| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004D17 | Sequence | 356 | 010319 (3) | ref|XP_009777886.1| | 9e-25 | PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref| | 281 | 012538 (3) | ref|XP_006349909.1| | 7e-32 | PREDICTED: apyrase 2 isoform X1 [Solanum tuberosum] |
| JMSF010E24 | Sequence | 343 | 006419 (3) | ref|XP_009793993.1| | 3e-32 | PREDICTED: apyrase-like [Nicotiana sylvestris] | 768 | 012538 (3) | ref|XP_004247967.1| | 2e-86 | PREDICTED: apyrase-like [Solanum lycopersicum] |
| JMSF027C17 | Sequence | 664 | 006419 (3) | gb|AAQ10658.1| | 8e-95 | apyrase 2 [Solanum tuberosum] gb|ABV26544.1| apyrase 2 [Solanum tuberosum] | 744 | 012538 (3) | ref|XP_004247967.1| | 7e-87 | PREDICTED: apyrase-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF027C17+ CCCAATACTATCTCTATGTTCACAGTTATTTGAACTATGGACAATTAGC
rJMSF010E24+ CCAATACTATCTNTATGTTCACAGTTATTTGAACTATGGACAATTAGC
____________________________________________________________
consensus CCCAATACTATCTCTATGTTCACAGTTATTTGAACTATGGACAATTAGC
. : . : . : . : . : . :
rJMSF027C17+ AAGCCGAGCTGAGATATTCAAGGCTTCAGGAAACTCTACCAACCCTTGTGTTTTAGAAGG
rJMSF010E24+ AAGCCGAGCTGAGATATTCAAGGCTTCAGGAAACTCTACCAACCCTTGTGTTTTAGAAGG
____________________________________________________________
consensus AAGCCGAGCTGAGATATTCAAGGCTTCAGGAAACTCTACCAACCCTTGTGTTTTAGAAGG
. : . : . : . : . : . :
rJMSF027C17+ TTATGATGGTTACTACACATACAATGATGTCTCGTACAAAGTTACAGCCCCACCAAATGG
rJMSF010E24+ TTATGATGGTTACTACACATACAATGATGTCTCGTACAAAGTTACAGCCCCACCAAATGG
____________________________________________________________
consensus TTATGATGGTTACTACACATACAATGATGTCTCGTACAAAGTTACAGCCCCACCAAATGG
. : . : . : . : . : . :
rJMSF027C17+ TTCAAGCTTGAAGAATTGCAGGAAATTAGCCAGAAAAGTGGTTGATTTTAGGGCACCCTG
rJMSF010E24+ TTCAAGCTTGAAGAATTGCAGGAAATTAGCCAGAAAAGTGGTTGATTTTAGGGCACCCTG
____________________________________________________________
consensus TTCAAGCTTGAAGAATTGCAGGAAATTAGCCAGAAAAGTGGTTGATTTTAGGGCACCCTG
. : . : . : . : . : . :
rJMSF027C17+ TAAGTATCCGAATTGCACATTCAATGGGGTGTGGAGTGGTGGAGGAGGGGCTGGAATGGA
rJMSF010E24+ TAAGTATCCGAATTGCACATTCAATGGGGTGTGGAGTGGTGGAGGAGGGGCTGGAATGGA
____________________________________________________________
consensus TAAGTATCCGAATTGCACATTCAATGGGGTGTGGAGTGGTGGAGGAGGGGCTGGAATGGA
. : . : . : . : . : . :
rJMSF027C17+ GAATGTCGACATTTCGTCATATTTCTATGATATAGCCATTGATGTGGGTATTATTGACGA
rJMSF010E24+ GAATGTCGACATTTCGTCATATTTCTATGATATAGCCATTGATGTGGGTATTATTGACGA
____________________________________________________________
consensus GAATGTCGACATTTCGTCATATTTCTATGATATAGCCATTGATGTGGGTATTATTGACGA
. : . : . : . : . : . :
rJMSF027C17+ AGGAAAGGCATCTAAAATAGTTAAGCCAAGATCATTCCTAGTGGCAGCAAAGTTAGCTTG
rJMSF004D17+ CAAGATCANTCCTAGTGGCAGCAAAGTTAGCTTG
rJMSF010E24+ AGGAAAGGCATCTAAAATAGTTAAGCCAAGATCATTCCTAGTGGCAGCAAAGTTAGCTTG
____________________________________________________________
consensus AGGAAAGGCATCTAAAATAGTTAAGCCAAGATCATTCCTAGTGGCAGCAAAGTTAGCTTG
. : . : . : . : . : . :
rJMSF027C17+ TGAAACTAAATTTGAAGATGTGAAGTCTATATTTCCTAATGCAGTGGAAAAAGATTATCC
rJMSF004D17+ TGAAACTAAATTNGAAGATGTGAAGTCTACATTTCCTAATGCAGTGGAAAAAGATTATCC
rJMSF010E24+ TGAAACTAAATTTGAAGATGTGAAGTCTACATTTCCTAATGCAGTGGAAAAAGATTATCC
____________________________________________________________
consensus TGAAACTAAATTTGAAGATGTGAAGTCTACATTTCCTAATGCAGTGGAAAAAGATTATCC
. : . : . : . : . : . :
rJMSF027C17+ ATACTTATGCATGGATTTGGTGTACCAATACACATTGCTCGTGGATGGACTTGGCCTACA
rJMSF004D17+ ATACTTATGCANGGATTTGGTGTACCAATACACATNGCTCGTGGATGGACTTGGCCTACA
rJMSF010E24+ ATACTTATGCATGGATTTGGTGTACCAATACACATTGCTCGTGGATGGACTTGGCCTACA
____________________________________________________________
consensus ATACTTATGCATGGATTTGGTGTACCAATACACATTGCTCGTGGATGGACTTGGCCTACA
. : . : . : . : . : . :
rJMSF027C17+ CCCTTACAAGGAGATTACGTTGATGAAGAAAGTTGAGTACAAAAACTACATGGTTGAAGC
rJMSF004D17+ CCCTTNCAAGGAGATTACGNTGATGAAGAAAGTTGAGTACAAAAACTACATGGTTGAAGC
rJMSF010E24+ CCCTTACAAGGAGATTACGTTGATGAAGAAAGTTGAGTACAAAAACTACATGGTTGAAGC
____________________________________________________________
consensus CCCTTACAAGGAGATTACGTTGATGAAGAAAGTTGAGTACAAAAACTACATGGTTGAAGC
. : . : . : . : . : . :
rJMSF027C17+ AGCTTGGCCTCTTGGTTGCGCCATTGACGTCATCTCATCATCTTCTGCTAACAACCTATT
rJMSF004D17+ AGCTTGGCCTCTTGGTTGCGCCATTGACGTCATCTCATCATCT
rJMSF010E24+ AGCTTGGCCTCTTGGTTGCGCCATTGACGTCATCTCATCATCTTCTGCTAACAACCTATT
____________________________________________________________
consensus AGCTTGGCCTCTTGGTTGCGCCATTGACGTCATCTCATCATCTTCTGCTAACAACCTATT
. : . : . : . : . : . :
rJMSF027C17+ ATCCAAATATTAAGTTGGTCTGATCTTCTAATTAAGTAGTACTAATAATGCTTTAGCTTT
rJMSF010E24+ ATCCAAATATTAAGTTGGTCTGATCTTCTAATTAAGTAGTACTAATAATGCTTTAGCTTT
____________________________________________________________
consensus ATCCAAATATTAAGTTGGTCTGATCTTCTAATTAAGTAGTACTAATAATGCTTTAGCTTT
. : . : . : . : . : . :
rJMSF027C17+ GGTACGGTTTTATGCCAAAGTGGACTGACGATCT
rJMSF010E24+ GGTACGGTTTTATGCCAAAGTGGACTGACGATCTTGTGCACCTGTTGCCAACAATAAATG
____________________________________________________________
consensus GGTACGGTTTTATGCCAAAGTGGACTGACGATCTTGTGCACCTGTTGCCAACAATAAATG