Contig 012536:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN035L12+                                                                  CAGAA
                      ____________________________________________________________
consensus                                                                    CAGAA
 
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JMFN035L12+           AGCGGAAGCTAATATAATCCGGGAAAGGTGTTATGCCACACCCATAAAACTATGGGTGCA
                      ____________________________________________________________
consensus             AGCGGAAGCTAATATAATCCGGGAAAGGTGTTATGCCACACCCATAAAACTATGGGTGCA
 
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JMFN035L12+           CAGGCTAAGTTTACAAAATCCATCATAACAACACATTGTCTAAGGCACACAGGCCACATC
                      ____________________________________________________________
consensus             CAGGCTAAGTTTACAAAATCCATCATAACAACACATTGTCTAAGGCACACAGGCCACATC
 
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JMFN035L12+           TATCTAAGGCTCACAGGCCCAAATCTAAGCAGAGGGAAAAACAAAGCCACGCTAACTAGA
                      ____________________________________________________________
consensus             TATCTAAGGCTCACAGGCCCAAATCTAAGCAGAGGGAAAAACAAAGCCACGCTAACTAGA
 
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JMFN035L12+           GTCTACATCTAGCGCGCTCTCCAATCTAAGCAAAACCTTTGTAGACTACA-ACTTCTCCT
rJMSF010D06-                       GCGCTCTCCAATCTAGGCAAAACCTTTGTAGACTACAGACTTCTCCT
                      ____________________________________________________________
consensus             GTCTACATCTAGCGCGCTCTCCAATCTAGGCAAAACCTTTGTAGACTACAGACTTCTCCT
 
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JMFN035L12+           TTACACCCTCCTAAGCCTCTTCTTAGAGTTCCTCTTCTCCACCAATAATATAGTTTGAGG
rJMSF010D06-          TTACACCCTCCTAAGCCTCTTCTTAGAGTTCCTCTTCNCCACCAATAATATGGTTTGAGG
                      ____________________________________________________________
consensus             TTACACCCTCCTAAGCCTCTTCTTAGAGTTCCTCTTCTCCACCAATAATATGGTTTGAGG
 
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JMFN035L12+           CTAAAAATTGAGGCTTACGCCTCGAGGCTTATGACTCGCCTCAAAATACAAAACGCTTCA
rJMSF010D06-          CTAAGAATTGAGGCTTACGCCTCGAGGCTTATGACTCGCCTCAAANTACAAAACGCTTNA
                      ____________________________________________________________
consensus             CTAAGAATTGAGGCTTACGCCTCGAGGCTTATGACTCGCCTCAAAATACAAAACGCTTCA
 
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JMFN035L12+           AGGCACGCCTTCGCCTTTTAAAACCTTGCACCCATCCTCCTCATTGTCCCGCCTGCTAGT
rJMSF010D06-          AGGCACGCCTTCGCCTTTTAAAACCTTGCACCCATCCTCCTCATTGTCCCGCCTGCTAGC
                      ____________________________________________________________
consensus             AGGCACGCCTTCGCCTTTTAAAACCTTGCACCCATCCTCCTCATTGTCCCGCCTGCTAGT
 
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JMFN035L12+           ATTAGTCTTCCGAGCTCGGTTCCA                                    
rJMSF010D06-          ATTANTCTTCCGAGCTCGGTTCCATATCCCATCAAGAACAATAAAAGCAAACGAAAATAA
                      ____________________________________________________________
consensus             ATTAGTCTTCCGAGCTCGGTTCCATATCCCATCAAGAACAATAAAAGCAAACGAAAATAA