Contig 012540:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020J02+                                 ATGAAGCAAGGCGATTGTTATGCACTAAATGCCATTT
rJMSF010H20+                                                             ATGCAATTT
                      ____________________________________________________________
consensus                                    ATGAAGCAAGGCGATTGTTATGCACTAAATGCCATTT
 
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rJMSF020J02+          CCTAANTTTGCAAGAAATATCAAGTGCTTAAGCTGTAATGACCTATCCCAAGAAAGGCTA
rJMSF010H20+          CCTAANTTTGCAAGAAATATCAAGTGCTTAAGCTGTAATGACCTATCCCAAGAAAGGCTA
                      ____________________________________________________________
consensus             CCTAANTTTGCAAGAAATATCAAGTGCTTAAGCTGTAATGACCTATCCCAAGAAAGGCTA
 
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rJMSF020J02+          CACAATCTAAGAGCTGAGCAGGATAATCTTCCATTGAAAAAGGGAGATTGGATATGTGAC
rJMSF010H20+          CACAATCTNAGAGCTGAGCAGGATAATCTTCCATTGAAAAAGGGAGATTGGATATGTGAC
                      ____________________________________________________________
consensus             CACAATCTAAGAGCTGAGCAGGATAATCTTCCATTGAAAAAGGGAGATTGGATATGTGAC
 
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rJMSF020J02+          AAATGTAATTTCTTGAACTTTGCAAAGAATACAAGGTGCTTACAGTGTAAAGAGAATCCT
rJMSF010H20+          AAATGTAATTTCTTGAACTTTGCAAAGAATACAAGGTGCTTACAGTGTAAAGAGAATCCT
                      ____________________________________________________________
consensus             AAATGTAATTTCTTGAACTTTGCAAAGAATACAAGGTGCTTACAGTGTAAAGAGAATCCT
 
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rJMSF020J02+          CCAAAGCGGCTACTTCATCCTGGAGAATGGGAATGTGAATCGTGCAATTACATCAATTTC
rJMSF010H20+          CCAAAGCGGCTACTTCATCCTGGAGAATGGGAATGTGAATCGTGCAATTACATCAATTTC
                      ____________________________________________________________
consensus             CCAAAGCGGCTACTTCATCCTGGAGAATGGGAATGTGAATCGTGCAATTACATCAATTTC
 
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rJMSF020J02+          AAGAGAAATGTGGTCTGCTTAAAATGTGATCACAGAAGACCTAGAGCATCAAATTGTGCA
rJMSF010H20+          AAGAGAAATGTGGTCTGCTTAAAATGTGATCACAGAAGACCTAGAGCATCAAATTGTGCA
                      ____________________________________________________________
consensus             AAGAGAAATGTGGTCTGCTTAAAATGTGATCACAGAAGACCTAGAGCATCAAATTGTGCA
 
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rJMSF020J02+          AGTTCTACCTGTTTGTCTGCAAGTTCTAACACAAACAATCATTTTAGTCAGCCTTATCTT
rJMSF010H20+          AGTTCTACCTGTTTGTCTGCAAGTTCTAACACAAACAATCATTTTAGTCAGCCTTATCTT
                      ____________________________________________________________
consensus             AGTTCTACCTGTTTGTCTGCAAGTTCTAACACAAACAATCATTTTAGTCAGCCTTATCTT
 
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rJMSF020J02+          GGCACAGAGAAACAACTGGGAGATGAATTTAACAAGCCAAAATTTGTTAAGGATGACGGT
rJMSF010H20+          GGCACAGAGAAACAACTGGGAGATGAATTTAACAAGCCAAAATTTGTTAAGGATGACGGT
                      ____________________________________________________________
consensus             GGCACAGAGAAACAACTGGGAGATGAATTTAACAAGCCAAAATTTGTTAAGGATGACGGT
 
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rJMSF020J02+          GAATATCCTGATGACTCAGTGTTATGTAATCATGAGATTGGATATGTAGATTTCCCCATT
rJMSF010H20+          GAATATCCTGATGACTCAGTGTTATGTAATCATGAGATTGGATATGTAGATTTCCCCATT
                      ____________________________________________________________
consensus             GAATATCCTGATGACTCAGTGTTATGTAATCATGAGATTGGATATGTAGATTTCCCCATT
 
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rJMSF020J02+          TTAGGAGGTAAAAGTGATCTTTCTCGGAATGAACAAAAGCGGGAGAAATGGAAAAGGGAG
rJMSF010H20+          TTAGGAGGTAAAAGTGATCTTTCTCGGAATGAACAAAAGCGGGAGAAATGGAAAAGGGAG
                      ____________________________________________________________
consensus             TTAGGAGGTAAAAGTGATCTTTCTCGGAATGAACAAAAGCGGGAGAAATGGAAAAGGGAG
 
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rJMSF020J02+          ATGACAGAGAAGAGCACAAAAGGTGCAAAAGCAAAAGAGAAAGCCCATGAATTCAAATCC
rJMSF010H20+          ATGACAGAGAAGAGCACAAAAGGTGCAAAGGCAAAAGAGAAAGCCCATGAATTCAAATCC
                      ____________________________________________________________
consensus             ATGACAGAGAAGAGCACAAAAGGTGCAAAGGCAAAAGAGAAAGCCCATGAATTCAAATCC
 
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rJMSF020J02+          TGCTTCGTTGACAGCAGCAAGCATTTCCAGCTTACTGATGATGAAGAAATGGCTGACTGG
rJMSF010H20+          TGCTTCGTTGACAGCAGCAAGCATTTCCAGCTTACTGATGATGAAGAAATGGCTGACTGG
                      ____________________________________________________________
consensus             TGCTTCGTTGACAGCAGCAAGCATTTCCAGCTTACTGATGATGAAGAAATGGCTGACTGG
 
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rJMSF020J02+          TTTGGGCAATGAAACTATTCAAAATGCCATACGACTTGCTTCGAAACAGTAAGAGCTTGA
rJMSF010H20+          TTTGGGCAATGAAACTATTCAAAATGCCATACGACTTGCTTCGAAACAGTAAGAGCTTGA
                      ____________________________________________________________
consensus             TTTGGGCAATGAAACTATTCAAAATGCCATACGACTTGCTTCGAAACAGTAAGAGCTTGA
 
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rJMSF020J02+          TATACTGCATTTTAACGAAGTTGATTACTTAAAACTGTCAGCCAAATA            
rJMSF010H20+          TATACTGCATTTTAACGAAGTTGATTACTTAAAACTGTCAGCCAAATATCATGCAAATGT
                      ____________________________________________________________
consensus             TATACTGCATTTTAACGAAGTTGATTACTTAAAACTGTCAGCCAAATATCATGCAAATGT