Contig 012535:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036N12Sequence454012535 (5)
JMFN042C13Sequence501012535 (5)
JMFS068H10Sequence631012535 (5)dbj|BAF46296.1|1e-05cytochrome P450 [Ipomoea nil]
JMSF010A22Sequence325001875 (3)dbj|BAF46296.1|4e-13cytochrome P450 [Ipomoea nil]771012535 (5)dbj|BAF46296.1|1e-13cytochrome P450 [Ipomoea nil]
JMSF019N03Sequence506001875 (3)dbj|BAF46296.1|4e-26cytochrome P450 [Ipomoea nil]763012535 (5)dbj|BAF46296.1|1e-13cytochrome P450 [Ipomoea nil]

Alignment

This contig is upended


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JMFN036N12+                                             ATGTCTTTATTGATCACGGTAAAGGC
JMFN042C13+                                  AAAGCAAGTAAATGTCTTTATTGATCACGGTAAAGGC
                      ____________________________________________________________
consensus                                    AAAGCAAGTAAATGTCTTTATTGATCACGGTAAAGGC
 
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JMFN036N12+           CCTAAGTACAATCTACTTGGTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
JMFN042C13+           CCTAAGTACAATCTACTTGGTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
JMFS068H10+                              GTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
rJMSF019N03-                   AATCTACTTGGTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
rJMSF010A22-                            GGTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
                      ____________________________________________________________
consensus             CCTAAGTACAATCTACTTGGTTGCTCTGAGTACCGACTGACTGCGGTCGGGATTCTCTAA
 
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JMFN036N12+           CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
JMFN042C13+           CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
JMFS068H10+           CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
rJMSF019N03-          CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
rJMSF010A22-          CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
                      ____________________________________________________________
consensus             CAGCAACCTATCGATCGTCCAAAAGTCCCCTACACTGTAGCTACTGTGGGTATTTATAGC
 
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JMFN036N12+           CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
JMFN042C13+           CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
JMFS068H10+           CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
rJMSF019N03-          CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
rJMSF010A22-          CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
                      ____________________________________________________________
consensus             CGCTATGCCGGGGACAGGATTCCAGCCGTTCGGCATGCCCTCCACGTAGCCACCACGTGT
 
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JMFN036N12+           CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
JMFN042C13+           CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
JMFS068H10+           CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
rJMSF019N03-          CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
rJMSF010A22-          CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
                      ____________________________________________________________
consensus             CATCCTCCCGGGTGCCCTGTCTGTCGTCGTAGAGAGTCGCCACGTGTCTTTCGTCAGCTC
 
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JMFN036N12+           TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCCGGTCGGC
JMFN042C13+           TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCC-CTCGGC
JMFS068H10+           TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCCGGTCGGC
rJMSF019N03-          TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCCGGTCGGC
rJMSF010A22-          TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCCGGTCGGC
                      ____________________________________________________________
consensus             TCTTGCCAAAGGGCTACCGCTCGGCGGTCGACACCGTCGCTCGGGCAACTCCCGGTCGGC
 
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JMFN036N12+           TCCCGACCGGGTTCTTCACAAGCCCCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
JMFN042C13+           TCCCGACCGGGTTCTTCACAAGGAGCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
JMFS068H10+           TCCCGACCGGGTTCTTCACAAGGAGCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
rJMSF019N03-          TCCCGACCGGGTTCTTCACAAGGAGCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
rJMSF010A22-          TCCCGACCGGGTTCTTCACAAGGAGCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
                      ____________________________________________________________
consensus             TCCCGACCGGGTTCTTCACAAGGAGCCCGACCTGCTACCTGCAAAGACAAAGAGAAAAAG
 
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JMFN036N12+           ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
JMFN042C13+           ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
JMFS068H10+           ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
rJMSF019N03-          ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
rJMSF010A22-          ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
                      ____________________________________________________________
consensus             ACAAAGGCTTCTCGGTCGTGGTGAAGCTATGTCGGTCGGGATATTCCCTATCAAATATAT
 
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JMFN036N12+           AACTTTAA                                                    
JMFN042C13+           AACTTTAAGCGTAAGCGAATAAGTTATTTATATAAGTAAATGCGT               
JMFS068H10+           AACTTTAAGCGTAAGCGAATAAGTTATTTATATAAGTAAATGCGTGTATAAATGATATAT
rJMSF019N03-          AACTTTAAGCGTAAGCGAATAAGTTATTTATATAAGTAAATGCGTGTATAAATGATATAT
rJMSF010A22-          AACTTTAAGCGTAAGCGAATAAGTTATTTATATAAGTAAATGCGTGTATAAATGATATAT
                      ____________________________________________________________
consensus             AACTTTAAGCGTAAGCGAATAAGTTATTTATATAAGTAAATGCGTGTATAAATGATATAT
 
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JMFS068H10+           AGAAGTTGATGATAAGTAAAATAATATGATAATGATTGTAATTATAGTAATGATGATTGA
rJMSF019N03-          AGAAGTTGATGATAAGTAAAATAATATGATAATGATTGTAATTATAGTAATGATGATTGA
rJMSF010A22-          AGAAGTTGATGATAAGTAAAATAATATGATAATGATTGTAATTATAGTAATGATGATTGA
                      ____________________________________________________________
consensus             AGAAGTTGATGATAAGTAAAATAATATGATAATGATTGTAATTATAGTAATGATGATTGA
 
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JMFS068H10+           ATCACTAGGAGAAATTGAATGGGAATCCACCACTTGAAACTCATAATGGTGTAGGATGAT
rJMSF019N03-          ATCACTAGGAGAAATTGAATGGGAATCCACCACTTGAAACTCATAATGGTGTAGGATGAT
rJMSF010A22-          ATCACTAGGAGAAATTGAATGGGAATCCACCACTTGAAACTCATAATGGTGTAGGATGAT
                      ____________________________________________________________
consensus             ATCACTAGGAGAAATTGAATGGGAATCCACCACTTGAAACTCATAATGGTGTAGGATGAT
 
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JMFS068H10+           TGCAGGAATCATTTTCATCTGAACCAAACCCATTTCTTTACCTAAACAAG          
rJMSF019N03-          TGCAGGAATCATTTTCATCTGAACCAAACCCATTTCTTTACCTAAACAAGTCCTAGGTCC
rJMSF010A22-          TGCAGGAATCATTTTCATCTGAACCAAACCCATTTCTTTACCTAAACAAGTCCTAGGTCC
                      ____________________________________________________________
consensus             TGCAGGAATCATTTTCATCTGAACCAAACCCATTTCTTTACCTAAACAAGTCCTAGGTCC
 
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rJMSF019N03-          GGCGTTGAATGCGGGAAACTTGT                                     
rJMSF010A22-          GGCGTTGAATGCGGGAAACTTGTTGGAAGATAAAGAGAGACACTAGAGGGACTCCTATGT
                      ____________________________________________________________
consensus             GGCGTTGAATGCGGGAAACTTGTTGGAAGATAAAGAGAGACACTAGAGGGACTCCTATGT
 
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rJMSF010A22-          AATTTCCATAGCTTCTGTTGCAACCGTTCTTAGTCTCACCATTTATATTGTATGCTTCCA
                      ____________________________________________________________
consensus             AATTTCCATAGCTTCTGTTGCAACCGTTCTTAGTCTCACCATTTATATTGTATGCTTCCA