Contig 012529:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009F16Sequence552011487 (2)699012529 (2)ref|XP_003634371.1|4e-90PREDICTED: bifunctional nuclease 2 [Vitis vinifera]
JMSF009I10Sequence418011487 (2)ref|XP_010320400.1|4e-09PREDICTED: bifunctional nuclease 2 [Solanum lycopersicum]778012529 (2)ref|XP_003634371.1|1e-91PREDICTED: bifunctional nuclease 2 [Vitis vinifera]

Alignment

This contig is upended


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rJMFF009F16+                  GTACTGTTGATGGCAGCTGTACGCAACGTACAAATTGCCAGACCAACAATGT
rJMSF009I10+            CCAAGTGTACTGTTGATGGCAGCTGTACGCAACGTACAAATTGCCAGACCAACAATGT
                      ____________________________________________________________
consensus               CCAAGTGTACTGTTGATGGCAGCTGTACGCAACGTACAAATTGCCAGACCAACAATGT
 
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rJMFF009F16+          ATCAAGTCGTGAAGGATATGATTGAGAAGATGGGATATGAGGTAAAACTTGTCCGTGTTA
rJMSF009I10+          ATCAAGTCGTGAAGGATATGATTGAGAAGATGGGATATGAGGTAAAACTTGTCCGTGTTA
                      ____________________________________________________________
consensus             ATCAAGTCGTGAAGGATATGATTGAGAAGATGGGATATGAGGTAAAACTTGTCCGTGTTA
 
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rJMFF009F16+          CAAAGAGAGTACACGAGGCATATTTTGCTCAACTTTATCTCACCAAGCAATTTGGTAACG
rJMSF009I10+          CAAAGAGAGTACACGAGGCATATTTTGCTCAACTTTATCTCACCAAGCAATTTGGTAACG
                      ____________________________________________________________
consensus             CAAAGAGAGTACACGAGGCATATTTTGCTCAACTTTATCTCACCAAGCAATTTGGTAACG
 
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rJMFF009F16+          ATGTTGAGAGTATCAGCTTTGATCTTCGACCTTCTGATGCCATCAACATTGCTGTGAGAT
rJMSF009I10+          ATGTTGAGAGTATCAGCTTTGATCTTCGACCTTCTGATGCCATCAACATTGCTGTGAGAT
                      ____________________________________________________________
consensus             ATGTTGAGAGTATCAGCTTTGATCTTCGACCTTCTGATGCCATCAACATTGCTGTGAGAT
 
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rJMFF009F16+          GCAAGGTGCCAATACAAGTGAACAAATACTTGGCATACAGTGATGGCATGAAGGTGGTCG
rJMSF009I10+          GCAAGGTGCCAATACAAGTGAACAAATACTTGGCATACAGTGATGGCATGAAGGTGGTCG
                      ____________________________________________________________
consensus             GCAAGGTGCCAATACAAGTGAACAAATACTTGGCATACAGTGATGGCATGAAGGTGGTCG
 
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rJMFF009F16+          AGTCTGCAAAGCCATCGGTACATGGTCCTTCAGATGCATCAGTGGTAACGGAGCTGGACA
rJMSF009I10+          AGTCTGCAAAGCCATCGGTACATGGTCCTTCAGATGCATCAGTGGTAACGGAGCTGGACA
                      ____________________________________________________________
consensus             AGTCTGCAAAGCCATCGGTACATGGTCCTTCAGATGCATCAGTGGTAACGGAGCTGGACA
 
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rJMFF009F16+          GACCAACTGCCCAGCCGGGGATTGAGACAAAGGAGTTCATTCTTGTGCGCAACATGCTGA
rJMSF009I10+          GACCAACTGCCCAGCCGGGGATTGAGACAAAGGAGTTCATTCTTGTGCGCAACATGCTGA
                      ____________________________________________________________
consensus             GACCAACTGCCCAGCCGGGGATTGAGACAAAGGAGTTCATTCTTGTGCGCAACATGCTGA
 
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rJMFF009F16+          TCGCTGCAGTAGAGGAACGCTATAAAGATGCAGCTCAATGGAGGGACAAGCTCACTCAAC
rJMSF009I10+          TCGCTGCAGTAGAGGAACGCTATAAAGATGCAGCTCAATGGAGGGACAAGCTCACTCAAC
                      ____________________________________________________________
consensus             TCGCTGCAGTAGAGGAACGCTATAAAGATGCAGCTCAATGGAGGGACAAGCTCACTCAAC
 
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rJMFF009F16+          TCCGTTCCAAGAGGAATTGGACATAGCCAGAATCAGTTGGCAGGGGATGAATTGTGTACA
rJMSF009I10+          TCCGTTCCAAGAGGAATTGGACATAGCCAGAATCAGTTGGCAGGGGATGAATTGTGTACA
                      ____________________________________________________________
consensus             TCCGTTCCAAGAGGAATTGGACATAGCCAGAATCAGTTGGCAGGGGATGAATTGTGTACA
 
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rJMFF009F16+          TAACTCGGACCGTCTGTGAGAACAGATGCGAAGGCTCCTCTTCCTCGATGTGCAAAACCT
rJMSF009I10+          TAACTCGGACCGTCTGTGAGAACAGATGCGAAGGCTCCTCTTCCTCGATGTGCAAAACCT
                      ____________________________________________________________
consensus             TAACTCGGACCGTCTGTGAGAACAGATGCGAAGGCTCCTCTTCCTCGATGTGCAAAACCT
 
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rJMFF009F16+          GTGAATGTGTATAGATAGACTGTAATTCTGGGCAAAAAAACATATATGTAAGGCTATATA
rJMSF009I10+          GTGAATGTGTATAGATAGACTGTAATTCTGGGCAAAAAAACATATATGTAAGGCTATATA
                      ____________________________________________________________
consensus             GTGAATGTGTATAGATAGACTGTAATTCTGGGCAAAAAAACATATATGTAAGGCTATATA
 
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rJMFF009F16+          TAATCCTTGTGATTTCAACTCATGATCATTGATCACTAGTTCAATT              
rJMSF009I10+          TAATCCTTGTGATTTCAACTCATGATCATTGATCACTAGTTCAATTTGTCATTTCCAAGG
                      ____________________________________________________________
consensus             TAATCCTTGTGATTTCAACTCATGATCATTGATCACTAGTTCAATTTGTCATTTCCAAGG
 
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rJMSF009I10+          TTGTCTTTCTCATTTCATGTCTGCAAATTGTTTCTTTGGTTGCTTCCCTTGCTCCACTTT
                      ____________________________________________________________
consensus             TTGTCTTTCTCATTTCATGTCTGCAAATTGTTTCTTTGGTTGCTTCCCTTGCTCCACTTT