Contig 012530:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039M10+                                         ACGAGTTGAGGCTGTGGGANTCGATTGTT
                      ____________________________________________________________
consensus                                            ACGAGTTGAGGCTGTGGGANTCGATTGTT
 
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rJMSF039M10+          GATGAGGCTTCAAGAATGCAGTCTGTACTAAGAGATGAATCTCTGGGCCATGGAGCAATA
                      ____________________________________________________________
consensus             GATGAGGCTTCAAGAATGCAGTCTGTACTAAGAGATGAATCTCTGGGCCATGGAGCAATA
 
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rJMSF039M10+          TTTTGTGTCACCCGTGTATGCAAAGATTGAATCCGATGATTATAGCGATTACTTCAGAAC
rJMSF009J16+                                                                  GAAC
                      ____________________________________________________________
consensus             TTTTGTGTCACCCGTGTATGCAAAGATTGAATCCGATGATTATAGCGATTACTTCAGAAC
 
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rJMSF039M10+          TGAGATGATGTATCAGATAGGACTTGATCAAGAACCCAACAATTCCATGTTACTCGCAAA
rJMSF009J16+          TGAGATGATGTATCAGATAGGACTTGATCAAGAACCCAACAATTCCATGTTACTCGCAAA
                      ____________________________________________________________
consensus             TGAGATGATGTATCAGATAGGACTTGATCAAGAACCCAACAATTCCATGTTACTCGCAAA
 
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rJMSF039M10+          TTATGCTCAGTTTCTTCACCTAGTTGCCCAAGACTATGACAGAGCGGAGGAATACTTCAA
rJMSF009J16+          TTATGCTCAGTTTCTTCACCTAGTTGCCCAAGACTATGACAGAGCGGAGGAATACTTCAA
                      ____________________________________________________________
consensus             TTATGCTCAGTTTCTTCACCTAGTTGCCCAAGACTATGACAGAGCGGAGGAATACTTCAA
 
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rJMSF039M10+          GAGAGCAACGGGGGTAGAACCGAGGGATGCTGATGCACTGAACAAATACGCGACATTTCT
rJMSF009J16+          GAGAGCAACGGGGGTAGAACCGAGGGATGCTGATGCACTGAACAAATACGCGACATTTCT
                      ____________________________________________________________
consensus             GAGAGCAACGGGGGTAGAACCGAGGGATGCTGATGCACTGAACAAATACGCGACATTTCT
 
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rJMSF039M10+          TTGGCAGGTGAGGAAGGACCTTTGGGGTGCTGAGCAAAGATACCAAGATGCTGTTGCTGC
rJMSF009J16+          TTGGCAGGTGAGGAAGGACCTTTGGGGTGCTGAGCAAAGATACCAAGATGCTGTTGCTGC
                      ____________________________________________________________
consensus             TTGGCAGGTGAGGAAGGACCTTTGGGGTGCTGAGCAAAGATACCAAGATGCTGTTGCTGC
 
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rJMSF039M10+          TGCTGAGCCTAACAACTCCTTCTATGCAGCATGCTATGCTCATTTCCTGTGGAGCACTGG
rJMSF009J16+          TGCTGAGCCTAACAACTCCTTCTATGCAGCATGCTATGCTCATTTCCTGTGGAGCACTGG
                      ____________________________________________________________
consensus             TGCTGAGCCTAACAACTCCTTCTATGCAGCATGCTATGCTCATTTCCTGTGGAGCACTGG
 
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rJMSF039M10+          CGGCGAGGACACTTGCTTCCCTCTCGACACCAGCAACGAATGATGTTTAATCCCCCAACC
rJMSF009J16+          CGGCGAGGACACTTGCTTCCCTCTCGACACCAGCAACGAATGATGTTTAATCCCCCAACC
                      ____________________________________________________________
consensus             CGGCGAGGACACTTGCTTCCCTCTCGACACCAGCAACGAATGATGTTTAATCCCCCAACC
 
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rJMSF039M10+          GAAACATGGGAAAATAGCAGCACGTAAGATGTAGGATACGCGATACACAACACTGTTTTT
rJMSF009J16+          GAAACATGGGAAAATAGCAGCACGTAAGATGTAGGATACGCGATACACAACACTGTTTTT
                      ____________________________________________________________
consensus             GAAACATGGGAAAATAGCAGCACGTAAGATGTAGGATACGCGATACACAACACTGTTTTT
 
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rJMSF039M10+          AATCCTGTTATGAACTTGTTCATAATCAATCTGTAGCTAGCCTTGAAGGGGATGGAGTCC
rJMSF009J16+          AATCCTGTTATGAACTTGTTCATAATCAATCTGTAGCTAGCCTTGAAGGGGATGGAGTCC
                      ____________________________________________________________
consensus             AATCCTGTTATGAACTTGTTCATAATCAATCTGTAGCTAGCCTTGAAGGGGATGGAGTCC
 
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rJMSF039M10+          ATGTCCATGGCTTAAAAGTTAAAACTGTTTGGTCATTGGCTTCTTCTGTCACCTGAAGAG
rJMSF009J16+          ATGTCCATGGCTTAAAAGTTAAAACTGTTTGGTCATTGGCTTCTTCTGTCACCTGAAGAG
                      ____________________________________________________________
consensus             ATGTCCATGGCTTAAAAGTTAAAACTGTTTGGTCATTGGCTTCTTCTGTCACCTGAAGAG
 
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rJMSF039M10+          CTGTGGTGGAGGAGAATGGGATTCTGGTGGTTCTTAAGAGTTCAAGAAAAGAAGGTTTGT
rJMSF009J16+          CTGTGGTGGAGGAGAATGGGATTCTGGTGGTTCTTAAGAGTTCAAGAAAAGAAGGTTTGT
                      ____________________________________________________________
consensus             CTGTGGTGGAGGAGAATGGGATTCTGGTGGTTCTTAAGAGTTCAAGAAAAGAAGGTTTGT
 
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rJMSF039M10+          TTGTTCTTTTCACAACAGCCTTACTCCATATTGCAGGAATGCAGGGCCAGAAACAAGAAG
rJMSF009J16+          TTGTTCTTTTCACAACAGCCTTACTCCATATTGCAGGAATGCAGGGCCAGAAACAAGAAG
                      ____________________________________________________________
consensus             TTGTTCTTTTCACAACAGCCTTACTCCATATTGCAGGAATGCAGGGCCAGAAACAAGAAG
 
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rJMSF039M10+          ACTGCTTTGTTTGTGTTTCTCTGTATTCTTCTCTTCTTGTTCATCCCTCTTTACTAAAAC
rJMSF009J16+          ACTGCTTTGTTTGTGTTTCTCTGTATTCTTCTCTTCTTGTTCATCCCTCTTTACTAAAAC
                      ____________________________________________________________
consensus             ACTGCTTTGTTTGTGTTTCTCTGTATTCTTCTCTTCTTGTTCATCCCTCTTTACTAAAAC
 
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rJMSF039M10+          TTTATGTTTGAGTCATGTGTTGATTGGTATAGAATCACATGCCCAATTGTAAT       
rJMSF009J16+          TTTATGTTTGAGTCATGTGTTGATTGGTATAGAATCACATGCCCAATTGTAATTAAACTT
                      ____________________________________________________________
consensus             TTTATGTTTGAGTCATGTGTTGATTGGTATAGAATCACATGCCCAATTGTAATTAAACTT