCCGGAGAAGAAGCGGAGCAAATGCCGGCGG
JMSF033I03- AGTCTGCACTGCCTTCCGCTGTAATCAATCCCGGAGAAGAAGCGGAGCAAATGCCGGCGG
                      ____________________________________________________________
consensus AGTCTGCACTGCCTTCCGCTGTAATCAATCCCGGAGAAGAAGCGGAGCAAATGCCGGCGG
 
. : . : . : . : . : . :
JMSF008C18- CGACTTCCTTTCTCAGCTCTTCGGCCGGAGCTTCGCACCTCCCCTTCTCCCTCGTAGTAA
JMSF010I15- CGACTTCCTTTCTCAGCTCTTCGGCCGGAGCTTCGCACCTCCCCTTCTCCCTCGTAGTAA
JMSF033I03- CGACTTCCTTTCTCAGCTCTTCGGCCGGAGCTTCGCACCTCCCCTTCTCCCTCGTAGTAA
                      ____________________________________________________________
consensus CGACTTCCTTTCTCAGCTCTTCGGCCGGAGCTTCGCACCTCCCCTTCTCCCTCGTAGTAA
 
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JMSF008C18- TCTCTTCTTCTTCTTCTTCCTCCACCCTAAAACCCCACGTGGGGTTTATCTTCAATTCAC
JMSF010I15- TCTCTTCTTCTTCTTCTTCCTCCACCCTAAAACCCCACGTGGGGTTTATCTTCAATTCAC
JMSF033I03- TCTCTTCTTCTTCTTCTTCCTCCACCCTAAAACCCCACGTGGGGTTTATCTTCAATTCAC
                      ____________________________________________________________
consensus TCTCTTCTTCTTCTTCTTCCTCCACCCTAAAACCCCACGTGGGGTTTATCTTCAATTCAC
 
. : . : . : . : . : . :
JMSF008C18- TCCCGAAATGCCCACCCCGCTTGCTCTTCTCTTCCCCCCACGCCGCCACCG
JMSF010I15- TCCCGAAATGCCCACCCCGCTTGCTCTTCTCTTCCCCCCACGCCGCCACCGCCGGNAGAA
JMSF033I03- TCCCGAAATGCCCACCCCGCTTGCTCTTCTCTTCCCCCCACGCCGCCACCGCCGGCAGAA
                      ____________________________________________________________
consensus TCCCGAAATGCCCACCCCGCTTGCTCTTCTCTTCCCCCCACGCCGCCACCGCCGGCAGAA
 
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JMSF010I15- CCTCTCTCCTCCTCCGCCCCTCGGCTCTCGNCGTCGA
JMSF033I03- CCTCTCTCCTCCTCCGCCCCTCGGCTCTCGCCGTCGACGACGCTCTTGGGCAGTCCGCCG
                      ____________________________________________________________
consensus CCTCTCTCCTCCTCCGCCCCTCGGCTCTCGCCGTCGACGACGCTCTTGGGCAGTCCGCCG
 
. : . : . : . : . : . :
JMSF033I03- ATACGTTCTCGGTGCAGCCCAAGATTGACAAGAGCGGGAGATTTTGCAGCCCCAGGGCGG
                      ____________________________________________________________
consensus ATACGTTCTCGGTGCAGCCCAAGATTGACAAGAGCGGGAGATTTTGCAGCCCCAGGGCGG
 
. : . : . : . : . : . :
JMSF033I03- CCCGGGAGCTTGCTCTAATGACTCTCTACGCCTCGTGTCTAGAAGGGACTGATCCCGTAA
                      ____________________________________________________________
consensus CCCGGGAGCTTGCTCTAATGACTCTCTACGCCTCGTGTCTAGAAGGGACTGATCCCGTAA
 
. : . : . : . : . : . :
JMSF033I03- GGCTTTTCGAGAAGAGGTTGACCATTAGAAGAGAACCTGGCTATGAATTTGATAAAGAGT
                      ____________________________________________________________
consensus GGCTTTTCGAGAAGAGGTTGACCATTAGAAGAGAACCTGGCTATGAATTTGATAAAGAGT
 
. : . : . : . : . : . :
JMSF033I03- GTTTAATGAAATATAACCATATGAGCTTTGGAGGGCCACCGGTGACAACCGAGACACTGG
                      ____________________________________________________________
consensus GTTTAATGAAATATAACCATATGAGCTTTGGAGGGCCACCGGTGACAACCGAGACACTGG
 
. : . : . : . : . : . :
JMSF033I03- AGGAAGCTGATCAGCTTGAGCTCAGTGATGAAAAGGAGTCTGAAGTTGAAGCAGAAGTTC
rJMSF033I03+ AGTGATGAAAAGGAGTNTGAAGTTGAAGCAGAAGTTN
                      ____________________________________________________________
consensus AGGAAGCTGATCAGCTTGAGCTCAGTGATGAAAAGGAGTCTGAAGTTGAAGCAGAAGTTC
 
. : . : . : . : . : . :
JMSF033I03- TTTCAGCACCCCCGAAGTTAGTTTACAGCAAACTAATTTTACGCTTCACCCGGAA
rJMSF033I03+ TTTCAGCNCCCCCGAAGTTAGTTTACNGCAAACTAATTTTNCGCTTCCCCCGGAAACTTT
                      ____________________________________________________________
consensus TTTCAGCACCCCCGAAGTTAGTTTACAGCAAACTAATTTTACGCTTCCCCCGGAAACTTT
 
. : . : . : . : . : . :
rJMSF033I03+ TGGTTGCAGTTGCCGAGAAATGGGACNGTCATGTGCTNGTAANTGATAAAGTTGCCCCTC
                      ____________________________________________________________
consensus TGGTTGCAGTTGCCGAGAAATGGGACNGTCATGTGCTNGTAANTGATAAAGTTGCCCCTC
 
. : . : . : . : . : . :
rJMSF033I03+ NCAATTGGAAGAGTGAACCGGCTGGAAGAATNTTGGAACTTTNGATTNTTCNTTTGGCAA
                      ____________________________________________________________
consensus NCAATTGGAAGAGTGAACCGGCTGGAAGAATNTTGGAACTTTNGATTNTTCNTTTGGCAA
 
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rJMSF033I03+ NGTTTGAAATTGCNGTGGNGGGAACTNGGCCCCAAATAGTTNTCAACGNGGCGGTAGATN
rJMSF008C18+ GGCGGTAGATN
rJMFF039G02+ GGTAGATN
                      ____________________________________________________________
consensus NGTTTGAAATTGCNGTGGNGGGAACTNGGCCCCAAATAGTTNTCAACGNGGCGGTAGATN
 
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rJMSF033I03+ TTGCAAAACGGTTNTGTGATGGGGCAGCNCCTNGTATCATCAACGGTTGCCTCNGGACNT
rJMSF008C18+ TTGCAAAACGGTTNTGTGATGGGGCAGCNCCTNGTATCATCAACGGTTGCCTCNGGACNT
rJMFF039G02+ TTGCAAAACGGTTTTGNGATGGGGCAGCCCCTTGTNTCATCAACGGNTNCCTCAGGACAT
                      ____________________________________________________________
consensus TTGCAAAACGGTTTTGTGATGGGGCAGCCCCTTGTATCATCAACGGTTGCCTCAGGACAT
 
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rJMSF033I03+ TTGTCAACGATNTNGGGGGAACTAGCGCTGGCCGAATAACAAACTCNAGCGTTAAGCCGT
rJMSF008C18+ TTGTCAACGATNT-CGGGGAACTAGCGCTGGCCGAATAACAAACTCNAGCGTTAAGCCGT
rJMFF039G02+ TTGTCAACGATTTNGGGGGAACTAGCNCTGGCCGAATAACAAACTCAAGCGTTAAGCNGT
                      ____________________________________________________________
consensus TTGTCAACGATTTNGGGGGAACTAGCGCTGGCCGAATAACAAACTCAAGCGTTAAGCCGT
 
. : . : . : . : . : . :
rJMSF033I03+ CGGTTTTTACCTAGATGCNTTGTCGNGGTCAAGGTNTTCNCCTAACNCCGTGTTGCTGAG
rJMSF008C18+ CGGTTTTTACCNAGATGCNTTGTCGNGGTCAAGGTNTTCNCCNAACNCCGTGTTGCTGAG
rJMFF039G02+ CGGTTTTTNCCTAGANGCNTTGTNGAGGTCAAGGTTTTCNCCTAACNCCGTGTTGCTGAG
                      ____________________________________________________________
consensus CGGTTTTTACCTAGATGCNTTGTCGAGGTCAAGGTTTTCNCCTAACNCCGTGTTGCTGAG
 
. : . : . : . : . : . :
rJMSF033I03+ TGAGCTGTAGCCGTCGAGAGAGAGAGCGCTTATTNTNTCGGGCCNTTTTTACGTAAAGCC
rJMSF008C18+ TGAGCNGTAGCCGTCGAGAGAGAGAGCGCTTATTCTCTCGGGCCNTTTTTACGTAAAGCC
rJMFF039G02+ TGAGCTGTANCNNTNGAGAGAGAGANCGCTTATTNTNTCGGGCCATTTTTNCGTAAANCC
                      ____________________________________________________________
consensus TGAGCTGTAGCCGTCGAGAGAGAGAGCGCTTATTCTCTCGGGCCATTTTTACGTAAAGCC
 
. : . : . : . : . : . :
rJMSF033I03+ CTGGAAGGGCNTGCCGGAATGAAATTNTTGGNGCCNTAACCGGCGATTGCGAGGCGGGGC
rJMSF008C18+ CTGGAAGGGCNTGCCGGAATGAAATTNTTGGNGCCNTAACCGGCGATTGCGNGGCGGGGC
rJMFF039G02+ NTGGAAGGGCANGCCGGAANGAAATTTTTGGNGCCATAACAGGNGATTGNGAGGCGGGGC
                      ____________________________________________________________
consensus CTGGAAGGGCATGCCGGAATGAAATTTTTGGNGCCATAACCGGCGATTGCGAGGCGGGGC
 
. : . : . : . : . : . :
rJMSF033I03+ AAAAAAAAAAAATTATATGTTGAATATAGAGAGCAAGTGTTGTATATGATGATAATGCCC
rJMSF008C18+ AAAAAAAAAAAATTATATGTTGAATATAGAGAGCAAGTGTTGTATATGATGATAATGCCC
rJMFF039G02+ AAAAAAAAAAAATTATATGTTGAATATAGAGAGCAAGTGTTGTATATGATGATAATGCCC
rJMSF010I15+ AAAAAAAAAAAATTATATGTTGAATATAGAGAGCAAGTGTTGTATATGATGATAATGCCC
                      ____________________________________________________________
consensus AAAAAAAAAAAATTATATGTTGAATATAGAGAGCAAGTGTTGTATATGATGATAATGCCC
 
. : . : . : . : . : . :
rJMSF033I03+ TGCTAATAC
rJMSF008C18+ TGCTAATACTGGCTATTGAAACTGGGATTTTTATGATC
rJMFF039G02+ TGCTAATACTGGCTATTGAAACTGGGATTTTTATGATCAATGTTGAATTTCATAGGAACA
rJMSF010I15+ TGCTAATACTGGCTATTGAAACTGGGATTTTTATGATCAATGTTGAATTTCATAGGAACA
                      ____________________________________________________________
consensus TGCTAATACTGGCTATTGAAACTGGGATTTTTATGATCAATGTTGAATTTCATAGGAACA
 
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rJMFF039G02+ TTGGATAAT
rJMSF010I15+ TTGGATAATTGAAGATTTGAAGTGTATTGTTGTTGTGTGTTCTGCTGTCTAAGTAGATAT
                      ____________________________________________________________
consensus TTGGATAATTGAAGATTTGAAGTGTATTGTTGTTGTGTGTTCTGCTGTCTAAGTAGATAT
 
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rJMSF010I15+ ATACAGCTATATCAAGTGATTTCTTCTGTTTTTGCTTTTACCTGTATCTTACTAAACATT
                      ____________________________________________________________
consensus ATACAGCTATATCAAGTGATTTCTTCTGTTTTTGCTTTTACCTGTATCTTACTAAACATT